Chapter 14 Photomovement of microorganisms in benthic and soil microenvironments

Comprehensive Series in Photosciences

Volumn 1, Issue C, 2001, Pages 403-420

  Garcia Pichel, Ferran ^a   Castenholz, Richard W ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

EID: 77957053090     PISSN: 1568461X     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S1568-461X(01)80018-1     Document Type: Article

References (65)

1. Armitage J.P. Behavioural responses of bacteria to light and oxygen. Arch. Microbiol. 168 (1997) 249-261
2. Duffy K.J., and Ford R.M. Turn angle and run time characterize swimming behavior in Pseudomonas putida. J. Bacteriol. 179 (1997) 1428-1430
3. Jørgensen B.B., and Des Marais D.J. A simple fiber-optic microprobe for high resolution light measurements. Limnol. Oceanogr. 31 (1986) 1376-1383
4. Pierson B.K., Sands V.M., and Frederick J.L. Spectral irradiance and distribution of pigments in a highly layered microbial mat. Appl. Environm. Microbiol. 56 (1990) 2327-2340
5. Lassen C., Ploug H., and Jørgensen B.B. A fiber-optic scalar irradiance microsensor: application for spectral light measurements in sediments. FEMS Microbiol. Ecol. 86 (1992) 247-254
6. Garcia-Pichel F. A scalar irradiance fiber-optic microprobe for the measurement of ultraviolet radiation at high spatial resolution. Photochem. Photobiol. 61 (1995) 248-254
7. Jørgensen B.B., and Des Marais D.J. Optical properties of benthic photosynthetic communities: fiber-optic studies of cyanobacterial mats. Limnol. Oceanogr. 33 (1988) 99-113
8. Kühl M., and Jørgensen B.B. Spectral light measurements in microbenthic phototrophic communities with a fiber-optic microprobe coupled to a sensitive diode array detector. Limnol. Oceanogr. 37 (1992) 1813-1823
9. Kühl M., and Jørgensen B.B. The light field of microbenthic communities: radiance distribution and microscale optics of sandy coastal sediments. Limnol. Oceanogr. 39 (1994) 1368-1398
10. Garcia-Pichel F., and Bebout B.M. The penetration of ultraviolet radiation into shallow water sediments: high exposure for photosynthetic communities. Mar. Ecol. Progress Ser. 131 (1996) 257-262
11. Garcia-Pichel F., and Belnap J. Microenvironments and microscale productivity of cyanobacterial desert crusts. J. Phycol. 32 (1996) 774-782
12. Jørgensen B.B., Cohen Y., and Marais D.J.D. Photosynthetic action spectra and adaptation to spectral light distribution in a benthic cyanobacterial mat. Appl. Environm. Microbiol. 53 (1987) 879-886
13. Pierson B.K., Oesterle A., and Murphy G.L. Pigments, light penetration and photosynthetic activity in the multi-layered microbial mats of Great Sippewissett Salt Marsh, Massachusetts. FEMS Microbiol. Ecol. 45 (1987) 365-376
14. Winogradsky S. Über Schwefelbakterien. Bot. Ztg. 45 (1887) 489-610
15. Fauré-Fremiet E. The tidal rhythm of the diatom Hantzschia amphioxys. Biol. Bull. 100 (1951) 17-33
16. Castenholz R.W. The behavior of Oscillatoria terebriformis in hot springs. J. Phycol. 4 (1968) 132-139
17. Brock T.D. Effect of water potential on a Microcoleus (Cyanophyceae) from a desert crust. J. Phycol. 11 (1975) 316-320
18. Happey-Wood C.M. Vertical migration patterns of flagellates in a community of freshwater benthic algae. Hydrobiologia 161 (1988) 99-124
19. Nelson D.C., and Castenholz R.W. Light responses in Beggiatoa. Arch. Microbiol. 131 (1982) 146-155
20. Giovannoni S.J., Schabtach E., and Castenholz R.W. Isosphaera pallida, gen. and comb. nov, a gliding, budding eubacterium from hot springs. Arch. Microbiol. 147 (1987) 276-284
21. Garcia-Pichel F., Mechling M., and Castenholz R.W. Diel migrations of microorganisms within a benthic, hypersaline mat community. Appl. Environm. Microbiol. 60 (1994) 1500-1511
22. Krekeler D., Teske A., and Cypionka H. Strategies of sulfate-reducing bacteria to escape oxygen stress in cyanobacterial mats. FEMS Microbiol. Ecol. 25 (1998) 89-96
