메뉴 건너뛰기




Volumn 99, Issue 6, 2010, Pages 1783-1790

Water under the BAR

Author keywords

[No Author keywords available]

Indexed keywords


EID: 77957371847     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2010.06.074     Document Type: Article
Times cited : (25)

References (36)
  • 1
    • 28444476999 scopus 로고    scopus 로고
    • Membrane curvature and mechanisms of dynamic cell membrane remodeling
    • McMahon, H. T., and J. L. Gallop. 2005. Membrane curvature and mechanisms of dynamic cell membrane remodeling. Nature. 438:590-596.
    • (2005) Nature. , vol.438 , pp. 590-596
    • McMahon, H.T.1    Gallop, J.L.2
  • 2
    • 33644846421 scopus 로고    scopus 로고
    • How proteins produce cellular membrane curvature. Nat
    • Zimmerberg, J., and M. M. Kozlov. 2006. How proteins produce cellular membrane curvature. Nat. Rev. Mol. Cell Biol. 7:9-19.
    • (2006) Rev. Mol. Cell Biol. , vol.7 , pp. 9-19
    • Zimmerberg, J.1    Kozlov, M.M.2
  • 3
    • 0034573212 scopus 로고    scopus 로고
    • Accessory factors in clathrin-dependent synaptic vesicle endocytosis
    • Slepnev, V. I., and P. De Camilli. 2000. Accessory factors in clathrin-dependent synaptic vesicle endocytosis. Nat. Rev. Neurosci. 1: 161-172.
    • (2000) Nat. Rev. Neurosci. , vol.1 , pp. 161-172
    • Slepnev, V.I.1    De Camilli, P.2
  • 4
    • 1842483252 scopus 로고    scopus 로고
    • Membrane curvature: How bar domains bend bilayers
    • Zimmerberg, J., and S. McLaughlin. 2004. Membrane curvature: how BAR domains bend bilayers. Curr. Biol. 14:R250-R252.
    • (2004) Curr. Biol. , vol.14
    • Zimmerberg, J.1    McLaughlin, S.2
  • 5
    • 1442317538 scopus 로고    scopus 로고
    • Bar domains as sensors of membrane curvature: The amphiphysin bar structure
    • Peter, B. J., H. M. Kent, H. T. McMahon. 2004. BAR domains as sensors of membrane curvature: the amphiphysin BAR structure. Science. 303:495-499.
    • (2004) Science. , vol.303 , pp. 495-499
    • Peter, B.J.1    Kent, H.M.2    McMahon, H.T.3
  • 6
    • 0035889088 scopus 로고    scopus 로고
    • Generation of high curvature membranes mediated by direct endophilin bilayer interactions
    • Farsad, K., N. Ringstad, P. De Camilli. 2001. Generation of high curvature membranes mediated by direct endophilin bilayer interactions. J. Cell Biol. 155:193-200.
    • (2001) J. Cell Biol. , vol.155 , pp. 193-200
    • Farsad, K.1    Ringstad, N.2    De Camilli, P.3
  • 7
    • 34249933061 scopus 로고    scopus 로고
    • How synaptotagmin promotes membrane fusion
    • Martens, S., M. M. Kozlov, and H. T. McMahon. 2007. How synaptotagmin promotes membrane fusion. Science. 316:1205-1208.
    • (2007) Science. , vol.316 , pp. 1205-1208
    • Martens, S.1    Kozlov, M.M.2    McMahon, H.T.3
  • 8
    • 0037179662 scopus 로고    scopus 로고
    • Curvature of clathrin-coated pits driven by epsin
    • Ford, M. G. J., I. G. Mills, H. T. McMahon. 2002. Curvature of clathrin-coated pits driven by epsin. Nature. 419:361-366.
    • (2002) Nature. , vol.419 , pp. 361-366
    • Ford, M.G.J.1    Mills, I.G.2    McMahon, H.T.3
  • 9
    • 43149102504 scopus 로고    scopus 로고
    • Role of helix 0 of the n-bar domain in membrane curvature generation
    • Fernandes, F., L. M. S. Loura, M. Prieto. 2008. Role of helix 0 of the N-BAR domain in membrane curvature generation. Biophys. J. 94:3065-3073.
