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Volumn 5, Issue 8, 2010, Pages

Hybrid models identified a 12-gene signature for lung cancer prognosis and chemoresponse prediction

Author keywords

[No Author keywords available]

Indexed keywords

CARBOPLATIN; CISPLATIN; ERLOTINIB; ETOPOSIDE; EXPORTIN 1; GEFITINIB; GENE PRODUCT; MESSENGER RNA; PACLITAXEL; PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE 1; PROTEIN ATP6V0D1; PROTEIN CCDC99; PROTEIN DLC1; PROTEIN FAM164A; PROTEIN LMF1; PROTEIN PKLR; PROTEIN SCLY; PROTEIN SMPD1; PROTEIN STK24; PROTEIN ZAK; UNCLASSIFIED DRUG; ANTINEOPLASTIC AGENT;

EID: 77957877214     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0012222     Document Type: Article
Times cited : (49)

References (37)
  • 1
    • 18044384874 scopus 로고    scopus 로고
    • American Cancer Society, AtlantaGa: American Cancer Society
    • American Cancer Society (2005) Cancer Facts and Figures 2005. AtlantaGa: American Cancer Society.
    • (2005) Cancer Facts and Figures 2005
  • 2
    • 0023726197 scopus 로고
    • Prognosis and survival in resected lung carcinoma based on the new international staging system
    • Naruke T, Goya T, Tsuchiya R, Suemasu K (1988) Prognosis and survival in resected lung carcinoma based on the new international staging system. J Thorac Cardiovasc Surg 96: 440-447.
    • (1988) J Thorac Cardiovasc Surg , vol.96 , pp. 440-447
    • Naruke, T.1    Goya, T.2    Tsuchiya, R.3    Suemasu, K.4
  • 4
    • 33744502855 scopus 로고    scopus 로고
    • Cancer biomarkers-an invitation to the table
    • Dalton WS, Friend SH (2006) Cancer biomarkers-an invitation to the table. Science 312: 1165-1168.
    • (2006) Science , vol.312 , pp. 1165-1168
    • Dalton, W.S.1    Friend, S.H.2
  • 5
    • 19944422061 scopus 로고    scopus 로고
    • A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer
    • Paik S, Shak S, Tang G, Kim C, Baker J, et al. (2004) A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer. N Engl J Med 351: 2817-2826.
    • (2004) N Engl J Med , vol.351 , pp. 2817-2826
    • Paik, S.1    Shak, S.2    Tang, G.3    Kim, C.4    Baker, J.5
  • 6
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • van't Veer LJ, Dai H, van de Vijver MJ, He YD, Hart AA, et al. (2002) Gene expression profiling predicts clinical outcome of breast cancer. Nature 415: 530-536.
    • (2002) Nature , vol.415 , pp. 530-536
    • van't Veer, L.J.1    Dai, H.2    van de Vijver, M.J.3    He, Y.D.4    Hart, A.A.5
  • 7
    • 0037137519 scopus 로고    scopus 로고
    • A geneexpression signature as a predictor of survival in breast cancer
    • van de Vijver MJ, He YD, van't Veer LJ, Dai H, Hart AA, et al. (2002) A geneexpression signature as a predictor of survival in breast cancer. N Engl J Med 347: 1999-2009.
    • (2002) N Engl J Med , vol.347 , pp. 1999-2009
    • van de Vijver, M.J.1    He, Y.D.2    van't Veer, L.J.3    Dai, H.4    Hart, A.A.5
  • 8
    • 7444253428 scopus 로고    scopus 로고
    • Systems biology and new technologies enable predictive and preventative medicine
    • Hood L, Heath JR, Phelps ME, Lin B (2004) Systems biology and new technologies enable predictive and preventative medicine. Science 306: 640-643.
    • (2004) Science , vol.306 , pp. 640-643
    • Hood, L.1    Heath, J.R.2    Phelps, M.E.3    Lin, B.4
  • 9
    • 34248352185 scopus 로고    scopus 로고
    • Markers for early detection of cancer: Statistical guidelines for nested case-control studies
    • Baker SG, Kramer BS, Srivastava S (2002) Markers for early detection of cancer: statistical guidelines for nested case-control studies. BMC Med Res Methodol 2: 4.
    • (2002) BMC Med Res Methodol , vol.2 , pp. 4
    • Baker, S.G.1    Kramer, B.S.2    Srivastava, S.3
  • 10
    • 0032583152 scopus 로고    scopus 로고
    • Analysis of repeated markers used to predict progression of cancer
    • Emir B, Wieand S, Su JQ, Cha S (1998) Analysis of repeated markers used to predict progression of cancer. Stat Med 17: 2563-2578.
    • (1998) Stat Med , vol.17 , pp. 2563-2578
    • Emir, B.1    Wieand, S.2    Su, J.Q.3    Cha, S.4
  • 11
    • 2342571696 scopus 로고    scopus 로고
