-
1
-
-
0026048709
-
Characterization of the IS895 family of insertion sequences from the cyanobacterium Anabaena sp. strain PCC 7120
-
Alam, J., J. M. Vrba, Y. Cai, J. A. Martin, L. J. Weislo, and S. E. Curtis. 1991. Characterization of the IS895 family of insertion sequences from the cyanobacterium Anabaena sp. strain PCC 7120. J. Bacteriol. 173:5778-5783.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5778-5783
-
-
Alam, J.1
Vrba, J.M.2
Cai, Y.3
Martin, J.A.4
Weislo, L.J.5
Curtis, S.E.6
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0026764851
-
Transposition of Tn5096 and related transposons in Streptomyces species
-
Baltz, R. H., D. R. Hahn, M. A. McHenney, and P. J. Solenberg. 1992. Transposition of Tn5096 and related transposons in Streptomyces species. Gene 115:61-65.
-
(1992)
Gene
, vol.115
, pp. 61-65
-
-
Baltz, R.H.1
Hahn, D.R.2
McHenney, M.A.3
Solenberg, P.J.4
-
4
-
-
0024758945
-
Characterization of an insertion sequence (IS891) of novel structure from the cyanobacterium Anabaena sp. strain M-131
-
Bancroft, I., and C. P. Wolk. 1989. Characterization of an insertion sequence (IS891) of novel structure from the cyanobacterium Anabaena sp. strain M-131. J. Bacteriol. 171:5949-5954.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 5949-5954
-
-
Bancroft, I.1
Wolk, C.P.2
-
5
-
-
0024764032
-
Physical and genetic maps of the genome of the heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120
-
Bancroft, I., C. P. Wolk, and E. V. Oren. 1989. Physical and genetic maps of the genome of the heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120. J. Bacteriol. 171:5940-5948.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 5940-5948
-
-
Bancroft, I.1
Wolk, C.P.2
Oren, E.V.3
-
6
-
-
21244481366
-
Inactivation of patS and hetN causes lethal levels of heterocyst differentiation in the filamentous cyanobacterium Anabaena sp. PCC 7120
-
Borthakur, P. B., C. C. Orozco, S. S. Young-Robbins, R. Haselkorn, and S. M. Callahan. 2005. Inactivation of patS and hetN causes lethal levels of heterocyst differentiation in the filamentous cyanobacterium Anabaena sp. PCC 7120. Mol. Microbiol. 57:111-123.
-
(2005)
Mol. Microbiol.
, vol.57
, pp. 111-123
-
-
Borthakur, P.B.1
Orozco, C.C.2
Young-Robbins, S.S.3
Haselkorn, R.4
Callahan, S.M.5
-
7
-
-
0026001126
-
Characterization of insertion sequence IS892 and related elements from the cyanobacterium Anabaena sp. strain PCC 7120
-
Cai, Y. 1991. Characterization of insertion sequence IS892 and related elements from the cyanobacterium Anabaena sp. strain PCC 7120. J. Bacteriol. 173:5771-5777.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5771-5777
-
-
Cai, Y.1
-
9
-
-
0025311083
-
Use of a conditionally lethal gene in Anabaena sp. strain PCC 7120 to select for double recombinants and to entrap insertion sequences
-
Cai, Y., and C. P. Wolk. 1990. Use of a conditionally lethal gene in Anabaena sp. strain PCC 7120 to select for double recombinants and to entrap insertion sequences. J. Bacteriol. 172:3138-3145.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 3138-3145
-
-
Cai, Y.1
Wolk, C.P.2
-
10
-
-
85158048416
-
Insertion sequences revisited
-
N. L. Craig, R. Craigie, M. Gellert, and A. M. Lambowitz (ed.), ASM Press, Washington, DC
-
Chandler, M., and J. Mahillon. 2002. Insertion sequences revisited, p. 305-366. In N. L. Craig, R. Craigie, M. Gellert, and A. M. Lambowitz (ed.), Mobile DNA II. ASM Press, Washington, DC.
-
(2002)
Mobile DNA II
, pp. 305-366
-
-
Chandler, M.1
Mahillon, J.2
-
11
-
-
62549105255
-
MUST: A system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi
-
Chen, Y., F. Zhou, G. Li, and Y. Xu. 2009. MUST: a system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi. Gene 436:1-7.
