메뉴 건너뛰기




Volumn 42, Issue 10, 2010, Pages 709-716

Large-scale proteome investigation in wild relatives (A, B, and D genomes) of wheat

Author keywords

protein network; proteomics; shotgun analysis; wild relatives of wheat

Indexed keywords

PROTEOME; VEGETABLE PROTEIN;

EID: 77957310721     PISSN: 16729145     EISSN: 17457270     Source Type: Journal    
DOI: 10.1093/abbs/gmq079     Document Type: Article
Times cited : (16)

References (45)
  • 1
    • 77957297418 scopus 로고    scopus 로고
    • Interspecific hybridization for wheat improvement-VIII. Production and cytogenetic analysis of F1 hybrids of wheat with Aegilops ovata
    • Farooq S, Shah TM and Asghar M. Interspecific hybridization for wheat improvement-VIII. Production and cytogenetic analysis of F1 hybrids of wheat with Aegilops ovata. Cer Res Comm 1996, 24: 60-67.
    • (1996) Cer Res Comm , vol.24 , pp. 60-67
    • Farooq, S.1    Shah, T.M.2    Asghar, M.3
  • 2
    • 67649252198 scopus 로고    scopus 로고
    • Investigation of seed storage proteins in some wild wheat progenitors using SDS-PAGE and Acid-PAGE
    • Sofalian O and Valizadeh M. Investigation of seed storage proteins in some wild wheat progenitors using SDS-PAGE and Acid-PAGE. Not Bot Hort Agrobot Cluj 2009, 37: 179-182.
    • (2009) Not Bot Hort Agrobot Cluj , vol.37 , pp. 179-182
    • Sofalian, O.1    Valizadeh, M.2
  • 3
    • 0031828645 scopus 로고    scopus 로고
    • Genetic diversity in wild cereals: Regional and local studies and their bearing on conservation ex situ and in situ
    • Nevo E. Genetic diversity in wild cereals: Regional and local studies and their bearing on conservation ex situ and in situ. Gen Res Crop Evol 1998, 45: 355-370.
    • (1998) Gen Res Crop Evol , vol.45 , pp. 355-370
    • Nevo, E.1
  • 4
    • 0001493598 scopus 로고
    • Manipulation of chromosomal segments from wild wheat for the improvement of bread wheat
    • Appels R and Lagudah ES. Manipulation of chromosomal segments from wild wheat for the improvement of bread wheat. Austral J Plant Physiol 1990, 17: 253-266.
    • (1990) Austral J Plant Physiol , vol.17 , pp. 253-266
    • Appels, R.1    Lagudah, E.S.2
  • 6
    • 0034485106 scopus 로고    scopus 로고
    • Proteomics: A link between genomics, genetics and physiology
    • Zivy M and de Vienne D. Proteomics: A link between genomics, genetics and physiology. Plant Mol Biol 2000, 44: 575-580.
    • (2000) Plant Mol Biol , vol.44 , pp. 575-580
    • Zivy, M.1    De Vienne, D.2
  • 7
    • 84986522852 scopus 로고
    • Concepts and comparisons in multidimensional separation
    • Giddings JC. Concepts and comparisons in multidimensional separation. J High Resol Chromatogr 1987, 10: 319-323.
    • (1987) J High Resol Chromatogr , vol.10 , pp. 319-323
    • Giddings, J.C.1
  • 9
    • 0035106351 scopus 로고    scopus 로고
    • Large-scale analysis of the yeast proteome by multidimensional protein identification technology
    • Washburn MP, Wolters D and Yates JR, III. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat Biotech 2001, 19: 242-247.
    • (2001) Nat Biotech , vol.19 , pp. 242-247
    • Washburn, M.P.1    Wolters, D.2    Yates III, J.R.3
  • 10
    • 0035582244 scopus 로고    scopus 로고
    • An automated multidimensional protein identification technology for shotgun analysis
    • Wolters DA, Washburn MP and Yates JR, III. An automated multidimensional protein identification technology for shotgun analysis. Anal Chem 2001, 73: 5683-5690.
    • (2001) Anal Chem , vol.73 , pp. 5683-5690
    • Wolters, D.A.1    Washburn, M.P.2    Yates III, J.R.3
  • 11
    • 0036767470 scopus 로고    scopus 로고
    • Targeted proteomics of low-level proteins in human plasma by LC/MSn: Using human growth hormone as a model system