    • Limitations of the odds ratio in gauging the performance of a diagnostic, prognostic, or screening marker
    • Pepe MS, Janes H, Longton G, Leisenring W, Newcomb P (2004) Limitations of the odds ratio in gauging the performance of a diagnostic, prognostic, or screening marker. Am J Epidemiol 159: 882-890.
    • (2004) Am J Epidemiol , vol.159 , pp. 882-890
    • Pepe, M.S.1    Janes, H.2    Longton, G.3    Leisenring, W.4    Newcomb, P.5
  • 12
    • 18544365698 scopus 로고    scopus 로고
    • Geneexpression profiles predict survival of patients with lung adenocarcinoma
    • Beer DG, Kardia SL, Huang CC, Giordano TJ, Levin AM, et al. (2002) Geneexpression profiles predict survival of patients with lung adenocarcinoma. Nat Med 8: 816-824.
    • (2002) Nat Med , vol.8 , pp. 816-824
    • Beer, D.G.1    Kardia, S.L.2    Huang, C.C.3    Giordano, T.J.4    Levin, A.M.5
  • 13
    • 0035923521 scopus 로고    scopus 로고
    • Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses
    • Bhattacharjee A, Richards WG, Staunton J, Li C, Monti S, et al. (2001) Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses. Proc Natl Acad Sci U S A 98: 13790-13795.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 13790-13795
    • Bhattacharjee, A.1    Richards, W.G.2    Staunton, J.3    Li, C.4    Monti, S.5
  • 14
    • 31144459985 scopus 로고    scopus 로고
    • Oncogenic pathway signatures in human cancers as a guide to targeted therapies
    • Bild AH, Yao G, Chang JT, Wang Q, Potti A, et al. (2006) Oncogenic pathway signatures in human cancers as a guide to targeted therapies. Nature 439: 353-357.
    • (2006) Nature , vol.439 , pp. 353-357
    • Bild, A.H.1    Yao, G.2    Chang, J.T.3    Wang, Q.4    Potti, A.5
  • 15
    • 24944557944 scopus 로고    scopus 로고
    • Lung adenocarcinoma global profiling identifies type II transforming growth factorbeta receptor as a repressor of invasiveness
    • Borczuk AC, Kim HK, Yegen HA, Friedman RA, Powell CA (2005) Lung adenocarcinoma global profiling identifies type II transforming growth factorbeta receptor as a repressor of invasiveness. Am J Respir Crit Care Med 172: 729-737.
    • (2005) Am J Respir Crit Care Med , vol.172 , pp. 729-737
    • Borczuk, A.C.1    Kim, H.K.2    Yegen, H.A.3    Friedman, R.A.4    Powell, C.A.5
  • 16
    • 33846011470 scopus 로고    scopus 로고
    • A five-gene signature and clinical outcome in non-small-cell lung cancer
    • Chen HY, Yu SL, Chen CH, Chang GC, Chen CY, et al. (2007) A five-gene signature and clinical outcome in non-small-cell lung cancer. N Engl J Med 356: 11-20.
    • (2007) N Engl J Med , vol.356 , pp. 11-20
    • Chen, H.Y.1    Yu, S.L.2    Chen, C.H.3    Chang, G.C.4    Chen, C.Y.5
  • 17
    • 33746875641 scopus 로고    scopus 로고
    • A genomic strategy to refine prognosis in early-stage non-small-cell lung cancer
    • Potti A, Mukherjee S, Petersen R, Dressman HK, Bild A, et al. (2006) A genomic strategy to refine prognosis in early-stage non-small-cell lung cancer. N Engl J Med 355: 570-580.
    • (2006) N Engl J Med , vol.355 , pp. 570-580
    • Potti, A.1    Mukherjee, S.2    Petersen, R.3    Dressman, H.K.4    Bild, A.5
  • 18
    • 33747878451 scopus 로고    scopus 로고
    • Gene expression signatures for predicting prognosis of squamous cell and adenocarcinomas of the lung
    • Raponi M, Zhang Y, Yu J, Chen G, Lee G, et al. (2006) Gene expression signatures for predicting prognosis of squamous cell and adenocarcinomas of the lung. Cancer Res 66: 7466-7472.
    • (2006) Cancer Res , vol.66 , pp. 7466-7472
    • Raponi, M.1    Zhang, Y.2    Yu, J.3    Chen, G.4    Lee, G.5
  • 19
    • 49149129916 scopus 로고    scopus 로고
    • Gene expression-based survival prediction in lung adenocarcinoma: A multi-site, blinded validation study
    • Shedden K, Taylor JM, Enkemann SA, Tsao MS, Yeatman TJ, et al. (2008) Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study. Nat Med 14: 822-827.
    • (2008) Nat Med , vol.14 , pp. 822-827
    • Shedden, K.1    Taylor, J.M.2    Enkemann, S.A.3    Tsao, M.S.4    Yeatman, T.J.5
  • 20
    • 77950571895 scopus 로고    scopus 로고
