-
1
-
-
0034704217
-
The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit
-
Brodersen, D.E. et al. The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. Cell 103, 1143-1154 (2000).
-
(2000)
Cell
, vol.103
, pp. 1143-1154
-
-
Brodersen, D.E.1
-
2
-
-
0034699519
-
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics
-
Carter, A.P. et al. Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics. Nature 407, 340-348 (2000).
-
(2000)
Nature
, vol.407
, pp. 340-348
-
-
Carter, A.P.1
-
3
-
-
0036342198
-
The structures of four macrolide antibiotics bound to the large ribosomal subunit
-
Hansen, J.L. et al. The structures of four macrolide antibiotics bound to the large ribosomal subunit. Mol. Cell 10, 117-128 (2002).
-
(2002)
Mol. Cell
, vol.10
, pp. 117-128
-
-
Hansen, J.L.1
-
4
-
-
0035986717
-
Antibiotics targeting ribosomes: Crystallographic studies
-
Auerbach, T. et al. Antibiotics targeting ribosomes: crystallographic studies. Curr. Drug Targets Infect. Disord. 2, 169-186 (2002).
-
(2002)
Curr. Drug Targets Infect. Disord.
, vol.2
, pp. 169-186
-
-
Auerbach, T.1
-
6
-
-
0036589253
-
Killing of E. coli cells by e group nuclease colicins
-
James, R., Penfold, C.N., Moore, G.R. & Kleanthous, C. Killing of E. coli cells by E group nuclease colicins. Biochimie 84, 381-389 (2002).
-
(2002)
Biochimie
, vol.84
, pp. 381-389
-
-
James, R.1
Penfold, C.N.2
Moore, G.R.3
Kleanthous, C.4
-
7
-
-
0031983893
-
Distinct regions of the colicin A translocation domain are involved in the interaction with TolA and TolB proteins upon import into Escherichia coli
-
Bouveret, E., Rigal, A., Lazdunski, C. & Benedetti, H. Distinct regions of the colicin A translocation domain are involved in the interaction with TolA and TolB proteins upon import into Escherichia coli. Mol. Microbiol. 27, 143-157 (1998).
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 143-157
-
-
Bouveret, E.1
Rigal, A.2
Lazdunski, C.3
Benedetti, H.4
-
8
-
-
0012852996
-
Highly purifed colicin E3 contains immunity protein
-
Jakes, K.S. & Zinder, N.D. Highly purifed colicin E3 contains immunity protein. Proc. Natl. Acad. Sci. USA 71, 3380-3384 (1974).
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 3380-3384
-
-
Jakes, K.S.1
Zinder, N.D.2
-
9
-
-
0035478958
-
Immunity proteins: Enzyme inhibitors that avoid the active site
-
Kleanthous, C. & Walker, D. Immunity proteins: enzyme inhibitors that avoid the active site. Trends Biochem. Sci. 26, 624-631 (2001).
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 624-631
-
-
Kleanthous, C.1
Walker, D.2
-
10
-
-
0345701261
-
Thermodynamic consequences of bipartite immunity protein binding to the ribosomal ribonuclease colicin E3
-
Walker, D., Moore, G.R., James, R. & Kleanthous, C. Thermodynamic consequences of bipartite immunity protein binding to the ribosomal ribonuclease colicin E3. Biochemistry 42, 4161-4171 (2003).
-
(2003)
Biochemistry
, vol.42
, pp. 4161-4171
-
-
Walker, D.1
Moore, G.R.2
James, R.3
Kleanthous, C.4
-
11
-
-
33845456098
-
Release of immunity protein requires functional endonuclease colicin import machinery
-
Duché, D., Frenkian, A., Prima, V. & Lloubes, R. Release of immunity protein requires functional endonuclease colicin import machinery. J. Bacteriol. 188, 8593-8600 (2006).
-
(2006)
J. Bacteriol.
, vol.188
, pp. 8593-8600
-
-
Duché, D.1
Frenkian, A.2
Prima, V.3
Lloubes, R.4
-
12
-
-
0015057280
-
Specifc inactivation of 16S ribosomal RNA induced by colicin E3 in vivo
-
Bowman, C.M., Dahlberg, J.E., Ikemura, T., Konisky, J. & Nomura, M. Specifc inactivation of 16S ribosomal RNA induced by colicin E3 in vivo. Proc. Natl. Acad. Sci. USA 68, 964-968 (1971).
