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Volumn 78, Issue 1, 2010, Pages 173-186

Biochemical analysis of PIFTC3, the Trypanosoma brucei orthologue of nematode DYF-13, reveals interactions with established and putative intraflagellar transport components

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; PROTEIN DYF 13; UNCLASSIFIED DRUG;

EID: 77957241623     PISSN: 0950382X     EISSN: 13652958     Source Type: Journal    
DOI: 10.1111/j.1365-2958.2010.07322.x     Document Type: Article
Times cited : (22)

References (50)
  • 2
    • 64049098228 scopus 로고    scopus 로고
    • A novel function for the atypical small G protein Rab-like 5 in the assembly of sthe trypanosome flagellum
    • Adhiambo, C., Blisnick, T., Toutirais, G., Delannoy, E. Bastin, P. (2009) A novel function for the atypical small G protein Rab-like 5 in the assembly of sthe trypanosome flagellum. J Cell Sci 122 : 834 841.
    • (2009) J Cell Sci , vol.122 , pp. 834-841
    • Adhiambo, C.1    Blisnick, T.2    Toutirais, G.3    Delannoy, E.4    Bastin, P.5
  • 3
    • 0028606916 scopus 로고
    • The Repetitive Microtubule-Associated Proteins MARP-1 and MARP-2 of Trypanosoma brucei
    • Affolter, M., Hemphill, A., Roditi, I., Müller, N. Seebeck, T. (1994) The Repetitive Microtubule-Associated Proteins MARP-1 and MARP-2 of Trypanosoma brucei. J Struct Biol 112 : 241 251.
    • (1994) J Struct Biol , vol.112 , pp. 241-251
    • Affolter, M.1    Hemphill, A.2    Roditi, I.3    Müller, N.4    Seebeck, T.5
  • 4
    • 2342657884 scopus 로고    scopus 로고
    • Decoding cilia function: Defining specialized genes required for compartmentalized cilia biogenesis
    • DOI 10.1016/S0092-8674(04)00412-X, PII S009286740400412X
    • Avidor-Reiss, T., Maer, A.M., Koundakjian, E., Polyanovsky, A., Keil, T., Subramaniam, S. Zuker, C.S. (2004) Decoding cilia function: defining specialized genes required for compartmentalized cilia biogenesis. Cell 117 : 527 539. (Pubitemid 38610237)
    • (2004) Cell , vol.117 , Issue.4 , pp. 527-539
    • Avidor-Reiss, T.1    Maer, A.M.2    Koundakjian, E.3    Polyanovsky, A.4    Keil, T.5    Subramaniam, S.6    Zuker, C.S.7
  • 5
    • 0141706698 scopus 로고    scopus 로고
    • IFT20 Links Kinesin II with a Mammalian Intraflagellar Transport Complex that Is Conserved in Motile Flagella and Sensory Cilia
    • DOI 10.1074/jbc.M300156200
    • Baker, S.A., Freeman, K., Luby-Phelps, K., Pazour, G.J. Besharse, J.C. (2003) IFT20 links kinesin II with a mammalian intraflagellar transport complex that is conserved in motile flagella and sensory cilia. J Biol Chem 278 : 34211 34218. (Pubitemid 37553263)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.36 , pp. 34211-34218
    • Baker, S.A.1    Freeman, K.2    Luby-Phelps, K.3    Pazour, G.J.4    Besharse, J.C.5
  • 7
    • 38449084158 scopus 로고    scopus 로고
    • Intraflagellar transport: From molecular characterisation to mechanism
    • DOI 10.2741/2871
    • Blacque, O.E., Cevik, S. Kaplan, O.I. (2008) Intraflagellar transport: from molecular characterisation to mechanism. Front Biosci 13 : 2633 2652. (Pubitemid 351599709)
    • (2008) Frontiers in Bioscience , vol.13 , Issue.7 , pp. 2633-2652
    • Blacque, O.E.1    Cevik, S.2    Kaplan, O.I.3
  • 8
    • 38149099329 scopus 로고    scopus 로고
    • Characterisation of the plasma membrane subproteome of bloodstream form Trypanosoma brucei
    • Bridges, D.J., Pitt, A.R., Hanrahan, O., Brennan, K., Voorheis, H.P., Herzyk, P., et al. (2008) Characterisation of the plasma membrane subproteome of bloodstream form Trypanosoma brucei. Proteomics 8 : 83 99.
