Development of a time-gated system for Raman spectroscopy of biological samples

Optics Express

Volumn 18, Issue 19, 2010, Pages 20049-20058

  Knorr, Florian ^a   Smith, Zachary J ^a   Wachsmann Hogiu, Sebastian ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GATING AND FEEDING; RAMAN SPECTROSCOPY; TOLUENE;

ALL-OPTICAL SWITCHING; BIOLOGICAL SAMPLES; ENERGY PER PULSE; GATING EFFICIENCY; HIGH QUALITY; HIGH SNR; ORDERS OF MAGNITUDE; PERYLENES; PHOTO-DAMAGE THRESHOLD; PICOSECONDS; POWER CONSERVATION; PROOF OF CONCEPT; RAMAN SPECTRA; TIME GATING; WAVE NUMBERS;

RAMAN SCATTERING;

BIOPOLYMER;

ARTICLE; EQUIPMENT; EQUIPMENT DESIGN; INSTRUMENTATION; LASER; RAMAN SPECTROMETRY; SIGNAL PROCESSING;

BIOPOLYMERS; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; LASERS; SIGNAL PROCESSING, COMPUTER-ASSISTED; SPECTRUM ANALYSIS, RAMAN;

EID: 77957001485     PISSN: None     EISSN: 10944087     Source Type: Journal    
DOI: 10.1364/OE.18.020049     Document Type: Article

References (33)