23. Richardson L.L., and Castenholz R.W. Diel vertical movements of the cyanobacterium Oscillatoria terebriformis in a sulfide-rich hot spring microbial mat. Appl. Environm. Microbiol. 53 (1987) 2142-2150
24. Castenholz R.W., Jørgensen B.B., D'Amelio E., and Bauld J. Photosynthetic and behavioral versatility of the cyanobacterium Oscillatoria boryana in a sulfide-rich microbial mat. FEMS Microbiol. Ecol. 86 (1991) 45-58
25. Whale G.F., and Walsby A.E. Motility of the cyanobacterium Microcoleus chthonoplastes in mud. Br. Phycol. J. 19 (1984) 117-123
26. Pinckney J., Piceno Y., and Lowell C.R. Short-term changes in the vertical distribution of benthic microalgal biomass in intertidal muddy sediments. Diatom Res. 9 (1994) 143-153
27. Wulff A., Sundbäck K., Nilsson C., Carlson L., and Jonsson B. Effect of sediment load on the microbenthic community of a shallow water sandy sediment. Estuaries 20 (1997) 547-558
28. Pentecost A. Effects of sedimentation and light intensity on mat-forming Oscillatoriaceae with particular reference to Microcoleus lyngyaceus Gomont. J. Gen. Microbiol. 130 (1984) 983-990
29. Nadeau T.-L., Howard-Williams C., and Castenholz R.W. Effects of solar UV and visible irradiance on photosynthesis and vertical migration of Oscillatoria sp (Cyanobacteria) in an Antarctic microbial mat. Aquat. Microb. Ecol. 20 (1999) 213-243
30. Davey M.C., and Clarke K.J. The spatial distribution of microalgae on Antarctic fellfield soils. Antarctic Sci. 3 (1991) 257-264
31. Kruschel C., and Castenholz R.W. The effect of solar UV and visible irradiance on the vertical movements of cyanobacteria in microbial mats of hypersaline waters. FEMS Microbiol. Ecol. 27 (1988) 53-72
32. Richardson L.L., and Castenholz R.W. Chemokinetic motility responses of the cyanobacterium Oscillatoria terebriformis. Appl. Environm. Microbiol. 55 (1989) 261-263
33. Jørgensen B.B. Ecology of the bacteria of the sulphur cycle with special reference to anoxic-oxic interface environments. Philos. Trans. R. Soc. London Ser. B 298 (1982) 543-561
34. Jue C.-S. The effect of aerobic environments on Chromatium cf. tepidum, a thermophilic purple sulfur bacterium. M.A. Thesis (1990), University of Oregon Eugene, Oregon, USA
35. Kühl M., Lassen C., and Jørgensen B.B. Optical properties of microbial mats: Light measurements with fiber optic microprobes. In: Stal L.J., and Caumette P. (Eds). Microbial Mats. Structure, Development and Environmental Significance (1994), Springer-Verlag, Berlin 149-166
36. Harper M.A. Movements. In: Werner D. (Ed). The biology of diatoms (1977), University of California Press, Berkeley 224-249
37. Round F.E., and Palmer J.D. Persistent vertical migration rhythms in benthic microflora. II. Field and laboratory studies on diatoms from the bank of the river Avon. J. Mar. Biol. Assoc. UK 46 (1966) 191-224
38. Happey-Wood C.M., and Jones P. Rhythms of vertical migration and motility in intertidal benthic diatoms with particular reference to Pleurosigma angulatum. Diatom Res. 3 (1988) 89-93
39. Hay S.I., Maitland T.C., and Patterson D.M. The speed of diatom migration through natural and artificial substrata. Diatom Res. 8 (1993) 371-384
40. Eaton J.W., and Moss B. The estimation of numbers and pigment content in epipelic algal populations. Limnol. Ocean. 11 (1966) 584-594
41. Serôdio J., Silva J.M.D., and Catarino F. Nondestructive tracing of migratory rhythms of intertidal benthic microalgae using in vivo chlorophyll a fluorescence. J. Phycol. 33 (1997) 542-553
42. Patterson D.M. The migratory behaviour of diatom assemblages in a laboratory tidal micro-ecosystem studied by low-temperature scanning electron microscopy. Diatom Res. 1 (1986) 227-239
