-
1
-
-
11144356366
-
Characterization of the human urinary proteome: A method for high-resolution display of urinary proteins on two-dimensional electrophoresis gels with a yield of nearly 1400 distinct protein spots
-
DOI 10.1002/pmic.200300661
-
Pieper, R., Gatlin, C. L., McGrath, A. M., Makusky, A. J., Mondal, M., Seonarain, M., Field, E., Schatz, C. R., Estock, M. A., Ahmed, N., Anderson, N. G., and Steiner, S. (2004) Characterization of the human urinary proteome: a method for high-resolution display of urinary proteins on two-dimensional electrophoresis gels with a yield of nearly 1400 distinct protein spots. Proteomics 4, 1159-1174 (Pubitemid 38445973)
-
(2004)
Proteomics
, vol.4
, Issue.4
, pp. 1159-1174
-
-
Pieper, R.1
Gatlin, C.L.2
McGrath, A.M.3
Makusky, A.J.4
Mondal, M.5
Seonarain, M.6
Field, E.7
Schatz, C.R.8
Estock, M.A.9
Ahmed, N.10
Anderson, N.G.11
Steiner, S.12
-
2
-
-
19944432197
-
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
Ross, P. L., Huang, Y. N., Marchese, J. N., Williamson, B., Parker, K., Hattan, S., Khainovski, N., Pillai, S., Dey, S., Daniels, S., Purkayastha, S., Juhasz, P., Martin, S., Bartlet-Jones, M., He, F., Jacobson, A., and Pappin, D. J. (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 3, 1154-1169
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 1154-1169
-
-
Ross, P.L.1
Huang, Y.N.2
Marchese, J.N.3
Williamson, B.4
Parker, K.5
Hattan, S.6
Khainovski, N.7
Pillai, S.8
Dey, S.9
Daniels, S.10
Purkayastha, S.11
Juhasz, P.12
Martin, S.13
Bartlet-Jones, M.14
He, F.15
Jacobson, A.16
Pappin, D.J.17
-
3
-
-
33750131662
-
Simple urinary sample preparation for proteomic analysis
-
Khan, A., and Packer, N. H. (2006) Simple urinary sample preparation for proteomic analysis. J. Proteome Res. 5, 2824-2838
-
(2006)
J. Proteome Res.
, vol.5
, pp. 2824-2838
-
-
Khan, A.1
Packer, N.H.2
-
4
-
-
30744440918
-
Systematic evaluation of sample preparation methods for gel-based human urinary proteomics: Quantity, quality, and variability
-
DOI 10.1021/pr0502525
-
Thongboonkerd, V., Chutipongtanate, S., and Kanlaya, R. (2006) Systematic evaluation of sample preparation methods for gel-based human urinary proteomics: quantity, quality, and variability. J. Proteome Res. 5, 183-191 (Pubitemid 43100811)
-
(2006)
Journal of Proteome Research
, vol.5
, Issue.1
, pp. 183-191
-
-
Thongboonkerd, V.1
Chutipongtanate, S.2
Kanlaya, R.3
-
5
-
-
40549100987
-
Urine sample preparation and protein profiling by two-dimensional electrophoresis and matrix-assisted laser desorption ionization time of flight mass spectroscopy
-
Zerefos, P. G., and Vlahou, A. (2008) Urine sample preparation and protein profiling by two-dimensional electrophoresis and matrix-assisted laser desorption ionization time of flight mass spectroscopy. Methods Mol. Biol. 428, 141-157
-
(2008)
Methods Mol. Biol.
, vol.428
, pp. 141-157
-
-
Zerefos, P.G.1
Vlahou, A.2
-
6
-
-
0036379687
-
Proteomic analysis of normal human urinary proteins isolated by acetone precipitation or ultracentrifugation
-
Thongboonkerd, V., McLeish, K. R., Arthur, J. M., and Klein, J. B. (2002) Proteomic analysis of normal human urinary proteins isolated by acetone precipitation or ultracentrifugation. Kidney Int. 62, 1461-1469
-
(2002)
Kidney Int.