    • Wu SL, Amato H, Biringer R, Choudhary G, Shieh P and Hancock WS. Targeted proteomics of low-level proteins in human plasma by LC/MSn: Using human growth hormone as a model system. J Prot Res 2002, 1: 459-465.
    • (2002) J Prot Res , vol.1 , pp. 459-465
    • Wu, S.L.1    Amato, H.2    Biringer, R.3    Choudhary, G.4    Shieh, P.5    Hancock, W.S.6
  • 13
    • 0034987772 scopus 로고    scopus 로고
    • Challenges and prospects of plant proteomics
    • van Wijk KJ. Challenges and prospects of plant proteomics. Plant Physiol 2001, 126: 501-508.
    • (2001) Plant Physiol , vol.126 , pp. 501-508
    • Van Wijk, K.J.1
  • 14
    • 0348206867 scopus 로고
    • Technical improvements in two-dimensional electrophoresis increase the level of genetic variation detected in wheat-seedling proteins
    • Damerval C, de Vienne D, Zivy M and Thiellement H. Technical improvements in two-dimensional electrophoresis increase the level of genetic variation detected in wheat-seedling proteins. Electrophoresis 1986, 7: 52-54.
    • (1986) Electrophoresis , vol.7 , pp. 52-54
    • Damerval, C.1    De Vienne, D.2    Zivy, M.3    Thiellement, H.4
  • 15
    • 63249119658 scopus 로고    scopus 로고
    • The proteome of maize leaves: Use of gene sequences and expressed sequence tag data for identification of proteins with peptide mass fingerprints
    • Porubleva L, Velden KV, Kothari S, Oliver DJ and Chitnis PR. The proteome of maize leaves: Use of gene sequences and expressed sequence tag data for identification of proteins with peptide mass fingerprints. Electrophoresis 2001, 22: 1724-1738.
    • (2001) Electrophoresis , vol.22 , pp. 1724-1738
    • Porubleva, L.1    Velden, K.V.2    Kothari, S.3    Oliver, D.J.4    Chitnis, P.R.5
  • 16
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 1976, 72: 248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.1
  • 17
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227: 680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 18
    • 58149109275 scopus 로고    scopus 로고
    • Proteomic analysis of outer membrane proteins from Acinetobacter baumannii DU202 in tetracycline stress condition
    • Yun SH, Choi CW, Park SH, Lee JC, Leem SH, Choi JS and Kim S, et al. Proteomic analysis of outer membrane proteins from Acinetobacter baumannii DU202 in tetracycline stress condition. J Microbiol 2008, 46: 720-727.
    • (2008) J Microbiol , vol.46 , pp. 720-727
    • Yun, S.H.1    Choi, C.W.2    Park, S.H.3    Lee, J.C.4    Leem, S.H.5    Choi, J.S.6    Kim, S.7
  • 19
    • 33644540488 scopus 로고    scopus 로고
    • Analysis of aromatic catabolic pathways in Pseudomonas putida KT 2440 using a combined proteomic approach: 2-DE/MS and cleavable isotopecoded affinity tag analysis
    • Kim YH, Cho K, Yun SH, Kim JY, Kwon KH, Yoo JS and Kim SI. Analysis of aromatic catabolic pathways in Pseudomonas putida KT 2440 using a combined proteomic approach: 2-DE/MS and cleavable isotopecoded affinity tag analysis. Proteomics 2006, 6: 1301-1318.
    • (2006) Proteomics , vol.6 , pp. 1301-1318
    • Kim, Y.H.1    Cho, K.2    Yun, S.H.3    Kim, J.Y.4    Kwon, K.H.5    Yoo, J.S.6    Kim, S.I.7
  • 20
    • 1242316937 scopus 로고    scopus 로고
    • Proteomic analysis of the effect of heat stress on hexaploid wheat grain: Characterization of heat-responsive proteins from non-prolamins fraction
    • Majoul T, Bancel E, Triboi E, Hamida J and Branlard G. Proteomic analysis of the effect of heat stress on hexaploid wheat grain: Characterization of heat-responsive proteins from non-prolamins fraction. Proteomics 2004, 4: 505-513.
    • (2004) Proteomics , vol.4 , pp. 505-513
    • Majoul, T.1    Bancel, E.2    Triboi, E.3    Hamida, J.4    Branlard, G.5
  • 21
    • 13244258357 scopus 로고    scopus 로고
    • Proteomic analysis of salt responsive proteins in rice root