43. Round F.E., and Eaton J.W. Persistent, vertical migration rhythms in benthic microflora. III the rhythm of epipelic algae in a freshwater pond. J. Ecol. 55 (1966) 609-615
44. 2S and pH profiles of a microbial mat. Limnol. Oceanogr. 28 (1983) 1062-1074
45. Malin G., and Walsby A.E. Chemotaxis of a cyanobacterium on concentration gradients of carbon dioxide, bicarbonate and oxygen. J. Gen. Microbiol. 131 (1985) 2643-2652
46. Nultsch W. Phototactic and photokinetic action spectra of the diatom Nitzschia communis. Photochem. Photobiol. 14 (1971) 705-712
47. Häder D.-P. Photosensory behavior in prokaryotes. Microbiol. Rev. 51 (1987) 1-21
48. Hegemann P. Vision in microalgae. Planta 203 (1997) 265-274
49. Castenholz R.W. Motility and Taxes. In: Carr N.G., and Whitton B.A. (Eds). The biology of cyanobacteria (1982), Blackwell Sci. Pub., Oxford, England 413-440
50. Mrozek C. Physical and chemical factors influencing the phototactic steering response in Lyngbya sp. (U-Sara.-L). M.A. Thesis (1990), University of Oregon Eugene, Oregon, USA
51. Prufert-Bebout L. Environmental controls on cyanobacterial distribution: the role of irradiance. Ph.D. Thesis (1998), Aarhus University, Aarhus, Denmark
52. Prufert-Bebout L., and Garcia-Pichel F. Field and cultivated Microcoleus chthonoplastes: The search for clues to its prevalence in marine microbial mats. In: Stal L.J., and Caumette P. (Eds). Microbial Mats. Structure, Development and Environmental Significance (1994), Springer-Verlag, Heidelberg 111-116
53. Fritsch F.E. The terrestrial algae. J. Ecol. 10 (1922) 220-236
54. Cohn S.A., and Weitzell R.E. Ecological considerations of diatom cell motility. I. Characterization of motility and adhesion of four diatom species. J. Phycol. 32 (1996) 928-939
55. Ramsing N.B., and Prufert-Bebout L. Motility of Microcoleus chthonoplastes subjected to different light intensities quantified by digital image analysis. In: Stal L.J., and Caumette P. (Eds). Microbial Mats. Structure, Development and Environmental Significance. NATO ASI Series (1994), Springer Verlag, Heidelberg 183-192
56. Garcia-Pichel F., and Castenholz R.W. On the significance of solar ultraviolet radiation for the ecology of microbial mats. In: Stal L.J., and Caumette P. (Eds). Microbial Mats Structure, Development and Environmental Significance (1994), Springer-Verlag, Heidelberg 77-84
57. Bebout B.M., and Garcia-Pichel F. UVB-induced vertical migrations of cyanobacteria in a microbial mat. Appl. Environm. Microbiol. 61 (1995) 4215-4222
58. Jørgensen B.B., Revsbech N.P., and Cohen Y. Photosynthesis and structure of benthic microbial mats: microelectrode and SEM studies of four cyanobacterial communities. Limnol. Ocean. 28 (1983) 1075-1093
59. Simon R.D. Gliding motility in Aphanothece halophytica: analysis of wall proteins in mot mutants. J. Bacteriol. 148 (1981) 315-321
60. Ramsing N.B., Ferris M.J., and Ward D.M. Light-induced motility of thermophilic Synechococcus isolates from Octopus Spring, Yellowstone National Park. App. Environm. Microbiol. 63 (1997) 2347-2354
61. Garcia-Pichel F., Nübel U., and Muyzer G. The phylogeny of unicellular, extremely halotolerant cyanobacteria. Arch. Microbiol. 169 (1998) 469-482
62. Hernández-Muñiz W., and Stevens Jr. S.E. Characterization of the motile hormogonia of Mastigocladus laminosus. J. Bacteriol. 169 (1987) 218-223
63. Castenholz R.W. Aggregation in a thermophilic Oscillatoria. Nature 215 (1967) 1285-1286
64. Underwood G.J.C., Nilsson C., Sundbäck K., and Wulff A. Short-term effects of UVB radiation on chlorophyll fluorescence, biomass, pigments and carbohydrate fractions in a benthic diatom mat. J. Phycol. 35 (1999) 656-666
65. Castenholz R.W., and Garcia-Pichel F. In: Whitton B.A., and Potts M. (Eds). Ecology of Cyanobacteria: Their Diversity in Time and Space (2000) (1999), Kluwer Sci. Publ., Dordrecht, The Netherlands 591-612