-
(2009)
Gene
, vol.436
, pp. 1-7
-
-
Chen, Y.1
Zhou, F.2
Li, G.3
Xu, Y.4
-
12
-
-
50649084154
-
Very small mobile repeated elements in cyanobacterial genomes
-
Elhai, J., M. Kato, S. Cousins, P. Lindblad, and J. L. Costa. 2008. Very small mobile repeated elements in cyanobacterial genomes. Genome Res. 18: 1484-1499.
-
(2008)
Genome Res.
, vol.18
, pp. 1484-1499
-
-
Elhai, J.1
Kato, M.2
Cousins, S.3
Lindblad, P.4
Costa, J.L.5
-
13
-
-
0030941679
-
Reduction of conjugal transfer efficiency by three restriction activities of Anabaena sp. strain PCC 7120
-
Elhai, J., A. Vepritskiy, A. M. Muro-Pastor, E. Flores, and C. P. Wolk. 1997. Reduction of conjugal transfer efficiency by three restriction activities of Anabaena sp. strain PCC 7120. J. Bacteriol. 179:1998-2005.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1998-2005
-
-
Elhai, J.1
Vepritskiy, A.2
Muro-Pastor, A.M.3
Flores, E.4
Wolk, C.P.5
-
14
-
-
0002734187
-
Bacterial insertion sequences
-
D. E. Berg and M. M. Howe (ed.), American Society for Microbiology, Washington, DC
-
Galas, D. J., and M. Chandler. 1989. Bacterial insertion sequences, p. 109-162. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, DC.
-
(1989)
Mobile DNA
, pp. 109-162
-
-
Galas, D.J.1
Chandler, M.2
-
15
-
-
0035980822
-
Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120
-
Kaneko, T., Y. Nakamura, C. P. Wolk, T. Kuritz, S. Sasamoto, A. Watanabe, M. Iriguchi, A. Ishikawa, K. Kawashima, T. Kimura, Y. Kishida, M. Kohara, M. Matsumoto, A. Matsuno, A. Muraki, N. Nakazaki, S. Shimpo, M. Sugimoto, M. Takazawa, M. Yamada, M. Yasuda, and S. Tabata. 2001. Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. DNA Res. 8:205-213.
-
(2001)
DNA Res.
, vol.8
, pp. 205-213
-
-
Kaneko, T.1
Nakamura, Y.2
Wolk, C.P.3
Kuritz, T.4
Sasamoto, S.5
Watanabe, A.6
Iriguchi, M.7
Ishikawa, A.8
Kawashima, K.9
Kimura, T.10
Kishida, Y.11
Kohara, M.12
Matsumoto, M.13
Matsuno, A.14
Muraki, A.15
Nakazaki, N.16
Shimpo, S.17
Sugimoto, M.18
Takazawa, M.19
Yamada, M.20
Yasuda, M.21
Tabata, S.22
more..
-
16
-
-
33745271325
-
Regulated expression of glutamyl-tRNA synthetase is directed by a mobile genetic element in the cyanobacterium Tolypothrix sp. PCC 7601
-
Luque, I., A. Andújar, L. Jia, G. Zabulon, N. Tandeau de Marsac, E. Flores, and J. Houmard. 2006. Regulated expression of glutamyl-tRNA synthetase is directed by a mobile genetic element in the cyanobacterium Tolypothrix sp. PCC 7601. Mol. Microbiol. 60:1276-1288.
-
(2006)
Mol. Microbiol.