    • (2008) Biophys. J. , vol.94 , pp. 3065-3073
    • Fernandes, F.1    Loura, L.M.S.2    Prieto, M.3
  • 10
    • 46449135255 scopus 로고    scopus 로고
    • The hydrophobic insertion mechanism of membrane curvature generation by proteins
    • Campelo, F., H. T. McMahon, and M. M. Kozlov. 2008. The hydrophobic insertion mechanism of membrane curvature generation by proteins. Biophys. J. 95:2325-2339.
    • (2008) Biophys. J. , vol.95 , pp. 2325-2339
    • Campelo, F.1    McMahon, H.T.2    Kozlov, M.M.3
  • 11
    • 70350233625 scopus 로고    scopus 로고
    • Hierarchical coarse- graining strategy for protein-membrane systems to access mesoscopic scales
    • discussion 445-481.
    • Ayton, G. S., E. Lyman, and G. A. Voth. 2010. Hierarchical coarse- graining strategy for protein-membrane systems to access mesoscopic scales. Faraday Discuss. 144:347-357, discussion 445-481.
    • (2010) Faraday Discuss. , vol.144 , pp. 347-357
    • Ayton, G.S.1    Lyman, E.2    Voth, G.A.3
  • 12
    • 70350014969 scopus 로고    scopus 로고
    • New insights into BAR domain-induced membrane remodeling
    • Ayton, G. S., E. Lyman, G. A. Voth. 2009. New insights into BAR domain-induced membrane remodeling. Biophys. J. 97:1616-1625.
    • (2009) Biophys. J. , vol.97 , pp. 1616-1625
    • Ayton, G.S.1    Lyman, E.2    Voth, G.A.3
  • 13
    • 50349086997 scopus 로고    scopus 로고
    • Factors influencing local membrane curvature induction by N-BAR domains as revealed by molecular dynamics simulations
    • Blood, P. D., R. D. Swenson, and G. A. Voth. 2008. Factors influencing local membrane curvature induction by N-BAR domains as revealed by molecular dynamics simulations. Biophys. J. 95:1866-1876.
    • (2008) Biophys. J. , vol.95 , pp. 1866-1876
    • Blood, P.D.1    Swenson, R.D.2    Voth, G.A.3
  • 14
    • 34247895641 scopus 로고    scopus 로고
    • Membrane remodeling from n-bar domain interactions: Insights from multi-scale simulation
    • Ayton, G. S., P. D. Blood, and G. A. Voth. 2007. Membrane remodeling from N-BAR domain interactions: insights from multi-scale simulation. Biophys. J. 92:3595-3602.
    • (2007) Biophys. J. , vol.92 , pp. 3595-3602
    • Ayton, G.S.1    Blood, P.D.2    Voth, G.A.3
  • 15
    • 33750037303 scopus 로고    scopus 로고
    • Direct observation of bin/amphi-physin/rvs (BAR) domain-induced membrane curvature by means of molecular dynamics simulations
    • Blood, P. D., and G. A. Voth. 2006. Direct observation of Bin/amphi-physin/Rvs (BAR) domain-induced membrane curvature by means of molecular dynamics simulations. Proc. Natl. Acad. Sci. USA. 103:15068-15072.
    • (2006) Proc. Natl. Acad. Sci. USA. , vol.103 , pp. 15068-15072
    • Blood, P.D.1    Voth, G.A.2
  • 16
    • 53249125167 scopus 로고    scopus 로고
    • Four-scale description of membrane sculpting by bar domains
    • Arkhipov, A., Y. Yin, and K. Schulten. 2008. Four-scale description of membrane sculpting by BAR domains. Biophys. J. 95:2806-2821.
    • (2008) Biophys. J. , vol.95 , pp. 2806-2821
    • Arkhipov, A.1    Yin, Y.2    Schulten, K.3
  • 17
    • 72049092011 scopus 로고    scopus 로고
    • Membrane-bending mechanism of amphiphysin N-BAR domains
