Colorimetric genotyping of single nucleotide polymorphism based on selective aggregation of unmodified gold nanoparticles

Biosensors and Bioelectronics

Volumn 26, Issue 2, 2010, Pages 730-735

  Lee, Hosub ^a   Joo, Sang Woo ^b   Lee, So Yeong ^c   Lee, Chang Ha ^a   Yoon, Kyong Ah ^d   Lee, Kangtaek ^a  

^a Yonsei University   (South Korea)

^b Soongsil University   (South Korea)

^c Seoul National University   (South Korea)

^d National Cancer Center   (South Korea)

Author keywords

Aggregation; Colorimetric sensor; DNA; Genotypes; Gold nanoparticles; Single nucleotide polymorphism

Indexed keywords

AGGREGATION; COLORIMETRIC SENSORS; GENOTYPES; GOLD NANOPARTICLES; SINGLE NUCLEOTIDE POLYMORPHISMS;

COLOR; COLORIMETRY; DNA; GOLD; NANOPARTICLES; OLIGONUCLEOTIDES; POLYMORPHISM; PROBES; SENSORS; SUSPENSIONS (FLUIDS);

GENES;

CYTOSINE; DOUBLE STRANDED DNA; GOLD NANOPARTICLE; SODIUM CHLORIDE; THYMINE;

ARTICLE; BIOSENSOR; COLORIMETRY; CONTROLLED STUDY; DNA SEQUENCE; GENOTYPE; HUMAN; OLIGONUCLEOTIDE PROBE; REACTION OPTIMIZATION; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; SUSPENSION;

BIOSENSING TECHNIQUES; COLORIMETRY; DNA MUTATIONAL ANALYSIS; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; GENOTYPE; GOLD; HUMANS; NANOPARTICLES; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ANALYSIS, DNA;

EID: 77956897980     PISSN: 09565663     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bios.2010.06.050     Document Type: Article

References (31)

1. Ami T., Ozaki G., Yoshimura Y., Fujimoto K. Chem. Lett. 2008, 37:134-135.
2. Bao Y.P., Huber M., Wei T.-F., Marla S.S., Storhoff J.J., Muller U.R. Nucleic Acids Res. 2005, 33. e15/1-e15/7.
3. Braeken D., Reekmans G., Zhou C., Meerbergen B.V., Callewaert G., Borghs G., Bartic C. J. Exp. Nanosci. 2008, 3:157-169.
4. Chen C., Song G., Ren J., Qu X. Chem. Commun. 2008, 46:6149-6151.
5. Chen Y.-T., Hsu C.-L., Hou S.-Y. Anal. Biochem. 2008, 375:299-305.
6. Cho K., Lee Y., Lee C.-H., Lee K., Kim Y., Choi H., Ryu P.-D., Lee S.Y., Joo S.-W. J. Phys. Chem. C 2008, 112:8629-8633.
7. Cargill M., Altshuler D., Ireland J., Sklar P., Ardlie K., Patil N., Lane C.R., Lim E.P., Kalyanaraman N., Nemesh J., Ziaugra L., Friedland L., Rolfe A., Warrington J., Lipshutz R., Daley G.Q., Lander E.S. Nat. Genet. 1999, 22:231-238.
8. Collins F.S., Guyer M.S., Charkravarti A. Science 1997, 278:1580-1581.
9. Dalma-Weiszhausz D.D., Chicurel M.E., Gingeras T.R. Genet. Epidemiol. 2002, 23:4-20.
10. Dahse R., Kosmehl H. Br. J. Cancer 2008, 99:90-92.
11. Ding C., Wang Z., Zhong H., Zhang S. Biosens. Bioelectron. 2010, 25:1082-1087.
12. Doria G., Franco R., Baptista P. IET Nanobiotechnol. 2007, 1:53-57.
13. Elghanian R., Storhoff J.J., Mucic R.C., Letsinger R.L., Mirkin C.A. Science 1997, 277:1078-1081.
14. Frazer K.A., Murray S.S., Schork N.J., Topol E.J. Nat. Rev. Genet. 2009, 10:241-251.
15. Guttmacher A.E., Mcguire A.L., Ponder B., Stefansson K. Nat. Rev. Genet. 2010, 11:161-165.
16. Kim T., Lee K., Gong M., Joo S.-W. Langmuir 2005, 21:9524-9528.
17. Kim T., Hoh M., Lee H., Joo S.-W., Lee S.Y., Lee K. J. Phys. Chem. B 2009, 113:14487-14490.
18. Lee H., Kang T., Yoon K.-A., Lee S.Y., Joo S.-W., Lee K. Biosens. Bioelectron. 2010, 25:1669-1674.
19. Lee P.C., Meisel D. J. Phys. Chem. 1982, 86:3391-3395.
20. Li H., Rothberg L. Proc. Natl. Acad. Sci. U.S.A. 2004, 101:14036-14039.
21. Livak K.J. Genet. Anal. 1999, 14:143-149.
22. Murphy D., O'Brien P., Redmond G. Analyst 2004, 129:970-974.
23. Pharoah P.D., Dunning A.M., Ponder B.A.J., Easton D.F. Nat. Rev. Cancer 2004, 4:850-860.
24. Qin W.J., Yung L.Y.L. Nucleic Acids Res. 2007, 35. e111/1-e111/8.
25. Qin W.J., Yung L.Y.L. Biosens. Bioelectron. 2009, 25:313-319.
26. Sato K., Onoguchi M., Sato Y., Hosokawa K., Maeda M. Anal. Biochem. 2006, 350:162-164.
27. Shen R., Fan J.B., Campbell D., Chang W., Chen J., Doucet D., Yeakley J., Bibikova M., Wickham Garcia E.W., McBride C., Steemers F., Garcia F., Kermani B.G., Gunderson K., Oliphant A. Mutat. Res.-Fund. Mol. Mech. 2005, 573:70-82.
28. Storhoff J.J., Elghanian R., Mucic R.C., Mirkin C.A., Letsinger R.L. J. Am. Chem. Soc. 1998, 120:1959-1964.
29. Tost J., Gut I.G. Mass Spectrom. Rev. 2002, 21:388-418.
30. Tseng C., Wang T., Dong G., Wu S.Y., Young T., Shieh M., Lou P., Lin F. Biomaterials 2007, 28:3996-4005.
31. Xu X., Wang J., Jiao K., Yang X. Biosens. Bioelectron. 2009, 24:3153-3158.