, vol.60
, pp. 1276-1288
-
-
Luque, I.1
Andújar, A.2
Jia, L.3
Zabulon, G.4
Tandeau De Marsac, N.5
Flores, E.6
Houmard, J.7
-
18
-
-
58149203237
-
CDD: Specific functional annotation with the Conserved Domain Database
-
Marchler-Bauer, A., J. B. Anderson, F. Chitsaz, M. K. Derbyshire, C. DeWeese-Scott, J. H. Fong, L. Y. Geer, R. C. Geer, N. R. Gonzales, M. Gwadz, S. He, D. I. Hurwitz, J. D. Jackson, Z. Ke, C. J. Lanczycki, C. A. Liebert, C. Liu, F. Lu, S. Lu, G. H. Marchler, M. Mullokandov, J. S. Song, A. Tasneem, N. Thanki, R. A. Yamashita, D. Zhang, N. Zhang, and S. H. Bryant. 2009. CDD: specific functional annotation with the Conserved Domain Database. Nucleic Acids Res. 37:D205-D210.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Chitsaz, F.3
Derbyshire, M.K.4
DeWeese-Scott, C.5
Fong, J.H.6
Geer, L.Y.7
Geer, R.C.8
Gonzales, N.R.9
Gwadz, M.10
He, S.11
Hurwitz, D.I.12
Jackson, J.D.13
Ke, Z.14
Lanczycki, C.J.15
Liebert, C.A.16
Liu, C.17
Lu, F.18
Lu, S.19
Marchler, G.H.20
Mullokandov, M.21
Song, J.S.22
Tasneem, A.23
Thanki, N.24
Yamashita, R.A.25
Zhang, D.26
Zhang, N.27
Bryant, S.H.28
more..
-
19
-
-
0035312284
-
DNA methyltransferases of the cyanobacterium Anabaena PCC 7120
-
Matveyev, A. V., K. T. Young, A. Meng, and J. Elhai. 2001. DNA methyltransferases of the cyanobacterium Anabaena PCC 7120. Nucleic Acids Res. 29:1491-1506.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1491-1506
-
-
Matveyev, A.V.1
Young, K.T.2
Meng, A.3
Elhai, J.4
-
20
-
-
1842558984
-
The gas vesicle gene cluster from Microcystis aeruginosa and DNA rearrangements that lead to loss of cell buoyancy
-
Mlouka, A., K. Comte, A. M. Castets, C. Bouchier, and N. Tandeau de Marsac. 2004. The gas vesicle gene cluster from Microcystis aeruginosa and DNA rearrangements that lead to loss of cell buoyancy. J. Bacteriol. 186: 2355-2365.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2355-2365
-
-
Mlouka, A.1
Comte, K.2
Castets, A.M.3
Bouchier, C.4
Tandeau De Marsac, N.5
-
21
-
-
0028120676
-
Transfer of a genetic marker from a megaplasmid of Anabaena sp. strain PCC 7120 to a megaplasmid of a different Anabaena strain
-
Muro-Pastor, A. M., T. Kuritz, E. Flores, A. Herrero, and C. P. Wolk. 1994. Transfer of a genetic marker from a megaplasmid of Anabaena sp. strain PCC 7120 to a megaplasmid of a different Anabaena strain. J. Bacteriol. 176:1093-1098.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1093-1098
-
-
Muro-Pastor, A.M.1
Kuritz, T.2
Flores, E.3
Herrero, A.4
Wolk, C.P.5
-
22
-
-
76749135815
-
Identification and characterization of repetitive extragenic palindromes (REP)-associated tyrosine transposases: Implications for REP evolution and dynamics in bacterial genomes
-
Nunvar, J., T. Huckova, and I. Licha. 2010. Identification and characterization of repetitive extragenic palindromes (REP)-associated tyrosine transposases: implications for REP evolution and dynamics in bacterial genomes. BMC Genomics 11:44.
-
(2010)
BMC Genomics
, vol.11
, pp. 44
-
-
Nunvar, J.1
Huckova, T.2
Licha, I.3
-
23
-
-
0035981243
-
Characterization of genes encoding multi-domain proteins in the genome of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120
-
Ohmori, M., M. Ikeuchi, N. Sato, P. Wolk, T. Kaneko, T. Ogawa, M. Kanehisa, S. Goto, S. Kawashima, S. Okamoto, H. Yoshimura, H. Katoh, T. Fujisawa, S. Ehira, A. Kamei, S. Yoshihara, R. Narikawa, and S. Tabata. 2001. Characterization of genes encoding multi-domain proteins in the genome of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. DNA Res. 8:271-284.
-
(2001)
DNA Res.
, vol.8
, pp. 271-284
-
-
Ohmori, M.1
Ikeuchi, M.2
Sato, N.3
Wolk, P.4
Kaneko, T.5
Ogawa, T.6
Kanehisa, M.7
Goto, S.8
Kawashima, S.9
Okamoto, S.10
Yoshimura, H.11
Katoh, H.12
Fujisawa, T.13
Ehira, S.14
Kamei, A.15
Yoshihara, S.16
Narikawa, R.17
Tabata, S.18
-
24
-
-
67649828011
-
Diversity of 23S rRNA genes within individual prokaryotic genomes
-
Pei, A., C. W. Nossa, P. Chokshi, M. J. Blaser, L. Yang, D. M. Rosmarin, and Z. Pei. 2009. Diversity of 23S rRNA genes within individual prokaryotic genomes. PLoS One 4:e5437.