    • Arkhipov, A., Y. Yin, and K. Schulten. 2009. Membrane-bending mechanism of amphiphysin N-BAR domains. Biophys. J. 97:2727-2735.
    • (2009) Biophys. J. , vol.97 , pp. 2727-2735
    • Arkhipov, A.1    Yin, Y.2    Schulten, K.3
  • 18
    • 15544366139 scopus 로고    scopus 로고
    • Bar domains and membrane curvature: Bringing your curves to the bar
    • Gallop, J. L., and H. T. McMahon. 2005. BAR domains and membrane curvature: bringing your curves to the BAR. Biochem. Soc. Symp. 72:223-231.
    • (2005) Biochem. Soc. Symp. , vol.72 , pp. 223-231
    • Gallop, J.L.1    McMahon, H.T.2
  • 19
    • 70350011898 scopus 로고    scopus 로고
    • Modeling membrane deformations and lipid demixing upon protein-membrane interaction: The bar dimer adsorption
    • Khelashvili, G., D. Harries, and H. Weinstein. 2009. Modeling membrane deformations and lipid demixing upon protein-membrane interaction: the BAR dimer adsorption. Biophys. J. 97:1626-1635.
    • (2009) Biophys. J. , vol.97 , pp. 1626-1635
    • Khelashvili, G.1    Harries, D.2    Weinstein, H.3
  • 20
    • 33846956769 scopus 로고    scopus 로고
    • A general amphipathic α-helical motif for sensing membrane curvature
    • Drin, G., J.-F. Casella, B. Antonny. 2007. A general amphipathic α-helical motif for sensing membrane curvature. Nat. Struct. Mol. Biol. 14:138-146.
    • (2007) Nat. Struct. Mol. Biol. , vol.14 , pp. 138-146
    • Drin, G.1    Casella, J.-F.2    Antonny, B.3
  • 21
    • 70350783743 scopus 로고    scopus 로고
    • Amphipathic motifs in bar domains are essential for membrane curvature sensing
    • Bhatia, V. K., K. L. Madsen, D. Stamou. 2009. Amphipathic motifs in BAR domains are essential for membrane curvature sensing. EMBO J. 28:3303-3314.
    • (2009) EMBO J. , vol.28 , pp. 3303-3314
    • Bhatia, V.K.1    Madsen, K.L.2    Stamou, D.3
  • 22
    • 70350337096 scopus 로고    scopus 로고
    • How curved membranes recruit amphipathic helices and protein anchoring motifs
    • Hatzakis, N. S., V. K. Bhatia, D. Stamou. 2009. How curved membranes recruit amphipathic helices and protein anchoring motifs. Nat. Chem. Biol. 5:835-841.
    • (2009) Nat. Chem. Biol. , vol.5 , pp. 835-841
    • Hatzakis, N.S.1    Bhatia, V.K.2    Stamou, D.3
  • 23
    • 66349103875 scopus 로고    scopus 로고
    • Simulations of membrane tabulation by lattices of amphiphysin N-BAR domains
    • Yin, Y., A. Arkhipov, and K. Schulten. 2009. Simulations of membrane tabulation by lattices of amphiphysin N-BAR domains. Structure. 17:882-892.
    • (2009) Structure. , vol.17 , pp. 882-892
    • Yin, Y.1    Arkhipov, A.2    Schulten, K.3
  • 24
    • 40049086567 scopus 로고    scopus 로고
    • Structural basis of membrane invagination by f-bar domains
    • Frost, A., R. Perera, V. M. Unger. 2008. Structural basis of membrane invagination by F-BAR domains. Cell. 132:807-817.
    • (2008) Cell. , vol.132 , pp. 807-817
    • Frost, A.1    Perera, R.2    Unger, V.M.3
  • 26
    • 0041784950 scopus 로고    scopus 로고
    • All-atom empirical potential for molecular modeling and dynamics studies of proteins
    • MacKerell, A. D., D. Bashford, D. Karplus. 1998. All-atom empirical potential for molecular modeling and dynamics studies of proteins. J. Phys. Chem. B. 102:3586-3616.
    • (1998) J. Phys. Chem. B. , vol.102 , pp. 3586-3616
    • MacKerell, A.D.1    Bashford, D.2    Karplus, D.3