, vol.62
, pp. 1461-1469
-
-
Thongboonkerd, V.1
McLeish, K.R.2
Arthur, J.M.3
Klein, J.B.4
-
7
-
-
52649094889
-
Optimizing protein recovery for urinary proteomics, a tool to monitor renal transplantation
-
Sigdel, T. K., Lau, K., Schilling, J., and Sarwal, M. (2008) Optimizing protein recovery for urinary proteomics, a tool to monitor renal transplantation. Clin. Transplant. 22, 617-623
-
(2008)
Clin. Transplant.
, vol.22
, pp. 617-623
-
-
Sigdel, T.K.1
Lau, K.2
Schilling, J.3
Sarwal, M.4
-
8
-
-
0015230272
-
Diabetes mellitus in American (Pima) Indians
-
Bennett, P. H., Burch, T. A., and Miller, M. (1971) Diabetes mellitus in American (Pima) Indians. Lancet 2, 125-128
-
(1971)
Lancet
, vol.2
, pp. 125-128
-
-
Bennett, P.H.1
Burch, T.A.2
Miller, M.3
-
9
-
-
33847635745
-
Prediction of diabetic nephropathy using urine proteomic profiling 10 years prior to development of nephropathy
-
Otu, H. H., Can, H., Spentzos, D., Nelson, R. G., Hanson, R. L., Looker, H. C., Knowler, W. C., Monroy, M., Libermann, T. A., Karumanchi, S. A., and Thadhani, R. (2007) Prediction of diabetic nephropathy using urine proteomic profiling 10 years prior to development of nephropathy. Diabetes Care 30, 638-643
-
(2007)
Diabetes Care
, vol.30
, pp. 638-643
-
-
Otu, H.H.1
Can, H.2
Spentzos, D.3
Nelson, R.G.4
Hanson, R.L.5
Looker, H.C.6
Knowler, W.C.7
Monroy, M.8
Libermann, T.A.9
Karumanchi, S.A.10
Thadhani, R.11
-
10
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72, 248-254
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
11
-
-
34848889259
-
The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
Shilov, I. V., Seymour, S. L., Patel, A. A., Loboda, A., Tang, W. H., Keating, S. P., Hunter, C. L., Nuwaysir, L. M., and Schaeffer, D. A. (2007) The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol. Cell. Proteomics 6, 1638-1655
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymour, S.L.2
Patel, A.A.3
Loboda, A.4
Tang, W.H.5
Keating, S.P.6
Hunter, C.L.7
Nuwaysir, L.M.8
Schaeffer, D.A.9
-
12
-
-
0017121692
-
Hierarchical grouping analysis and skeletal materials
-
Alexander, R. W. (1976) Hierarchical grouping analysis and skeletal materials. Am. J. Phys. Anthropol. 45, 39-43
-
(1976)
Am. J. Phys. Anthropol.
, vol.45
, pp. 39-43
-
-
Alexander, R.W.1
-
13
-
-
33646161950
-
Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery
-
Zhou, H., Yuen, P. S., Pisitkun, T., Gonzales, P. A., Yasuda, H., Dear, J. W., Gross, P., Knepper, M. A., and Star, R. A. (2006) Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery. Kidney Int. 69, 1471-1476
-
(2006)
Kidney Int.
, vol.69
, pp. 1471-1476
-
-
Zhou, H.1
Yuen, P.S.2
Pisitkun, T.3
Gonzales, P.A.4
Yasuda, H.5
Dear, J.W.6
Gross, P.7
Knepper, M.A.8
Star, R.A.9
-
14
-
-
35649000519
-
Practical points in urinary proteomics
-
Thongboonkerd, V. (2007) Practical points in urinary proteomics. J. Proteome Res. 6, 3881-3890
-
(2007)
