Cloning and characterization of cellulase and xylanase coding genes from anaerobic fungus Neocallimastix sp. GMLF1

International Journal of Agriculture and Biology

Volumn 12, Issue 5, 2010, Pages 691-696

  Comlekcioglu, U ^a   Ozkose, E ^a   Tutus, A ^a   Akyol, I ^a   Ekinci, M S ^a  

^a KAHRAMANMARAS SUTCU IMAM UNIVERSITY   (Turkey)

Author keywords

Cellulase; Cereal; Kraft pulp; Neocallimastix; Xylanase

Indexed keywords

BOS; ESCHERICHIA COLI; EUCALYPTUS; FUNGI; HORDEUM; NEOCALLIMASTIX; TRITICUM AESTIVUM;

EID: 77956867593     PISSN: 15608530     EISSN: 18149596     Source Type: Journal    
DOI: None     Document Type: Article

References (40)

1. Ahmed, S., Q. Ain, N. Aslam, S. Naeem, S. Rahman and A. Jamil, 2003. Induction of xylanase and cellulase genes from Trichoderma harzianum with different carbon sources. Pakistan J. Biol. Sci., 22: 1912-1916
2. Ahmad, Z., M.S. Butt, F.M. Anjum and M. Asgher, 2009. Effect of wheat bran concentration on xylanase biosynthesis by Aspergillus niger. Int. J. Agric. Biol., 11: 571-576
3. Akyol, I., U. Comlekcioglu, B. Kar, M.S. Ekinci and E. Ozkose, 2009. Cloning of a xylanase gene xyn2A from rumen fungus Neocallimastix sp. GMLF2 in E. coli and its partial characterization. Biologia, 64: 664-670
4. Annison, G. and M. Choct, 1991. Anti-nutritive activities of cereal non-starch polysaccharides in broiler diets and strategies minimizing their effects. World's Poult. Sci. J., 47: 232-242
5. Anonymous, 1992. TAPPI Test Methods. Atlanta, USA: TAPPI Press
6. Anthony, T., K.C. Raj, A. Rajendra and P. Gunasekaran, 2003. High molecular weight cellulase-free xylanase from alkali-tolerant Aspergillus fumigatus AR1. Enz. Microbial Technol., 32: 647-654
7. Aygan, A. and B. Arikan, 2009. Production and characterization of multifunctional endoxylanase by Bacillus sp. X13. Turkish J. Biol., 33: 231-237
8. Beg, Q.K., B. Bhushan, M. Kapoor and G.S. Hoondal, 2000. Enhanced production of a thermostable xylanase from Streptomyces sp. QG-11-3 and its application in biobleaching of eucalyptus kraft pulp. Enz. Microbial Technol., 27: 459-466
9. Beguin, P., 1990. Molecular biology of cellulose degradation. Annul. Rev. Microbiol., 44: 219-248
10. Black, G.W., G.P. Hazlewood, G.P. Xue, C.G. Orpin and H.J. Gilbert, 1994. Xylanase B from Neocallimastix patriciarum contains a non-catalytic 455-residue linker sequence comprised of 57 repeats of an octapeptide. Biochem. J., 299: 381-387
11. Carmona, E.C., M.B. Fialho, E.B. Buchgnani, G.D. Coelho, M.R. Brocheto-Braga and J.A. Jorge, 2005. Production, purification and characterization of a minor form of xylanase from Aspergillus versicolor. Proc. Biochem., 40: 359-364
12. Chauhan, S., B. Choudhury, S.N. Singh and P. Ghosh, 2006. Application of xylanase enzyme of Bacillus coagulans as a prebleaching agent on non-woody pulps. Proc. Biochem., 41: 226-231
13. Clarke, J.H., K. Davidson, J.E. Rixon, J.R. Halstead, M.P. Fransen, H.J. Gilbert and G.P. Hazlewood, 2000. A comparison of enzyme-aided bleaching of softwood paper pulp using combinations of xylanase, mannanase and α-galactosidase. Appl. Microbiol. Biotechnol., 53: 661-667
14. Sandrim, V.C., A.C.S. Rizzatti, H.F. Terenzi, J.A.Jorge, A.M.F. Milagres and M.L.T.M. Polizeli, 2005. Purification and biochemical characterization of two xylanases produced by Aspergillus caespitosus and their potential for kraft pulp bleaching. Process Biochem., 40: 1823-1828
15. Denman S., G.P. Xue and B. Patel, 1996. Characterization of a Neocallimastix patriciarum cellulase cDNA (celA) homologous to Trichoderma reesei cellobiohydrolase II. Appl. Environ. Microbiol., 62: 1889-1896
16. Fanutti, C., T. Pony, G. Black, G.P. Hazlewood and H.J. Gilbert, 1995. The conserved non-catalytic 40-residue sequence in cellulases and hemicellulases from anaerobic fungi functions as a protein docking domain. J. Biol. Chem., 270: 29314-29322
17. Fujino, Y., K. Ogata, T. Nagamine and K. Ushida, 1998. Cloning, sequencing and expression of an endoglucanase gene from the rumen anaerobic fungus Neocallimastix frontalis MCH3. Biosci. Biotechnol. Biochem., 62: 1795-1798