-
(1971)
Proc. Natl. Acad. Sci. USA
, vol.68
, pp. 964-968
-
-
Bowman, C.M.1
Dahlberg, J.E.2
Ikemura, T.3
Konisky, J.4
Nomura, M.5
-
13
-
-
0015056478
-
Effect of colicin E3 upon the 30S ribosomal subunit of Escherichia coli
-
Senior, B.W. & Holland, I.B. Effect of colicin E3 upon the 30S ribosomal subunit of Escherichia coli. Proc. Natl. Acad. Sci. USA 68, 959-963 (1971).
-
(1971)
Proc. Natl. Acad. Sci. USA
, vol.68
, pp. 959-963
-
-
Senior, B.W.1
Holland, I.B.2
-
14
-
-
0035930345
-
Crystal structure of colicin E3: Implications for cell entry and ribosome inactivation
-
Soelaiman, S., Jakes, K., Wu, N., Li, C. & Shoham, M. Crystal structure of colicin E3: implications for cell entry and ribosome inactivation. Mol. Cell 8, 1053-1062 (2001).
-
(2001)
Mol. Cell
, vol.8
, pp. 1053-1062
-
-
Soelaiman, S.1
Jakes, K.2
Wu, N.3
Li, C.4
Shoham, M.5
-
15
-
-
0034665456
-
Inhibition of a ribosome-inactivating ribonuclease: The crystal structure of the cytotoxic domain of colicin E3 in complex with its immunity protein
-
Carr, S., Walker, D., James, R., Kleanthous, C. & Hemmings, A.M. Inhibition of a ribosome-inactivating ribonuclease: the crystal structure of the cytotoxic domain of colicin E3 in complex with its immunity protein. Structure 8, 949-960 (2000).
-
(2000)
Structure
, vol.8
, pp. 949-960
-
-
Carr, S.1
Walker, D.2
James, R.3
Kleanthous, C.4
Hemmings, A.M.5
-
16
-
-
0036589163
-
On the interaction of colicin E3 with the ribosome
-
Zarivach, R. et al. On the interaction of colicin E3 with the ribosome. Biochimie 84, 447-454 (2002).
-
(2002)
Biochimie
, vol.84
, pp. 447-454
-
-
Zarivach, R.1
-
17
-
-
2442713814
-
Identifcation of the catalytic motif of the microbial ribosome inactivating cytotoxin colicin E3
-
Walker, D., Lancaster, L., James, R. & Kleanthous, C. Identifcation of the catalytic motif of the microbial ribosome inactivating cytotoxin colicin E3. Protein Sci. 13, 1603-1611 (2004).
-
(2004)
Protein Sci.
, vol.13
, pp. 1603-1611
-
-
Walker, D.1
Lancaster, L.2
James, R.3
Kleanthous, C.4
-
18
-
-
47249132914
-
Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes
-
Lancaster, L.E., Savelsbergh, A., Kleanthous, C., Wintermeyer, W. & Rodnina, M.V. Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes. Mol. Microbiol. 69, 390-401 (2008).
-
(2008)
Mol. Microbiol.
, vol.69
, pp. 390-401
-
-
Lancaster, L.E.1
Savelsbergh, A.2
Kleanthous, C.3
Wintermeyer, W.4
Rodnina, M.V.5
-
19
-
-
33749354360
-
Structure of the 70S ribosome complexed with mRNA and tRNA
-
Selmer, M. et al. Structure of the 70S ribosome complexed with mRNA and tRNA. Science 313, 1935-1942 (2006).
-
(2006)
Science
, vol.313
, pp. 1935-1942
-
-
Selmer, M.1
-
20
-
-
66149157000
-
Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome
-
Voorhees, R.M., Weixlbaumer, A., Loakes, D., Kelley, A.C. & Ramakrishnan, V. Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome. Nat. Struct. Mol. Biol. 16, 528-533 (2009).
