Establishment of a standardized system to perform population structure analyses with limited sample size or with different sets of SNP genotypes

Journal of Human Genetics

Volumn 55, Issue 8, 2010, Pages 525-533

  Kumasaka, Natsuhiko ^a   Yamaguchi Kabata, Yumi ^a   Takahashi, Atsushi ^a   Kubo, Michiaki ^a   Nakamura, Yusuke ^b   Kamatani, Naoyuki ^a  

^a Institute of Physical and Chemical Research   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

Author keywords

genome wide SNP genotypes; linear discriminant analysis; population structure; prediction; probabilistic PCA

Indexed keywords

ARTICLE; FEMALE; GENE FREQUENCY; GENETIC ANALYSIS; GENETIC VARIABILITY; GENOTYPE; HUMAN; JAPANESE; MAJOR CLINICAL STUDY; MALE; PHENOTYPE; POPULATION GENETICS; POPULATION STRUCTURE; PRINCIPAL COMPONENT ANALYSIS; SAMPLE SIZE; SINGLE NUCLEOTIDE POLYMORPHISM; VALIDITY;

ALGORITHMS; GENETICS, POPULATION; GENOME, HUMAN; GENOME-WIDE ASSOCIATION STUDY; GENOTYPE; HUMANS; POLYMORPHISM, SINGLE NUCLEOTIDE; PRINCIPAL COMPONENT ANALYSIS; SAMPLE SIZE;

EID: 77957563048     PISSN: 14345161     EISSN: None     Source Type: Journal    
DOI: 10.1038/jhg.2010.63     Document Type: Article

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