    • (2008) Proteomics , vol.8 , pp. 83-99
    • Bridges, D.J.1    Pitt, A.R.2    Hanrahan, O.3    Brennan, K.4    Voorheis, H.P.5    Herzyk, P.6
  • 9
    • 4143126756 scopus 로고    scopus 로고
    • More than one way to build a flagellum: Comparative genomics of parasitic protozoa [2]
    • DOI 10.1016/j.cub.2004.07.041, PII S0960982204005457
    • Briggs, L.J., Davidge, J.A., Wickstead, B., Ginger, M.L. Gull, K. (2004) More than one way to build a flagellum: comparative genomics of parasitic protozoa. Curr Biol 14 : R611 R612. (Pubitemid 39081651)
    • (2004) Current Biology , vol.14 , Issue.15
    • Briggs, L.J.1    Davidge, J.A.2    Wickstead, B.3    Ginger, M.L.4    Gull, K.5
  • 11
    • 0037744859 scopus 로고    scopus 로고
    • The intraflagellar transport machinery of Chlamydomonas reinhardtii
    • DOI 10.1034/j.1600-0854.2003.t01-1-00103.x
    • Cole, D.G. (2003) The intraflagellar transport machinery of Chlamydomonas reinhardtii. Traffic 4 : 435 442. (Pubitemid 36806154)
    • (2003) Traffic , vol.4 , Issue.7 , pp. 435-442
    • Cole, D.G.1
  • 12
    • 0031750484 scopus 로고    scopus 로고
    • Chlamydomonas kinesin-II-dependent intraflagellar transport (IFT): IFT particles contain proteins required for ciliary assembly in Caenorhabditis elegans sensory neurons
    • Cole, D.G., Diener, D.R., Himelblau, A.L., Beech, P.L., Fuster, J.C. Rosenbaum, J.L. (1998) Chlamydomonas kinesin-II-dependent intraflagellar transport (IFT): IFT particles contain proteins required for ciliary assembly in Caenorhabditis elegans sensory neurons. J Cell Biol 141 : 993 1008.
    • (1998) J Cell Biol , vol.141 , pp. 993-1008
    • Cole, D.G.1    Diener, D.R.2    Himelblau, A.L.3    Beech, P.L.4    Fuster, J.C.5    Rosenbaum, J.L.6
  • 13
    • 69949187195 scopus 로고    scopus 로고
    • DYF-1 is required for assembly of the axoneme in tetrahymena thermophila
    • Dave, D., Wloga, D., Sharma, N. Gaertig, J. (2009) DYF-1 is required for assembly of the axoneme in tetrahymena thermophila. Eukaryot Cell 8 : 1397 1406.
    • (2009) Eukaryot Cell , vol.8 , pp. 1397-1406
    • Dave, D.1    Wloga, D.2    Sharma, N.3    Gaertig, J.4
  • 14
    • 33750514794 scopus 로고    scopus 로고
    • Caenorhabditis elegans DYF-2, an orthologue of human WDR19, is a component of the intraflagellar transport machinery in sensory cilia
    • DOI 10.1091/mbc.E06-04-0260
    • Efimenko, E., Blacque, O.E., Ou, G., Haycraft, C.J., Yoder, B.K., Scholey, J.M., et al. (2006) Caenorhabditis elegans DYF-2, an orthologue of human WDR19, is a component of the intraflagellar transport machinery in sensory cilia. Mol Biol Cell 17 : 4801 4811. (Pubitemid 44665749)
    • (2006) Molecular Biology of the Cell , vol.17 , Issue.11 , pp. 4801-4811
    • Efimenko, E.1    Blacque, O.E.2    Ou, G.3    Haycraft, C.J.4    Yoder, B.K.5    Scholey, J.M.6    Leroux, M.R.7    Swoboda, P.8
  • 15
    • 33644544731 scopus 로고    scopus 로고
    • Functional modulation of IFT kinesins extends the sensory repertoire of ciliated neurons in Caenorhabditis elegans
    • DOI 10.1083/jcb.200509115
    • Evans, J.E., Snow, J.J., Gunnarson, A.L., Ou, G., Stahlberg, H., McDonald, K.L. Scholey, J.M. (2006) Functional modulation of IFT kinesins extends the sensory repertoire of ciliated neurons in Caenorhabditis elegans. J Cell Biol 172 : 663 669. (Pubitemid 43306223)
    • (2006) Journal of Cell Biology , vol.172 , Issue.5 , pp. 663-669
    • Evans, J.E.1    Snow, J.J.2    Gunnarson, A.L.3    Ou, G.4    Stahlberg, H.5    McDonald, K.L.6    Scholey, J.M.7
  • 16
    • 70449517408 scopus 로고    scopus 로고
    • Intraflagellar transport is required for polarized recycling of the TCR/CD3 complex to the immune synapse
    • Finetti, F., Paccani, S.R., Riparbelli, M.G., Giacomello, E., Perinetti, G., Pazour, G.J., et al. (2009) Intraflagellar transport is required for polarized recycling of the TCR/CD3 complex to the immune synapse. Nat Cell Biol 11 : 1332 1339.