    • Yan S, Tang Z, Su W and Sun W. Proteomic analysis of salt responsive proteins in rice root. Proteomics 2005, 5: 235-244.
    • (2005) Proteomics , vol.5 , pp. 235-244
    • Yan, S.1    Tang, Z.2    Su, W.3    Sun, W.4
  • 22
    • 17144416797 scopus 로고    scopus 로고
    • A new type of peroxisomal acyl-coenzyme A synthetase from Arabidopsis thaliana has the catalytic capacity to activate biosynthetic precursors of jasmonic acid
    • Schneider K, Kienow L, Schmelzer E, Colby T, Bartsch M, Miersch O and Wasternack C, et al. A new type of peroxisomal acyl-coenzyme A synthetase from Arabidopsis thaliana has the catalytic capacity to activate biosynthetic precursors of jasmonic acid. J Biol Chem 2005, 280: 13962-13972.
    • (2005) J Biol Chem , vol.280 , pp. 13962-13972
    • Schneider, K.1    Kienow, L.2    Schmelzer, E.3    Colby, T.4    Bartsch, M.5    Miersch, O.6    Wasternack, C.7
  • 23
    • 0026262316 scopus 로고
    • Site-directed mutagenesis and expression in Escherichia coli of WMAI-1, a wheat monomeric inhibitor of insect alpha-amylase
    • Garcia-Maroto F, Carbonero P and Garcia-Olmedo F. Site-directed mutagenesis and expression in Escherichia coli of WMAI-1, a wheat monomeric inhibitor of insect alpha-amylase. Plant Mol Biol 1991, 17: 1005-1011.
    • (1991) Plant Mol Biol , vol.17 , pp. 1005-1011
    • Garcia-Maroto, F.1    Carbonero, P.2    Garcia-Olmedo, F.3
  • 24
    • 0025129241 scopus 로고
    • Isolation of complementary DNA clones encoding pathogenesis-related proteins P and Q, two acidic chitinases from tobacco
    • Payne G, Ahl P, Moyer M, Harper A, Beck J, Meins F, Jr and Ryals J. Isolation of complementary DNA clones encoding pathogenesis-related proteins P and Q, two acidic chitinases from tobacco. Proc Natl Acad Sci USA 1990, 87: 98-102.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 98-102
    • Payne, G.1    Ahl, P.2    Moyer, M.3    Harper, A.4    Beck, J.5    Meins Jr., F.6    Ryals, J.7
  • 25
    • 0033197643 scopus 로고
    • A family of antimicrobial peptides is produced by processing of a 7S globulin protein in Macadamia integrifolia kernels
    • Marcus JP, Green JL, Goulter KC and Manners JM. A family of antimicrobial peptides is produced by processing of a 7S globulin protein in Macadamia integrifolia kernels. Plant J 1990, 19: 699-710.
    • (1990) Plant J , vol.19 , pp. 699-710
    • Marcus, J.P.1    Green, J.L.2    Goulter, K.C.3    Manners, J.M.4
  • 26
    • 66649127498 scopus 로고    scopus 로고
    • Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks
    • Reiland S, Messerli G, Baerenfaller K, Gerrits B, Endler A, Grossmann J and Gruissem W, et al. Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks. Plant Physiol 2009, 150: 889-903.
    • (2009) Plant Physiol , vol.150 , pp. 889-903
    • Reiland, S.1    Messerli, G.2    Baerenfaller, K.3    Gerrits, B.4    Endler, A.5    Grossmann, J.6    Gruissem, W.7
  • 27
    • 43949127723 scopus 로고    scopus 로고
    • Metabolic pathways of the wheat (Triticum aestivum) endosperm amyloplast revealed by proteomics
    • Dupont FM. Metabolic pathways of the wheat (Triticum aestivum) endosperm amyloplast revealed by proteomics. BMC Plant Biol 2008, 8: 39.
    • (2008) BMC Plant Biol , vol.8 , pp. 39
    • Dupont, F.M.1
  • 29
    • 33845874376 scopus 로고    scopus 로고
    • Compartmentation in plant metabolism
    • Lunn JE. Compartmentation in plant metabolism. J Exp Bot 2007, 58: 35-47.
    • (2007) J Exp Bot , vol.58 , pp. 35-47
    • Lunn, J.E.1
  • 31
    • 10344242448 scopus 로고    scopus 로고
    • New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy
    • Peltier JB, Ytterberg AJ, Sun Q and van Wijk KJ. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. J Biol Chem 2004, 279: 49367-49383.
    • (2004) J Biol Chem , vol.279 , pp. 49367-49383
    • Peltier, J.B.1    Ytterberg, A.J.2    Sun, Q.3    Van Wijk, K.J.4