J. Proteome Res.
, vol.6
, pp. 3881-3890
-
-
Thongboonkerd, V.1
-
15
-
-
23944520883
-
HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples
-
Rai, A. J., Gelfand, C. A., Haywood, B. C., Warunek, D. J., Yi, J., Schuchard, M. D., Mehigh, R. J., Cockrill, S. L., Scott, G. B., Tammen, H., Schulz-Knappe, P., Speicher, D. W., Vitzthum, F., Haab, B. B., Siest, G., and Chan, D. W. (2005) HUPO Plasma Proteome Project specimen collection and handling: towards the standardization of parameters for plasma proteome samples. Proteomics 5, 3262-3277
-
(2005)
Proteomics
, vol.5
, pp. 3262-3277
-
-
Rai, A.J.1
Gelfand, C.A.2
Haywood, B.C.3
Warunek, D.J.4
Yi, J.5
Schuchard, M.D.6
Mehigh, R.J.7
Cockrill, S.L.8
Scott, G.B.9
Tammen, H.10
Schulz-Knappe, P.11
Speicher, D.W.12
Vitzthum, F.13
Haab, B.B.14
Siest, G.15
Chan, D.W.16
-
16
-
-
8744231846
-
Establishment of a near-standard two-dimensional human urine proteomic map
-
DOI 10.1002/pmic.200401018
-
Oh, J., Pyo, J. H., Jo, E. H., Hwang, S. I., Kang, S. C., Jung, J. H., Park, E. K., Kim, S. Y., Choi, J. Y., and Lim, J. (2004) Establishment of a near-standard two-dimensional human urine proteomic map. Proteomics 4, 3485-3497 (Pubitemid 39525299)
-
(2004)
Proteomics
, vol.4
, Issue.11
, pp. 3485-3497
-
-
Oh, J.1
Pyo, J.-H.2
Jo, E.-H.3
Hwang, S.-I.4
Kang, S.-C.5
Jung, J.-H.6
Park, E.-K.7
Kim, S.-Y.8
Choi, J.-Y.9
Lim, J.10
-
17
-
-
34250025453
-
Sample preparation and bioinformatics in MALDI profiling of urinary proteins
-
DOI 10.1016/j.jchromb.2007.02.063, PII S1570023207001894
-
Zerefos, P., Prados, J., Kossida, S., Kalousis, A., and Vlahou, A. (2007) Sample preparation and bioinformatics in MALDI profiling of urinary proteins. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 853, 20-30 (Pubitemid 46891340)
-
(2007)
Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences
, vol.853
, Issue.1-2
, pp. 20-30
-
-
Zerefos, P.1
Prados, J.2
Kossida, S.3
Kalousis, A.4
Vlahou, A.5
-
18
-
-
55249088324
-
Optimizing sample handling for urinary proteomics
-
Lee, R. S., Monigatti, F., Briscoe, A. C., Waldon, Z., Freeman, M. R., and Steen, H. (2008) Optimizing sample handling for urinary proteomics. J. Proteome Res. 7, 4022-4030
-
(2008)