-
(2009)
PLoS One
, vol.4
-
-
Pei, A.1
Nossa, C.W.2
Chokshi, P.3
Blaser, M.J.4
Yang, L.5
Rosmarin, D.M.6
Pei, Z.7
-
25
-
-
0000197255
-
Subsection IV
-
D. R. Boone, R. W. Castenholz, and G. M. Garrity (ed.), 2nd ed., The Archaea and the deeply branching and phototrophic Bacteria. Springer-Verlag, New York, NY
-
Rippka, R., R. W. Castenholz, and M. Herdman. 2001. Subsection IV, p. 562-580. In D. R. Boone, R. W. Castenholz, and G. M. Garrity (ed.), Bergey's manual of systematic bacteriology, 2nd ed., vol. 1. The Archaea and the deeply branching and phototrophic Bacteria. Springer-Verlag, New York, NY.
-
(2001)
Bergey's Manual of Systematic Bacteriology
, vol.1
, pp. 562-580
-
-
Rippka, R.1
Castenholz, R.W.2
Herdman, M.3
-
26
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
27
-
-
0000507749
-
Matrices for detecting distant relationships
-
M. Dayhoff (ed.), National Biomedical Research Foundation, New York, NY
-
Schwarz, R., and M. Dayhoff. 1979. Matrices for detecting distant relationships, p. 353-358. In M. Dayhoff (ed.), Atlas of protein sequences. National Biomedical Research Foundation, New York, NY.
-
(1979)
Atlas of Protein Sequences
, pp. 353-358
-
-
Schwarz, R.1
Dayhoff, M.2
-
28
-
-
33644873699
-
ISfinder: The reference centre for bacterial insertion sequences
-
Siguier, P., J. Perochon, L. Lestrade, J. Mahillon, and M. Chandler. 2006. ISfinder: the reference centre for bacterial insertion sequences. Nucleic Acids Res. 34:D32-D36.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Siguier, P.1
Perochon, J.2
Lestrade, L.3
Mahillon, J.4
Chandler, M.5
-
30
-
-
34547781750
-
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
31
-
-
0027415132
-
Amplified expression of a transcriptional pattern formed during development of Anabaena
-
DOI 10.1111/j.1365-2958.1993.tb01135.x
-
Wolk, C. P., J. Elhai, T. Kuritz, and D. Holland. 1993. Amplified expression of a transcriptional pattern formed during development of Anabaena. Mol. Microbiol. 7:441-445. (Pubitemid 23051208)
-
(1993)
Molecular Microbiology
, vol.7
, Issue.3
, pp. 441-445
-
-
Wolk, C.P.1
Elhai, J.2
Kuritz, T.3
Holland, D.4
-
32
-
-
41049093450
-
Insertion sequences show diverse recent activities in cyanobacteria and archaea
-
Zhou, F., V. Olman, and Y. Xu. 2008. Insertion sequences show diverse recent activities in cyanobacteria and archaea. BMC Genomics 9:36.
-
(2008)
BMC Genomics
, vol.9
, pp. 36
-
-
Zhou, F.1
Olman, V.2
Xu, Y.3
-
33
-
-
36849025572
-
Nezha, a novel active miniature inverted-repeat transposable element in cyanobacteria
-
Zhou, F., T. Tran, and Y. Xu. 2008. Nezha, a novel active miniature inverted-repeat transposable element in cyanobacteria. Biochem. Biophys. Res. Commun. 365:790-794.
-
(2008)
Biochem. Biophys. Res. Commun.
, vol.365
, pp. 790-794
-
-
Zhou, F.1
Tran, T.2
Xu, Y.3
-
34
-
-
0036226288
-
Identification of an akinete marker gene in Anabaena variabilis
-
Zhou, R., and C. P. Wolk. 2002. Identification of an akinete marker gene in Anabaena variabilis. J. Bacteriol. 184:2529-2532.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2529-2532
-
-
Zhou, R.1
Wolk, C.P.2
|