    • (2009) Nat Cell Biol , vol.11 , pp. 1332-1339
    • Finetti, F.1    Paccani, S.R.2    Riparbelli, M.G.3    Giacomello, E.4    Perinetti, G.5    Pazour, G.J.6
  • 17
    • 33748327050 scopus 로고    scopus 로고
    • The intraflagellar transport protein ift20 is associated with the golgi complex and is required for cilia assembly
    • Follit, J.A., Tuft, R.A., Fogarty, K.E. Pazour, G.J. (2006) The intraflagellar transport protein ift20 is associated with the golgi complex and is required for cilia assembly. Mol Biol Cell 17 : 3781 3792.
    • (2006) Mol Biol Cell , vol.17 , pp. 3781-3792
    • Follit, J.A.1    Tuft, R.A.2    Fogarty, K.E.3    Pazour, G.J.4
  • 21
    • 0142105416 scopus 로고    scopus 로고
    • Novel roles for the flagellum in cell morphogenesis and cytokinesis of trypanosomes
    • DOI 10.1093/emboj/cdg518
    • Kohl, L., Robinson, D. Bastin, P. (2003) Novel roles for the flagellum in cell morphogenesis and cytokinesis of trypanosomes. EMBO J 22 : 5336 5346. (Pubitemid 37279944)
    • (2003) EMBO Journal , vol.22 , Issue.20 , pp. 5336-5346
    • Kohl, L.1    Robinson, D.2    Bastin, P.3
  • 22
    • 0029585763 scopus 로고
    • The Chlamydomonas kinesin-like protein FLA10 is involved in motility associated with the flagellar membrane
    • 6 I DOI 10.1083/jcb.131.6.1517
    • Kozminski, K., Beech, P. Rosenbaum, J. (1995) The Chlamydomonas kinesin-like protein FLA10 is involved in motility associated with the flagellar membrane. J Cell Biol 131 : 1517 1527. (Pubitemid 26001755)
    • (1995) Journal of Cell Biology , vol.131 , pp. 1517-1527
    • Kozminski, K.G.1    Beech, P.L.2    Rosenbaum, J.L.3
  • 23
    • 37449021665 scopus 로고    scopus 로고
    • Caenorhabditis elegans DYF-11, an orthologue of mammalian Traf3ip1/MIP-T3, is required for sensory cilia formation
    • Kunitomo, H. Iino, Y. (2008) Caenorhabditis elegans DYF-11, an orthologue of mammalian Traf3ip1/MIP-T3, is required for sensory cilia formation. Genes Cells 13 : 13 25.
