Elr-type proteins protect Xenopus Dead end mRNA from miR-18-mediated clearance in the soma

Proceedings of the National Academy of Sciences of the United States of America

Volumn 107, Issue 37, 2010, Pages 16148-16153

  Koebernick, Katja ^a   Loeber, Jana ^a,b   Arthur, Patrick Kobina ^a,c   Tarbashevich, Katsiaryna ^a,d   Pieler, Tomas ^a  

^a UNIVERSITY OF GÖTTINGEN   (Germany)

^b UNIVERSITY HOSPITAL HEIDELBERG   (Germany)

^c UNIVERSITY OF GHANA   (Ghana)

^d INST OF REPRO MED OF THE UNIV   (Germany)

Author keywords

Development; Germ cell; MicroRNA; RNA localization; Vegetal

Indexed keywords

CELL PROTEIN; ELR TYPE PROTEIN; MESSENGER RNA; MICRORNA; MICRORNA 18; PROTEIN ELRB1; PROTEIN NANOS1; RNA; UNCLASSIFIED DRUG; XENOPUS DEAD END PROTEIN; XENOPUS PROTEIN; ZEBRAFISH PROTEIN; DEAD END PROTEIN, XENOPUS; ELRA PROTEIN, XENOPUS; ELRB PROTEIN, XENOPUS; RIBONUCLEOPROTEIN; RNA BINDING PROTEIN;

ANIMAL CELL; ANIMAL EXPERIMENT; ARTICLE; CELL PROTECTION; COMPLEX FORMATION; CONTROLLED STUDY; EMBRYO; FEMALE; GERM CELL; GERM LINE; INJECTION; MEDIATOR; NONHUMAN; OOCYTE DEVELOPMENT; PRIORITY JOURNAL; PROTEIN LOCALIZATION; PROTEIN STABILITY; REPORTER GENE; RNA PROCESSING; RNA TRANSPORT; SOMATIC CELL; TRANSCRIPTION INITIATION; VEGETATION; XENOPUS; ZEBRA FISH; ANIMAL; ANIMAL EMBRYO; EMBRYOLOGY; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; METABOLISM; NUCLEOTIDE SEQUENCE; XENOPUS LAEVIS;

ANIMALIA; DANIO RERIO;

ANIMALS; BASE SEQUENCE; EMBRYO, NONMAMMALIAN; FEMALE; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, REPORTER; GERM CELLS; MICRORNAS; RIBONUCLEOPROTEINS; RNA, MESSENGER; RNA-BINDING PROTEINS; TRANSCRIPTION, GENETIC; XENOPUS LAEVIS; XENOPUS PROTEINS;

EID: 77957990878     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1004401107     Document Type: Article

References (33)