1. M. Gniadecka, P. A. Philipsen, S. Sigurdsson, S. Wessel, O. F. Nielsen, D. H. Christensen, J. Hercogova, K. Rossen, H. K. Thomsen, R. Gniadecki, L. K. Hansen, and H. C. Wulf, "Melanoma diagnosis by Raman spectroscopy and neural networks: Structure alterations in proteins and lipids in intact cancer tissue," J. Invest. Dermatol. 122, 443-449 (2004).
2. A. Nijssen, T. C. B. Schut, F. Heule, P. J. Caspers, D. P. Hayes, M. H. A. Neumann, and G. J. Puppels, "Discriminating basal cell carinoma from its surrounding tissue by Raman spectroscopy," J. Invest. Dermatol. 119, 64-69 (2002).
3. C. A. Lieber, S. K. Majumder, D. Billheimer, D. L. Ellis, and A. Mahadevan-Jansen, "Raman microspectroscopy for skin cancer detection in vitro," J. Biomed. Opt. 13, 024013 (2008).
4. K. Chen, Y. Qin, F. Zheng, M. Sun, and D. Shi, "Diagnosis of colorectal cancer using Raman spectroscopy of laser-trapped single living epithelial cells," Opt. Lett. 31, 2015-2017 (2006).
5. J. W. Chan, D. S. Taylor, S. M. Lane, T. Zwerdling, J. Tuscano, and T. Huser, "Nondestructive identification of individual leukemia cells by laser trapping Raman spectroscopy," Anal. Chem. 80, 2180-2187 (2008).
6. Q. Y. Zhu, R. G. Quivey, and A. J. Berger, "Measurement of bacterial concentration fractions in polymicrobial mixtures by Raman microspectroscopy, " J. Biomed. Opt. 9, 1182-1186 (2004).
7. P. Rösch, M. Harz, M. Schmitt, K.-D. Peschke, O. Ronneberger, H. Burkhardt, H.-W. Motzkus, M. Lankers, S. Hofer, H. Thiele, and J. Pöpp, "Chemotaxonomic identification of single bacteria by micro-Raman spectroscopy: Application to clean-room-relevant biological contaminations, " Appl. Environ. Microb. 71, 1626-1637 (2005).
8. T. J. Moritz, D. S. Taylor, C. R. Polage, D. Krol, S. M. Lane, and J. W. Chan, "Raman spectroscopic signatures of the metabolic states of escherichia coli cells and their dependence on antibiotics treatment," Biophys. J. 98, 742a (2010).
9. K. A. Dehring, N. J. Crane, A. R. Smukler, J. B. McHugh, B. J. Roessler, and M. D. Morris, "Identifying chemical changes in subchondral bone taken from murine knee joints using Raman spectroscopy," Appl. Spectrosc. 60, 1134-1141 (2006).
10. D. Qi and A. J. Berger, "Chemical concentration measurement in blood serum and urine samples using liquidcore optical fiber Raman spectroscopy," Appl. Spectrosc. 46, 1726-1734 (2007).
11. A. P. Shreve, N. J. Cherepy, and R. A. Mathies, "Effective rejection of fluorescence interference in raman spectroscopy using a shifted excitation difference technique," Appl. Spectrosc. 46, 707-711 (1992).
12. C. A. Lieber and A. Mahadevan-Jansen, "Automated method for subtraction of fluorescence from biological Raman spectra," Appl. Spectrosc. 57, 1363-1367 (2003).
13. B. D. Beier and A. J. Berger, "Method for automated background subtraction from raman spectra containing known contaminants," The Analyst 134, 1198-1202 (2009).
14. A. C. De Luca, M. Mazilu, A. Riches, C. S. Herrington, and K. Dholakia, "Online fluorescence suppression in modulated raman spectroscopy," Anal. Chem. 82, 738-745 (2010).
15. P. Matousek, M. Towrie, A. Stanley, and A. W. Parker, "Efficient rejection of fluorescence from Raman spectra using picosecond Kerr gating," Appl. Spectrosc. 53, 1485-1489 (1999).
16. P. Matousek, M. Towrie, C. Ma,W. M. Kwok, D. Phillips,W. T. Toner, and A.W. Parker, "Fluorescence suppression in resonance Raman spectroscopy using a high-performance picosecond Kerr gate," J. Raman Spectrosc. 32, 983-988 (2001).
17. J. Dyer, W. J. Blau, C. G. Coates, C. M. Creely, J. D. Gavey, M. W. George, D. C. Grills, S. Hudson, J. M. Kelly, P. Matousek, J. J. McGarvey, J. McMaster, A. W. Parker, M. Towrie, and J. A. Weinstein, "The photophysics of fac-[Re(CO)3(dppz)(py)]+ in CH3CN: a comparative picosecond flash photolysis, transient infrared, transient resonance Raman and density functional theoretical study," Photoch. Photobio. Sci. 2, 542-554 (2003).
18. M. D. Morris, P. Matousek, M. Towrie, A. W. Parker, A. E. Goodship, and E. R. C. Draper, "Kerr-gated timeresolved Raman spectroscopy of equine cortical bone tissue," J. Biomed. Opt. 10, 014014 (2005).
19. R. Baker, P. Matousek, K. L. Ronayne, A. W. Parker, K. Rogers, and N. Stone, "Depth profiling of calcifications in breast tissue using picosecond Kerr-gated Raman spectroscopy," The Analyst 132, 48-53 (2007).
20. V. V. Yakovlev, "Time-gated confocal Raman microscopy," Spectroscopy 22, 41-45 (2007).
21. P. Matousek, "Deep non-invasive Raman spectroscopy of living tissue and powders," Chem. Soc. Rev. 36 (2007).
22. F. H. Loesel, J. P. Fischer, M. H. Götz, C. Horvath, T. Juhasz, F. Noack, N. Suhm, and J. F. Bille, "Non-thermal ablation of neural tissue with femtosecond laser pulses," Appl. Phys. B: Lasers O. 66, 121-128 (1998).
23. N. Gierlinger and M. Schwanninger, "Chemical imaging of poplar wood cell walls by confocal Raman microscopy," Plant Physiol. 140, 1246-1254 (2006).
24. M. Schmidt, A. M. Schwartzberg, A. Carroll, A. Chaibang, P. D. Adams, and P. J. Schuck, "Raman imaging of cell wall polymers in Aradopsis thaliana," Biochem. and Bioph. Res. Co. 395, 521-523 (2010).
25. R. L. Sutherland, D. G. McLean, and S. Kirkpatrick, Handbook of Nonlinear Optics (Marcel Dekker, New York, NY, 2003).
26. R. A. Ganeev, A. I. Ryasnyanskii, and H. Kuroda, "Nonlinear optical characteristics of carbon disulfide," Opt. Spectrosc. 100, 108-118 (2006).
27. A. G. Vitukhnovsky, M. I. Sluch, J. G. Warren, and M. C. Petty, "The fluorescence of perylene-doped langmuir- blodgett films," Chem. Phys. Lett. 173, 425-429 (1990).
28. J. K.Wilmshurst and H. J. Bernstein, "The infrared and Raman spectra of toluene, toleuene-α-d3, m-xylene, and m-xylene-α α'-d16 ," Can. J. Chemistry 35, 911-925 (1957).
29. E. M. Rubin, "Genomics of cellulosic biofuels," Nature 454, 841-845 (2008).
30. Z. Li, L.-Q. Chu, J. V. Sweedler, and P.W. Bohn, "Spatial correlation of confocal Raman scattering and secondary ion mass spectrometric molecular images of lignocellulosic materials," Anal. Chem. 82, 2608-2611 (2010).
31. J. M. Yarbrough, M. E. Himmel, and S.-Y. Ding, "Plant cell wall characterization using scanning probe microscopy techniques," Biotechnol. Biofuels 2, 17 (2009).
32. A. Castellan and R. S. Davidson, "Steady-state and dynamic fluorescence emission from abies wood," J Photoch. Photobio. A 78, 275-279 (1994).
33. U. P. Agarwal and S. A. Ralph, "FT-Raman spectroscopy of wood: identifyin contributions of lignin and carbohydrate polymers in the spectrum of black spruce (Picea mariana)," Appl. Spectrosc. 51, 1648-1655 (1997).