18. Genc, H., M. Ozdemir and A. Demirbas, 2001. Analysis of mixed-linked (1-3),(1-4)-β-D-glucans in cereal grains from Turkey. Food Chem., 73: 221-224
19. Gilbert, H.J., G.P. Hazlewood, J.I. Laurie, C.G. Orpin and G.P. Xue, 1992. Homologous catalytic domains in a rumen fungal xylanase: evidence for gene duplication and prokaryotic origin. Mol. Microbiol., 6: 2065-2072
20. Gilbert, H.J. and G.P. Hazlewood, 1993. Bacterial cellulases and xylanases. J. Gen. Microbiol., 139: 187-194
21. Gordon, G.L.R. and M.W. Phillips, 1989. Degradation and utilization of cellulose and straw by three different anaerobic fungi from the ovine nunen. Appl. Environ. Microbiol., 55: 1703-1710
22. Gupta, S., B. Bhushan and G.S. Hoondal, 2000. Isolation, purification and characterization of xylanase from Staphylococcus sp. SG-13 and its application in biobleaching of kraft pulp. J. Appl. Microbiol., 88: 325-334
23. Huang, Y.H., C.T. Huang and R.S. Hseu, 2005. Effects of dockerin domains on Neocallimastix frontalis xylanases. FEMS Microbiol. Lett., 243: 455-460
24. Jobli{dotless}n, K.N., 1981. Isolation, enumeration and maintenance of rumen anaerobic fungi in roll tubes. Appl. Environ. Microbiol., 42: 1119-1122
25. Li, X.L., H. Chen and L.G. Ljungdahl, 1997. Two cellulases, CelA and CelC, from the polycentric anaerobic fungus Orpinomyces strain PC-2 contain N-terminal docking domains for a cellulose-hemicellulase complex. Appl. Environ. Microbiol., 63: 4721-4728
26. Li, X.T., Z.Q. Jiang, L.T. Li, S.Q. Yang, W.Y. Feng, J.Y. Fan and I. Kusakabe, 2005. Characterization of a cellulase-free, neutral xylanase from Thermomyces lanuginosus CBS 288.54 and its biobleaching effect on wheat straw pulp. Biores. Technol., 96: 1370-1379
27. Lowe, S.E., M.K. Theodorou and A.P.J. Trinci, 1987. Cellulases and xylanases of an anaerobic rumen fungus grown on wheat straw, wheat straw holocellulose, cellulose and xylan. Appl. Environ. Microbiol., 53: 1216-1223
28. Mandel, M. and A. Higa, 1970. Calcium-dependent bacteriophage DNA infection. J. Mol. Biol., 53: 159-162
29. Miller, G.L., 1959. Use of dinitrosalicylic acid regent for determination of reducing sugars. Anal. Chem., 31: 426-428
30. Mountfort, D.O. and R.A. Asher, 1985. Production and regulation of cellulose by two strains of the rumen anaerobic fungus Neocallimastix frontalis. Appl. Environ. Microbiol., 49: 1314-1322
31. Mountfort, D.O. and R.A. Asher, 1989. Production of xylanase by the ruminal anaerobic fungus Neocallimastix frontalis. Appl. Environ. Microbiol., 55: 1016-1022
32. Orpin, C.G., 1976. Studies on the rumen flagellate Sphaeromonas communis. J. Gen. Microbiol., 94: 270-280
33. Orpin, C.G., 1994. Anaerobic fungi: taxonomy, biology and distribution in nature. In: Orpin, C.G. and D.O. Mountfort (eds.), The Anaerobic Fungi, pp: 1-47. Marcel Dekker, New York
34. Saleem, M. and M.S. Akhtar, 2002. Biobleaching of kraft pulp by xylanase produced by Bacillus subtilis. Int. J. Agric. Biol., 4: 242-244
35. nd edition. C. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
36. Teather, R.M. and P.J. Wood, 1982. Use of Congo red-polysaccharide interactions in enumeration and characterization of cellulolytic bacteria from the bovine rumen. Appl. Environ. Microbiol., 43: 777-780
37. Thomson, J.A., 1993. Molecular biology of xylan degradation. FEMS Microbiol. Rev., 104: 65-82
38. Wang, Z.R., S.Y. Qiao, W.Q. Lu and D.F. Li, 2005. Effects of enzyme supplementation on performance, nutrient digestibility, gastrointestinal morphology and volatile fatty acid profiles in the hindgut of broilers fed wheat-based diets. Poult. Sci., 84: 875-881
39. Williams, A.G. and C.G. Orpin, 1987. Polysaccharide-degrading enzymes formed by three species of anaerobic rumen fungi on a range of carbonhydrate substrates. Canadian J. Microbiol., 33: 418-426
40. Xue, G.P., K.S. Gobius and C.G. Orpin, 1992. A novel polysaccharide hydrolase cDNA (celD) from Neocallimastix patriciarum encoding three multi-functional catalytic domains with high endoglucanase, cellobiohydrolase and xylanase activities. J. Gen. Microbiol., 138: 2397-2403