  • 36
    • 0344083640 scopus 로고    scopus 로고
    • Altered response to gravity is a peripheral membrane protein that modulates gravity-induced cytoplasmic alkalinization and lateral auxin transport in plant statocytes
    • Boonsirichai K, Sedbrook JC, Chen R, Gilroy S and Masson PH. Altered response to gravity is a peripheral membrane protein that modulates gravity-induced cytoplasmic alkalinization and lateral auxin transport in plant statocytes. Plant Cell 2003, 15: 2612-2625.
    • (2003) Plant Cell , vol.15 , pp. 2612-2625
    • Boonsirichai, K.1    Sedbrook, J.C.2    Chen, R.3    Gilroy, S.4    Masson, P.H.5
  • 37
    • 25444522227 scopus 로고    scopus 로고
    • Molecular chaperones in protein quality control
    • Lee S and Tsai F. Molecular chaperones in protein quality control. J Biochem Mol Biol 2005, 38: 259-265.
    • (2005) J Biochem Mol Biol , vol.38 , pp. 259-265
    • Lee, S.1    Tsai, F.2
  • 38
    • 12444318023 scopus 로고    scopus 로고
    • Activation of hypersensitive cell death by pathogen-induced receptor-like protein kinases from Arabidopsis
    • Chen K, Fan B, Du L and Chen Z. Activation of hypersensitive cell death by pathogen-induced receptor-like protein kinases from Arabidopsis. Plant Mol Biol 2004, 56: 271-283.
    • (2004) Plant Mol Biol , vol.56 , pp. 271-283
    • Chen, K.1    Fan, B.2    Du, L.3    Chen, Z.4
  • 39
    • 36749050378 scopus 로고    scopus 로고
    • Tyrosine-sulfated glycopeptide involved in cellular proliferation and expansion in Arabidopsis
    • Amano Y, Tsubouchi H, Shinohara H, Ogawa M and Matsubayashi Y. Tyrosine-sulfated glycopeptide involved in cellular proliferation and expansion in Arabidopsis. Proc Natl Acad Sci USA 2007, 104: 18333-18338.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 18333-18338
    • Amano, Y.1    Tsubouchi, H.2    Shinohara, H.3    Ogawa, M.4    Matsubayashi, Y.5
  • 40
    • 35148887716 scopus 로고    scopus 로고
    • Phylogenetic and evolutionary implications of complete chloroplast genome sequences of four early-diverging angiosperms: Buxus (Buxaceae), Chloranthus (Chloranthaceae), Dioscorea (Dioscoreaceae), and Illicium (Schisandraceae)
    • Hansen DR. Phylogenetic and evolutionary implications of complete chloroplast genome sequences of four early-diverging angiosperms: Buxus (Buxaceae), Chloranthus (Chloranthaceae), Dioscorea (Dioscoreaceae), and Illicium (Schisandraceae). Mol Phylogenet Evol 2007, 45: 547-563.
    • (2007) Mol Phylogenet Evol , vol.45 , pp. 547-563
    • Hansen, D.R.1
  • 41
    • 0347481383 scopus 로고    scopus 로고
    • Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis
    • Wintz H, Fox T, Wu YY, Feng V, Chen W, Chang HS and Zhu T, et al. Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis. J Biol Chem 2003, 278: 47644-47653.
    • (2003) J Biol Chem , vol.278 , pp. 47644-47653
    • Wintz, H.1    Fox, T.2    Wu, Y.Y.3    Feng, V.4    Chen, W.5    Chang, H.S.6    Zhu, T.7
  • 42
    • 55249103161 scopus 로고    scopus 로고
    • Protein interaction data set highlighted with human ras-mapk/pi3k signaling pathways
    • Wang J, Yuan Y, Zhou Y, Guo L, Zhang L, Kuai X and Deng B, et al. Protein interaction data set highlighted with human ras-mapk/pi3k signaling pathways. J Prot Res 2008, 7: 3879-3889.
    • (2008) J Prot Res , vol.7 , pp. 3879-3889
    • Wang, J.1    Yuan, Y.2    Zhou, Y.3    Guo, L.4    Zhang, L.5    Kuai, X.6    Deng, B.7
  • 44
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: Understanding the cell's functional organization
    • Barabasi AL and Oltvai ZN. Network biology: Understanding the cell's functional organization. Nat Rev Genet 2004, 5: 101-113.
    • (2004) Nat Rev Genet , vol.5 , pp. 101-113
    • Barabasi, A.L.1    Oltvai, Z.N.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.