  • 27
    • 0034250744 scopus 로고    scopus 로고
    • An improved empirical potential energy function for molecular simulations of phospholipids
    • Feller, S. E., and A. D. MacKerell. 2000. An improved empirical potential energy function for molecular simulations of phospholipids. J. Phys. Chem. B. 104:7510-7515.
    • (2000) J. Phys. Chem. B. , vol.104 , pp. 7510-7515
    • Feller, S.E.1    MacKerell, A.D.2
  • 28
    • 33646940952 scopus 로고
    • Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of ν-alkanes
    • Ryckaert, J.-P., G. Ciccotti, and H. J. C. Berendsen. 1977. Numerical integration of the Cartesian equations of motion of a system with constraints: molecular dynamics of ν-alkanes. J. Comput. Phys. 23:327-341.
    • (1977) J. Comput. Phys. , vol.23 , pp. 327-341
    • Ryckaert, J.-P.1    Ciccotti, G.2    Berendsen, H.J.C.3
  • 29
    • 36449007836 scopus 로고
    • Constant pressure molecular dynamics simulation: The langevin piston method
    • Feller, S. E., Y. Zhang, B. R. Brooks. 1995. Constant pressure molecular dynamics simulation: the Langevin piston method. J. Chem. Phys. 103:4613-4621.
    • (1995) J. Chem. Phys. , vol.103 , pp. 4613-4621
    • Feller, S.E.1    Zhang, Y.2    Brooks, B.R.3
  • 30
    • 5544254964 scopus 로고
    • Molecular dynamics simulation for polymers in the presence of a heat bath
    • Grest, G. S., and K. Kremer. 1986. Molecular dynamics simulation for polymers in the presence of a heat bath. Phys. Rev. A. 33:3628-3631.
    • (1986) Phys. Rev. A. , vol.33 , pp. 3628-3631
    • Grest, G.S.1    Kremer, K.2
  • 31
    • 33745559393 scopus 로고    scopus 로고
    • Endophilin bar domain drives membrane curvature by two newly identified structure-based mechanisms
    • Masuda, M., S. Takeda, N. Mochizuki. 2006. Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms. EMBO J. 25:2889-2897.
    • (2006) EMBO J. , vol.25 , pp. 2889-2897
    • Masuda, M.1    Takeda, S.2    Mochizuki, N.3
  • 32
    • 34547554898 scopus 로고    scopus 로고
    • Osmotic coefficients of atomistic nacl (AQ) force fields
    • Hess, B., C. Holm, and N. van der Vegt. 2006. Osmotic coefficients of atomistic NaCl (aq) force fields. J. Chem. Phys. 124:164509.
    • (2006) J. Chem. Phys. , vol.124 , pp. 164509
    • Hess, B.1    Holm, C.2    Vegt Der N.Van3
  • 33
    • 0042783950 scopus 로고    scopus 로고
    • Deriving effective mesoscale potentials from atomistic simulations
    • Reith, D., M. Putz, and F. Muller-Plathe. 2003. Deriving effective mesoscale potentials from atomistic simulations. J. Comput. Chem. 24:1624-1636.
    • (2003) J. Comput. Chem. , vol.24 , pp. 1624-1636
    • Reith, D.1    Putz, M.2    Muller-Plathe, F.3
  • 34
    • 34547474332 scopus 로고    scopus 로고
    • The martini force field: Coarse-grained model for biomolecular simulations
    • Marrink, S. J., H. J. Risselada, A. H. de Vries. 2007. The MARTINI force field: coarse-grained model for biomolecular simulations. J. Phys. Chem. B. 111:7812-7824.
    • (2007) J. Phys. Chem. B. , vol.111 , pp. 7812-7824
    • Marrink, S.J.1    Risselada, H.J.2    De Vries, A.H.3
  • 35
  • 36
    • 85031337723 scopus 로고    scopus 로고
    • Reference deleted in proof.
    • Reference deleted in proof.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.