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 528-533
-
-
Voorhees, R.M.1
Weixlbaumer, A.2
Loakes, D.3
Kelley, A.C.4
Ramakrishnan, V.5
-
21
-
-
0015899007
-
Protection of E. coli ribosomes against colicin E3-induced inactivation by bound aminoacyl-tRNA
-
Kaufmann, Y. & Zamir, A. Protection of E. coli ribosomes against colicin E3-induced inactivation by bound aminoacyl-tRNA. FEBS Lett. 36, 277-280 (1973).
-
(1973)
FEBS Lett.
, vol.36
, pp. 277-280
-
-
Kaufmann, Y.1
Zamir, A.2
-
22
-
-
0034699518
-
Structure of the 30S ribosomal subunit
-
Wimberly, B.T. et al. Structure of the 30S ribosomal subunit. Nature 407, 327-339 (2000).
-
(2000)
Nature
, vol.407
, pp. 327-339
-
-
Wimberly, B.T.1
-
23
-
-
0035805229
-
Recognition of cognate transfer RNA by the 30S ribosomal subunit
-
Ogle, J.M. et al. Recognition of cognate transfer RNA by the 30S ribosomal subunit. Science 292, 897-902 (2001).
-
(2001)
Science
, vol.292
, pp. 897-902
-
-
Ogle, J.M.1
-
24
-
-
71149087505
-
The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE
-
Neubauer, C. et al. The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE. Cell 139, 1084-1095 (2009).
-
(2009)
Cell
, vol.139
, pp. 1084-1095
-
-
Neubauer, C.1
-
25
-
-
55849143658
-
Insights into translational termination from the structure of RF2 bound to the ribosome
-
Weixlbaumer, A. et al. Insights into translational termination from the structure of RF2 bound to the ribosome. Science 322, 953-956 (2008).
-
(2008)
Science
, vol.322
, pp. 953-956
-
-
Weixlbaumer, A.1
-
26
-
-
58149374559
-
Crystal structure of a translation termination complex formed with release factor RF2
-
Korostelev, A. et al. Crystal structure of a translation termination complex formed with release factor RF2. Proc. Natl. Acad. Sci. USA 105, 19684-19689 (2008).
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 19684-19689
-
-
Korostelev, A.1
-
27
-
-
35748984942
-
Mutational analysis of S12 protein and implications for the accuracy of decoding by the ribosome
-
Sharma, D., Cukras, A.R., Rogers, E.J., Southworth, D.R. & Green, R. Mutational analysis of S12 protein and implications for the accuracy of decoding by the ribosome. J. Mol. Biol. 374, 1065-1076 (2007).
-
(2007)
J. Mol. Biol.
, vol.374
, pp. 1065-1076
-
-
Sharma, D.1
Cukras, A.R.2
Rogers, E.J.3
Southworth, D.R.4
Green, R.5
-
28
-
-
0035958587
-
The path of messenger RNA through the ribosome
-
Yusupova, G.Z., Yusupov, M.M., Cate, J.H. & Noller, H.F. The path of messenger RNA through the ribosome. Cell 106, 233-241 (2001).
-
(2001)
Cell
, vol.106
, pp. 233-241
-
-
Yusupova, G.Z.1
Yusupov, M.M.2
Cate, J.H.3
Noller, H.F.4
-
29
-
-
11844292767
-
MRNA helicase activity of the ribosome
-
Takyar, S., Hickerson, R.P. & Noller, H.F. mRNA helicase activity of the ribosome. Cell 120, 49-58 (2005).
-
(2005)
Cell
, vol.120
, pp. 49-58
-
-
Takyar, S.1
Hickerson, R.P.2
Noller, H.F.3
-
30
-
-
0034760104
-
Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base fipping
-
Yang, X., Gerczei, T., Glover, L.T. & Correll, C.C. Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base fipping. Nat. Struct. Biol. 8, 968-973 (2001).
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 968-973
-
-
Yang, X.1
Gerczei, T.2
Glover, L.T.3
Correll, C.C.4
-
31
-
-
0035848837
-
Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis
-
Rupert, P.B. & Ferre-D'Amare, A.R. Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis. Nature 410, 780-786 (2001).
-
(2001)
Nature
, vol.410
, pp. 780-786
-
-
Rupert, P.B.1
Ferre-D'Amare, A.R.2
-
32
-
-
0015132507
-
Inactivation of ribosomes in vitro by colicin e 3
-
Boon, T. Inactivation of ribosomes in vitro by colicin E 3. Proc. Natl. Acad. Sci. USA 68, 2421-2425 (1971).
