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Volumn 859, Issue , 2010, Pages 283-288

Utility of next-generation sequencing for analysis of horticultural crop transcriptomes

Author keywords

Annotation; Candidate genes; Expressed sequence tag; Gene prediction; High throughput RNA sequencing; RNA seq; Transcriptome

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; BRACHYPODIUM DISTACHYON; ZEA MAYS;

EID: 77957323107     PISSN: 05677572     EISSN: None     Source Type: Book Series    
DOI: 10.17660/ActaHortic.2010.859.32     Document Type: Conference Paper
Times cited : (5)

References (7)
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    • Applications of ultra-high throughput sequencing
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    • Fox, S.1    Filichkin, S.2    Mockler, T.C.3
  • 3
    • 0036226603 scopus 로고    scopus 로고
    • BLAT - The BLAST-like alignment tool
    • Kent, W.J. 2002. BLAT - the BLAST-like alignment tool. Genome Res. 12:656-664.
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    • Kent, W.J.1
  • 4
    • 53649106195 scopus 로고    scopus 로고
    • Next-generation DNA sequencing
    • Shendure, J. and Ji, H. 2008. Next-generation DNA sequencing. Nature Biotechnol. 26:1135-1145.
    • (2008) Nature Biotechnol. , vol.26 , pp. 1135-1145
    • Shendure, J.1    Ji, H.2
  • 5
    • 77957324761 scopus 로고    scopus 로고
    • The international brachypodium initiative. Genome sequencing and analysis of the model grass Brachypodium distachyon
    • in press
    • The International Brachypodium Initiative. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature. (in press)
    • Nature
  • 6
    • 57749195712 scopus 로고    scopus 로고
    • RNA-Seq: A revolutionary tool for transcriptomics
    • Wang, Z., Gerstein, M. and Snyder, M. 2009. RNA-Seq: A revolutionary tool for transcriptomics. Nat. Rev. Genet. 10:57-63.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 7
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino, D.R. and Birney, E. 2008. Velvet: Algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
    • (2008) Genome Res. , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.