    • Gene expression-based prognostic signatures in lung cancer: Ready for clinical use?
    • Subramanian J, Simon R (2010) Gene expression-based prognostic signatures in lung cancer: ready for clinical use? J Natl Cancer Inst 102: 464-474.
    • (2010) J Natl Cancer Inst , vol.102 , pp. 464-474
    • Subramanian, J.1    Simon, R.2
  • 21
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher VG, Tibshirani R, Chu G (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci U S A 98: 5116-5121.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 22
    • 33845877973 scopus 로고    scopus 로고
    • A gene expression signature predicts survival of patients with stage I non-small cell lung cancer
    • Lu Y, Lemon W, Liu PY, Yi Y, Morrison C, et al. (2006) A gene expression signature predicts survival of patients with stage I non-small cell lung cancer. PLoS Med 3: e467.
    • (2006) PLoS Med , vol.3
    • Lu, Y.1    Lemon, W.2    Liu, P.Y.3    Yi, Y.4    Morrison, C.5
  • 24
    • 33745214396 scopus 로고    scopus 로고
    • Constructing molecular classifiers for the accurate prognosis of lung adenocarcinoma
    • Guo L, Ma Y, Ward R, Castranova V, Shi X, et al. (2006) Constructing molecular classifiers for the accurate prognosis of lung adenocarcinoma. Clin Cancer Res 12: 3344-3354.
    • (2006) Clin Cancer Res , vol.12 , pp. 3344-3354
    • Guo, L.1    Ma, Y.2    Ward, R.3    Castranova, V.4    Shi, X.5
  • 25
    • 37649004550 scopus 로고    scopus 로고
    • Threegene prognostic classifier for early-stage non small-cell lung cancer
    • Lau SK, Boutros PC, Pintilie M, Blackhall FH, Zhu CQ, et al. (2007) Threegene prognostic classifier for early-stage non small-cell lung cancer. J Clin Oncol 25: 5562-5569.
    • (2007) J Clin Oncol , vol.25 , pp. 5562-5569
    • Lau, S.K.1    Boutros, P.C.2    Pintilie, M.3    Blackhall, F.H.4    Zhu, C.Q.5
  • 26
    • 33845200848 scopus 로고    scopus 로고
    • Mutation analysis of 24 known cancer genes in the NCI-60 cell line set
    • Ikediobi ON, Davies H, Bignell G, Edkins S, Stevens C, et al. (2006) Mutation analysis of 24 known cancer genes in the NCI-60 cell line set. Mol Cancer Ther 5: 2606-2612.
    • (2006) Mol Cancer Ther , vol.5 , pp. 2606-2612
    • Ikediobi, O.N.1    Davies, H.2    Bignell, G.3    Edkins, S.4    Stevens, C.5
  • 27
    • 58149356243 scopus 로고    scopus 로고
    • Confirmation of gene expression-based prediction of survival in non-small cell lung cancer
    • Guo NL, Wan Y, Tosun K, Lin H, Flynn DC, et al. (2008) Confirmation of gene expression-based prediction of survival in non-small cell lung cancer. Clin Cancer Res 14: 8213-8220.
    • (2008) Clin Cancer Res , vol.14 , pp. 8213-8220
    • Guo, N.L.1    Wan, Y.2    Tosun, K.3    Lin, H.4    Flynn, D.C.5
  • 28
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25: 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 29
  • 34
    • 34147115178 scopus 로고    scopus 로고
    • Transcript and protein expression profiles of the NCI-60 cancer cell panel: An integromic microarray study
    • Shankavaram UT, Reinhold WC, Nishizuka S, Major S, Morita D, et al. (2007) Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study. Mol Cancer Ther 6: 820-832.
    • (2007) Mol Cancer Ther , vol.6 , pp. 820-832
    • Shankavaram, U.T.1    Reinhold, W.C.2    Nishizuka, S.3    Major, S.4    Morita, D.5
  • 36
    • 60749101615 scopus 로고    scopus 로고
    • An integrative genomic and proteomic approach to chemosensitivity prediction
    • Ma Y, Ding Z, Qian Y, Wan Y, Tosun K, et al. (2009) An Integrative Genomic and Proteomic Approach to Chemosensitivity Prediction. Int J Oncol. pp 107-115.
    • (2009) Int J Oncol , pp. 107-115
    • Ma, Y.1    Ding, Z.2    Qian, Y.3    Wan, Y.4    Tosun, K.5
  • 37
    • 33748060533 scopus 로고    scopus 로고
    • Predicting cancer drug response by proteomic profiling
    • Ma Y, Ding Z, Qian Y, Shi X, Castranova V, et al. (2006) Predicting cancer drug response by proteomic profiling. Clin Cancer Res 12: 4583-4589.
    • (2006) Clin Cancer Res , vol.12 , pp. 4583-4589
    • Ma, Y.1    Ding, Z.2    Qian, Y.3    Shi, X.4    Castranova, V.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.