-
(1971)
Proc. Natl. Acad. Sci. USA
, vol.68
, pp. 2421-2425
-
-
Boon, T.1
-
33
-
-
0015188985
-
Specifc inactivation of ribosomes by colicin E3 in vitro and mechanism of immunity in colicinogenic cells
-
Bowman, C.M., Sidikaro, J. & Nomura, M. Specifc inactivation of ribosomes by colicin E3 in vitro and mechanism of immunity in colicinogenic cells. Nat. New Biol. 234, 133-137 (1971).
-
(1971)
Nat. New Biol.
, vol.234
, pp. 133-137
-
-
Bowman, C.M.1
Sidikaro, J.2
Nomura, M.3
-
34
-
-
0015307990
-
Inactivation of ribosomes in vitro by colicin e 3 and its mechanism of action
-
Boon, T. Inactivation of ribosomes in vitro by colicin E 3 and its mechanism of action. Proc. Natl. Acad. Sci. USA 69, 549-552 (1972).
-
(1972)
Proc. Natl. Acad. Sci. USA
, vol.69
, pp. 549-552
-
-
Boon, T.1
-
35
-
-
47249083179
-
Inactivation of ribosomes by colicin E3 in vitro: Requirement for 50 S ribosomal subunits
-
Bowman, C.M. Inactivation of ribosomes by colicin E3 in vitro: Requirement for 50 S ribosomal subunits. FEBS Lett. 22, 73-75 (1972).
-
(1972)
FEBS Lett.
, vol.22
, pp. 73-75
-
-
Bowman, C.M.1
-
36
-
-
0017691264
-
Colicin E3 induced cleavage of 16s rRNA of isolated 30S ribosomal subunits
-
Ohno-Iwashita, Y. & Imahori, K. Colicin E3 induced cleavage of 16s rRNA of isolated 30S ribosomal subunits. J. Biochem. 82, 919-922 (1977).
-
(1977)
J. Biochem.
, vol.82
, pp. 919-922
-
-
Ohno-Iwashita, Y.1
Imahori, K.2
-
37
-
-
0018450196
-
Translational fdelity and specifcity of ribosomes cleaved by cloacin DF13
-
Twilt, J.C., Overbeek, G.P. & van Duin, J. Translational fdelity and specifcity of ribosomes cleaved by cloacin DF13. Eur. J. Biochem. 94, 477-484 (1979).
-
(1979)
Eur. J. Biochem.
, vol.94
, pp. 477-484
-
-
Twilt, J.C.1
Overbeek, G.P.2
Van Duin, J.3
-
38
-
-
0018347864
-
Colicin E3 treatment renders ribosomes more resistant to streptomycin and reduces miscoding
-
Sander, G. Colicin E3 treatment renders ribosomes more resistant to streptomycin and reduces miscoding. FEBS Lett. 97, 217-220 (1979).
-
(1979)
FEBS Lett.
, vol.97
, pp. 217-220
-
-
Sander, G.1
-
39
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch, W. Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Crystallogr. 26, 795-800 (1993).
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
40
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr
-
Brünger, A.T. et al. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 54, 905-921 (1998).
-
(1998)
D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
-
41
-
-
0037184536
-
Selection of tRNA by the ribosome requires a transition from an open to a closed form
-
Ogle, J.M., Murphy, F.V., Tarry, M.J. & Ramakrishnan, V. Selection of tRNA by the ribosome requires a transition from an open to a closed form. Cell 111, 721-732 (2002).
-
(2002)
Cell
, vol.111
, pp. 721-732
-
-
Ogle, J.M.1
Murphy, F.V.2
Tarry, M.J.3
Ramakrishnan, V.4
-
42
-
-
18844413446
-
Structural insights into translational fdelity
-
Ogle, J.M. & Ramakrishnan, V. Structural insights into translational fdelity. Annu. Rev. Biochem. 74, 129-177 (2005).
-
(2005)
Annu. Rev. Biochem.
, vol.74
, pp. 129-177
-
-
Ogle, J.M.1
Ramakrishnan, V.2
|