    • (2008) Genes Cells , vol.13 , pp. 13-25
    • Kunitomo, H.1    Iino, Y.2
  • 26
    • 0026356891 scopus 로고
    • Predicting coiled coils from protein sequences
    • Lupas, A., Van Dyke, M. Stock, J. (1991) Predicting coiled coils from protein sequences. Science 252 : 1162 1164. (Pubitemid 21917026)
    • (1991) Science , vol.252 , Issue.5009 , pp. 1162-1164
    • Lupas, A.1    Van Dyke, M.2    Stock, J.3
  • 27
    • 0035913987 scopus 로고    scopus 로고
    • A trypanosome structure involved in transmitting cytoplasmic information during cell division
    • DOI 10.1126/science.1063775
    • Moreira-Leite, F.F., Sherwin, T., Kohl, L. Gull, K. (2001) A trypanosome structure involved in transmitting cytoplasmic information during cell division. Science 294 : 610 612. (Pubitemid 32999560)
    • (2001) Science , vol.294 , Issue.5542 , pp. 610-612
    • Moreira-Leite, F.F.1    Sherwin, T.2    Kohl, L.3    Gull, K.4
  • 28
    • 13844271969 scopus 로고    scopus 로고
    • The dyf-3 gene encodes a novel protein required for sensory cilium formation in Caenorhabditis elegans
    • DOI 10.1016/j.jmb.2004.12.005
    • Murayama, T., Toh, Y., Ohshima, Y. Koga, M. (2005) The dyf-3 gene encodes a novel protein required for sensory cilium formation in Caenorhabditis elegans. J Mol Biol 346 : 677 687. (Pubitemid 40247710)
    • (2005) Journal of Molecular Biology , vol.346 , Issue.3 , pp. 677-687
    • Murayama, T.1    Toh, Y.2    Ohshima, Y.3    Koga, M.4
  • 30
    • 0030910012 scopus 로고    scopus 로고
    • Assessment of the Alamar Blue assay for cellular growth and viability in vitro
    • DOI 10.1016/S0022-1759(97)00043-4, PII S0022175997000434
    • Nakayama, G.R., Caton, M.C., Nova, M.P. Parandoosh, Z. (1997) Assessment of the Alamar Blue assay for cellular growth and viability in vitro. J Immunol Methods 204 : 205 208. (Pubitemid 27262014)
    • (1997) Journal of Immunological Methods , vol.204 , Issue.2 , pp. 205-208
    • Nakayama, G.R.1    Caton, M.C.2    Nova, M.P.3    Parandoosh, Z.4
  • 31
    • 43149102968 scopus 로고    scopus 로고
    • Elipsa is an early determinant of ciliogenesis that links the IFT particle to membrane-associated small GTPase Rab8
    • Omori, Y., Zhao, C., Saras, A., Mukhopadhyay, S., Kim, W., Furukawa, T., et al. (2008) Elipsa is an early determinant of ciliogenesis that links the IFT particle to membrane-associated small GTPase Rab8. Nat Cell Biol 10 : 437 444.
    • (2008) Nat Cell Biol , vol.10 , pp. 437-444
    • Omori, Y.1    Zhao, C.2    Saras, A.3    Mukhopadhyay, S.4    Kim, W.5    Furukawa, T.6
  • 32
    • 23144445446 scopus 로고    scopus 로고
    • Functional coordination of intraflagellar transport motors
    • DOI 10.1038/nature03818
    • Ou, G., Blacque, O., Snow, J.J., Leroux, M.R. Scholey, J.M. (2005a) Functional coordination of intraflagellar transport motors. Nature 436 : 583 587. (Pubitemid 41112934)
    • (2005) Nature , vol.436 , Issue.7050 , pp. 583-587
    • Ou, G.1    Blacque, O.E.2    Snow, J.J.3    Leroux, M.R.4    Scholey, J.M.5
  • 33
    • 20144371855 scopus 로고    scopus 로고
    • The PKD protein qilin undergoes intraflagellar transport
    • DOI 10.1016/j.cub.2005.05.044, PII S0960982205005592
    • Ou, G., Qin, H., Rosenbaum, J.L. Scholey, J.M. (2005b) The PKD protein qilin undergoes intraflagellar transport. Curr Biol 15 : R410 R411. (Pubitemid 40772136)
    • (2005) Current Biology , vol.15 , Issue.11
    • Ou, G.1    Qin, H.2    Rosenbaum, J.L.3    Scholey, J.M.4
  • 35
    • 12944269065 scopus 로고
    • Rapid identification of proteins by peptide-mass fingerprinting
    • Pappin, D.J., Hojrup, P. Bleasby, A.J. (1993) Rapid identification of proteins by peptide-mass fingerprinting. Curr Biol 3 : 327 332.