1. Kloc M, et al. (2001) RNA localization and germ cell determination in Xenopus. Int Rev Cytol 203:63-91.
2. Houston DW, King ML (2000) Germ plasm and molecular determinants of germ cell fate. Curr Top Dev Biol 50:155-181.
3. Kloc M, Etkin LD (1995) Two distinct pathways for the localization of RNAs at the vegetal cortex in Xenopus oocytes. Development 121:287-297.
4. King ML, Messitt TJ, Mowry KL (2005) Putting RNAs in the right place at the right time: RNA localization in the frog oocyte. Biol Cell 97:19-33.
5. Houston DW, Zhang J, Maines JZ, Wasserman SA, King ML (1998) A Xenopus DAZ-like gene encodes an RNA component of germ plasm and is a functional homologue of Drosophila boule. Development 125:171-180. (Pubitemid 28064431)
6. Hudson C, Woodland HR (1998) Xpat, a gene expressed specifically in germ plasm and primordial germ cells of Xenopus laevis. Mech Dev 73:159-168.
7. Machado RJ, et al. (2005) Xenopus Xpat protein is a major component of germ plasm and may function in its organisation and positioning. Dev Biol 287:289-300.
8. Horvay K, Claussen M, Katzer M, Landgrebe J, Pieler T (2006) Xenopus Dead end mRNA is a localized maternal determinant that serves a conserved function in germ cell development. Dev Biol 291:1-11.
9. Weidinger G, et al. (2003) dead end, a novel vertebrate germplasm component, is required for zebrafish primordial germ cellmigration and survival. Curr Biol 13:1429-1434.
10. Youngren KK, et al. (2005) The Ter mutation in the dead end gene causes germ cell loss and testicular germ cell tumours. Nature 435:360-364. (Pubitemid 40745546)
11. Giraldez AJ, et al. (2006) Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs. Science 312:75-79.
12. Mishima Y, et al. (2006) Differential regulation of germline mRNAs in soma and germ cells by zebrafish miR-430. Curr Biol 16:2135-2142.
13. Kedde M, et al. (2007) RNA-binding protein Dnd1 inhibits microRNA access to target mRNA. Cell 131:1273-1286.
14. Lund E, Liu M, Hartley RS, Sheets MD, Dahlberg JE (2009) Deadenylation of maternal mRNAs mediated by miR-427 in Xenopus laevis embryos. RNA 15:2351-2363.
15. Rosa A, Spagnoli FM, Brivanlou AH (2009) The miR-430/427/302 family controls mesendodermal fate specification via species-specific target selection. Dev Cell 16:517-527.
16. Bushati N, Stark A, Brennecke J, Cohen SM (2008) Temporal reciprocity of miRNAs and their targets during the maternal-to-zygotic transition in Drosophila. Curr Biol 18:501-506.
17. Rebagliati MR, Weeks DL, Harvey RP, Melton DA (1985) Identification and cloning of localized maternal RNAs from Xenopus eggs. Cell 42:769-777.
18. Zhang J, King ML (1996) Xenopus VegT RNA is localized to the vegetal cortex during oogenesis and encodes a novel T-box transcription factor involved in mesodermal patterning. Development 122:4119-4129. (Pubitemid 27033904)
19. Kloc M, Bilinski S, Pui-Yee Chan A, Etkin LD (2000) The targeting of Xcat2 mRNA to the germinal granules depends on a cis-acting germinal granule localization element within the 3′UTR. Dev Biol 217:221-229. (Pubitemid 30060871)
20. Betley JN, Frith MC, Graber JH, Choo S, Deshler JO (2002) A ubiquitous and conserved signal for RNA localization in chordates. Curr Biol 12:1756-1761.
21. Enright AJ, et al. (2003) MicroRNA targets in Drosophila. Genome Biol 5:R1.
22. Griffiths-Jones S (2006) miRBase: The microRNA sequence database. Methods Mol Biol 342:129-138.
23. Giraldez AJ, et al. (2005) MicroRNAs regulate brain morphogenesis in zebrafish. Science 308:833-838.
24. Arthur PK, et al. (2009) Participation of Xenopus Elr-type proteins in vegetal mRNA localization during oogenesis. J Biol Chem 284:19982-19992.
25. Yaman I, et al. (2002) Nutritional control of mRNA stability is mediated by a conserved AU-rich element that binds the cytoplasmic shuttling protein HuR. J Biol Chem 277:41539-41546.
26. Kullmann M, Gopfert U, Siewe B, Hengst L (2002) ELAV/Hu proteins inhibit p27 translation via an IRES element in the p27 5′UTR. Genes Dev 16:3087-3099. (Pubitemid 35424195)
27. Perron M, Furrer MP, Wegnez M, Theodore L (1999) Xenopus elav-like genes are differentially expressed during neurogenesis. Mech Dev 84:139-142. (Pubitemid 29331661)
28. Kataoka K, et al. (2006) Visualization of the Xenopus primordial germ cells using a green fluorescent protein controlled by cis elements of the 3′ untranslated region of the DEADSouth gene. Mech Dev 123:746-760.
29. Watanabe T, et al. (2005) Stage-specific expression of microRNAs during Xenopus development. FEBS Lett 579:318-324.
30. Devaux A, Colegrove-Otero LJ, Standart N (2006) Xenopus ElrB, but not ElrA, binds RNA as an oligomer: Possible role of the linker. FEBS Lett 580:4947-4952. (Pubitemid 44286858)
31. Takeda Y, Mishima Y, Fujiwara T, Sakamoto H, Inoue K (2009) DAZL relieves miRNA-mediated repression of germline mRNAs by controlling poly(A) tail length in zebrafish. PLoS ONE 4:e7513.
32. Bhattacharyya SN, Habermacher R, Martine U, Closs EI, Filipowicz W (2006) Relief of microRNA-mediated translational repression in human cells subjected to stress. Cell 125:1111-1124.
33. Hollemann T, Panitz F, Pieler T (1999) In situ hybridization techniques with Xenopus embryos. A Comparative Methods Approach to the Study of Oocytes and Embryos, ed Richter JD (Oxford Univ Press, New York), pp 279-290.