J. Proteome Res.
, vol.7
, pp. 4022-4030
-
-
Lee, R.S.1
Monigatti, F.2
Briscoe, A.C.3
Waldon, Z.4
Freeman, M.R.5
Steen, H.6
-
19
-
-
34249681985
-
Diabetes-induced changes in the renal cortical proteome assessed with two-dimensional gel electrophoresis and mass spectrometry
-
DOI 10.1002/pmic.200700017
-
Tilton, R. G., Haidacher, S. J., Lejeune, W. S., Zhang, X., Zhao, Y., Kurosky, A., Brasier, A. R., and Denner, L. (2007) Diabetes-induced changes in the renal cortical proteome assessed with two-dimensional gel electrophoresis and mass spectrometry. Proteomics 7, 1729-1742 (Pubitemid 46841832)
-
(2007)
Proteomics
, vol.7
, Issue.10
, pp. 1729-1742
-
-
Tilton, R.G.1
Haidacher, S.J.2
LeJeune, W.S.3
Zhang, X.4
Zhao, Y.5
Kurosky, A.6
Brasier, A.R.7
Denner, L.8
-
20
-
-
33644874405
-
Increased urinary excretions of immunoglobulin G, ceruloplasmin, and transferrin predict development of microalbuminuria in patients with type 2 diabetes
-
Narita, T., Hosoba, M., Kakei, M., and Ito, S. (2006) Increased urinary excretions of immunoglobulin g, ceruloplasmin, and transferrin predict development of microalbuminuria in patients with type 2 diabetes. Diabetes Care 29, 142-144 (Pubitemid 44033448)
-
(2006)
Diabetes Care
, vol.29
, Issue.1
, pp. 142-144
-
-
Narita, T.1
Hosoba, M.2
Kakei, M.3
Ito, S.4
-
21
-
-
0036111181
-
Transferrinuria in type 2 diabetic patients with early nephropathy and tubulointerstitial injury
-
DOI 10.1016/S0953-6205(02)00028-6, PII S0953620502000286
-
Kanauchi, M., Akai, Y., and Hashimoto, T. (2002) Transferrinuria in type 2 diabetic patients with early nephropathy and tubulointerstitial injury. Eur. J. Intern. Med. 13, 190-193 (Pubitemid 34518510)
-
(2002)
European Journal of Internal Medicine
, vol.13
, Issue.3
, pp. 190-193
-
-
Kanauchi, M.1
Akai, Y.2
Hashimoto, T.3
-
22
-
-
33947270262
-
Urine biomarkers predict the cause of glomerular disease
-
Varghese, S. A., Powell, T. B., Budisavljevic, M. N., Oates, J. C., Raymond, J. R., Almeida, J. S., and Arthur, J. M. (2007) Urine biomarkers predict the cause of glomerular disease. J. Am. Soc. Nephrol. 18, 913-922
-
(2007)
J. Am. Soc. Nephrol.
, vol.18
, pp. 913-922
-
-
Varghese, S.A.1
Powell, T.B.2
Budisavljevic, M.N.3
Oates, J.C.4
Raymond, J.R.5
Almeida, J.S.6
Arthur, J.M.7
-
23
-
-
22044440445
-
Two-dimensional fluorescence difference gel electrophoresis analysis of the urine proteome in human diabetic nephropathy
-
DOI 10.1002/pmic.200401288
-
Sharma, K., Lee, S., Han, S., Lee, S., Francos, B., McCue, P., Wassell, R., Shaw, M. A., and RamachandraRao, S. P. (2005) Two-dimensional fluorescence difference gel electrophoresis analysis of the urine proteome in human diabetic nephropathy. Proteomics 5, 2648-2655 (Pubitemid 40966492)
-
(2005)
Proteomics
, vol.5
, Issue.10
, pp. 2648-2655
-
-
Sharma, K.1
Lee, S.2
Han, S.3
Lee, S.4
Francos, B.5
McCue, P.6
Wassell, R.7
Shaw, M.A.8
RamachandraRao, S.P.9
-
24
-
-
0024616595
-
Immunopathological analysis of acute phase reactant (APR) proteins in glomeruli from patients with diabetic nephropathy
-
Inoue, W. (1989) Immunopathological analysis of acute phase reactant (APR) proteins in glomeruli from patients with diabetic nephropathy. Nippon Jinzo Gakkai Shi 31, 211-219
-
(1989)
Nippon Jinzo Gakkai Shi
, vol.31
, pp. 211-219
-
-
Inoue, W.1
-
25
-
-
33847691204
-
Proteomic identification of urinary biomarkers of diabetic nephropathy
-
Rao, P. V., Lu, X., Standley, M., Pattee, P., Neelima, G., Girisesh, G., Dakshinamurthy, K. V., Roberts, C. T., Jr., and Nagalla, S. R. (2007) Proteomic identification of urinary biomarkers of diabetic nephropathy. Diabetes Care 30, 629-637
-
(2007)
Diabetes Care
, vol.30
, pp. 629-637
-
-
Rao, P.V.1
Lu, X.2
Standley, M.3
Pattee, P.4
Neelima, G.5
Girisesh, G.6
Dakshinamurthy, K.V.7
Roberts Jr., C.T.8
Nagalla, S.R.9
|