    • (1993) Curr Biol , vol.3 , pp. 327-332
    • Pappin, D.J.1    Hojrup, P.2    Bleasby, A.J.3
  • 36
    • 35848952293 scopus 로고    scopus 로고
    • The zebrafish fleer gene encodes an essential regulator of cilia tubulin polyglutamylation
    • DOI 10.1091/mbc.E07-06-0537
    • Pathak, N., Obara, T., Mangos, S., Liu, Y. Drummond, I.A. (2007) The zebrafish fleer gene encodes an essential regulator of cilia tubulin polyglutamylation. Mol Biol Cell 18 : 4353 4364. (Pubitemid 350060164)
    • (2007) Molecular Biology of the Cell , vol.18 , Issue.11 , pp. 4353-4364
    • Pathak, N.1    Obara, T.2    Mangos, S.3    Liu, Y.4    Drummond, I.A.5
  • 37
    • 0033535044 scopus 로고    scopus 로고
    • The DHC1b (DHC2) isoform of cytoplasmic dynein is required for flagellar assembly
    • DOI 10.1083/jcb.144.3.473
    • Pazour, G.J., Dickert, B.L. Witman, G.B. (1999) The DHC1b (DHC2) Isoform of cytoplasmic dynein is required for flagellar assembly. J Cell Biol 144 : 473 481. (Pubitemid 29234527)
    • (1999) Journal of Cell Biology , vol.144 , Issue.3 , pp. 473-481
    • Pazour, G.J.1    Dickert, B.L.2    Witman, G.B.3
  • 38
    • 22244458310 scopus 로고    scopus 로고
    • Proteomic analysis of a eukaryotic cilium
    • DOI 10.1083/jcb.200504008
    • Pazour, G.J., Agrin, N., Leszyk, J. Witman, G.B. (2005) Proteomic analysis of a eukaryotic cilium. J Cell Biol 170 : 103 113. (Pubitemid 40994100)
    • (2005) Journal of Cell Biology , vol.170 , Issue.1 , pp. 103-113
    • Pazour, G.J.1    Agrin, N.2    Leszyk, J.3    Witman, G.B.4
  • 40
    • 0037466382 scopus 로고    scopus 로고
    • RNAit: An automated web-based tool for the selection of RNAi targets in Trypanosoma brucei
    • DOI 10.1016/S0166-6851(03)00045-8
    • Redmond, S., Vadivelu, J. Field, M.C. (2003) RNAit: an automated web-based tool for the selection of RNAi targets in Trypanosoma brucei. Mol Biochem Parasitol 128 : 115 118. (Pubitemid 36423437)
    • (2003) Molecular and Biochemical Parasitology , vol.128 , Issue.1 , pp. 115-118
    • Redmond, S.1    Vadivelu, J.2    Field, M.C.3
  • 41
    • 33750435152 scopus 로고    scopus 로고
    • IFTA-2 is a conserved cilia protein involved in pathways regulating longevity and dauer formation in Caenorhabditis elegans
    • Schafer, J.C., Winkelbauer, M.E., Williams, C.L., Haycraft, C.J., Desmond, R.A. Yoder, B.K. (2006) IFTA-2 is a conserved cilia protein involved in pathways regulating longevity and dauer formation in Caenorhabditis elegans. J Cell Sci 119 : 4088 4100.
    • (2006) J Cell Sci , vol.119 , pp. 4088-4100
    • Schafer, J.C.1    Winkelbauer, M.E.2    Williams, C.L.3    Haycraft, C.J.4    Desmond, R.A.5    Yoder, B.K.6
  • 42
    • 7944222301 scopus 로고    scopus 로고
    • Two anterograde intraflagellar transport motors cooperate to build sensory cilia on C. elegans neurons
    • DOI 10.1038/ncb1186
    • Snow, J.J., Ou, G., Gunnarson, A.L., Walker, M.R.S., Zhou, H.M., Brust-Mascher, I. Scholey, J.M. (2004) Two anterograde intraflagellar transport motors cooperate to build sensory cilia on C. elegans neurons. Nat Cell Biol 6 : 1109 1113. (Pubitemid 39468012)
    • (2004) Nature Cell Biology , vol.6 , Issue.11 , pp. 1109-1113
    • Snow, J.J.1    Ou, G.2    Gunnarson, A.L.3    Walker, M.R.S.4    Zhou, H.M.5    Brust-Mascher, I.6    Scholey, J.M.7
  • 46
    • 39049118320 scopus 로고    scopus 로고
    • Differential expression of glycosomal and mitochondrial proteins in the two major life-cycle stages of Trypanosoma brucei
    • DOI 10.1016/j.molbiopara.2007.12.008, PII S0166685107003441
    • Vertommen, D., Van Roy, J., Szikora, J., Rider, M.H., Michels, P.A.M. Opperdoes, F.R. (2008) Differential expression of glycosomal and mitochondrial proteins in the two major life-cycle stages of Trypanosoma brucei. Mol Biochem Parasitol 158 : 189 201. (Pubitemid 351248782)
    • (2008) Molecular and Biochemical Parasitology , vol.158 , Issue.2 , pp. 189-201
    • Vertommen, D.1    Van Roy, J.2    Szikora, J.-P.3    Rider, M.H.4    Michels, P.A.M.5    Opperdoes, F.R.6
  • 47
    • 65549169874 scopus 로고    scopus 로고
    • Intraflagellar transport (IFT) protein IFT25 is a phosphoprotein component of IFT complex B and physically interacts with IFT27 in Chlamydomonas
    • Wang, Z., Fan, Z., Williamson, S.M. Qin, H. (2009) Intraflagellar transport (IFT) protein IFT25 is a phosphoprotein component of IFT complex B and physically interacts with IFT27 in Chlamydomonas. PLoS ONE 4 : e5384.
    • (2009) PLoS ONE , vol.4
    • Wang, Z.1    Fan, Z.2    Williamson, S.M.3    Qin, H.4
  • 48
    • 0032531835 scopus 로고    scopus 로고
    • Regulated processive transcription of chromatin by T7 RNA polymerase in Trypanosoma brucei
    • DOI 10.1093/nar/26.20.4626
    • Wirtz, E., Hoek, M. Cross, G. (1998) Regulated processive transcription of chromatin by T7 RNA polymerase in Trypanosoma brucei. Nucleic Acids Res 26 : 4626 4634. (Pubitemid 28466609)
    • (1998) Nucleic Acids Research , vol.26 , Issue.20 , pp. 4626-4634
    • Wirtz, E.1    Hoek, M.2    Cross, G.A.M.3
  • 49
    • 0033525524 scopus 로고    scopus 로고
    • A tightly regulated inducible expression system for conditional gene knock-outs and dominant-negative genetics in Trypanosoma brucei
    • DOI 10.1016/S0166-6851(99)00002-X, PII S016668519900002X
    • Wirtz, E., Leal, S., Ochatt, C. Cross, G.A.M. (1999) A tightly regulated inducible expression system for conditional gene knock-outs and dominant-negative genetics in Trypanosoma brucei. Mol Biochem Parasitol 99 : 89 101. (Pubitemid 29127189)
    • (1999) Molecular and Biochemical Parasitology , vol.99 , Issue.1 , pp. 89-101
    • Wirtz, E.1    Leal, S.2    Ochatt, C.3    Cross, G.A.M.4
  • 50
    • 34547590810 scopus 로고    scopus 로고
    • Functional dissection of Rab GTPases involved in primary cilium formation
    • DOI 10.1083/jcb.200703047
    • Yoshimura, S., Egerer, J., Fuchs, E., Haas, A.K. Barr, F.A. (2007) Functional dissection of Rab GTPases involved in primary cilium formation. J Cell Biol 178 : 363 369. (Pubitemid 47196146)
    • (2007) Journal of Cell Biology , vol.178 , Issue.3 , pp. 363-369
    • Yoshimura, S.-I.1    Egerer, J.2    Fuchs, E.3    Haas, A.K.4    Barr, F.A.5


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