An expanded phylogeny of Cuphea (Lythraceae) and a North American monophyly

Plant Systematics and Evolution

Volumn 289, Issue 1-2, 2010, Pages 35-44

  Barber, Janet C ^a   Ghebretinsae, Amanuel ^b   Graham, Shirley A ^c  

^a SAINT LOUIS UNIVERSITY   (United States)

^b MONSANTO COMPANY   (United States)

^c MISSOURI BOTANICAL GARDEN   (United States)

Author keywords

cp rpl16; cp trnL trnF; Cuphea; ITS; Lythraceae; Molecular phylogeny

Indexed keywords

CUPHEA; LYTHRACEAE; PLEUROPHORA;

EID: 77956774840     PISSN: 03782697     EISSN: 16156110     Source Type: Journal    
DOI: 10.1007/s00606-010-0329-7     Document Type: Article

References (34)

1. Barber JC, Hames KA, Cialdella AM, Giussani LM (2009) Phylogenetic relationships of Piptochaetium Presl (Poaceae: Stipeae) and related genera reconstructed from nuclear and chloroplast sequence datasets. Taxon 58: 375-380.
2. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evol 39: 783-791.
3. Graham SA (1988) Revision of Cuphea section Heterodon (Lythraceae). Syst Bot Monogr 20: 1-168.
4. Graham SA (1989a) Cuphea: a new plant source of medium-chain fatty acids. CRC Crit Rev Food Sci Nutr 28: 139-173.
5. Graham SA (1989b) Revision of Cuphea sect. Leptocalyx (Lythraceae). Syst Bot 14: 43-76.
6. Graham SA (1990) New species of Cuphea section Melvilla (Lythraceae) and an annotated key to the section. Brittonia 42: 12-32.
7. Graham SA (1998a) Revision of Cuphea section Diploptychia (Lythraceae). Syst Bot Monogr 53: 1-96.
8. Graham SA (1998b) Relacionamentos entre as espécies autógamas de Cuphea P. Browne seção Brachyandra Koehne (Lythraceae). Acta Bot Bras 12: 203-214.
9. Graham SA (2010) The genus Cuphea (Lythraceae)-diversification on two continents. 60° Congresso Nacional de Botânica, Feira de Santana, BA, Brasil (in press).
10. Graham SA, Cavalcanti TB (2001) New chromosome counts in the Lythraceae and a review of chromosome numbers in the family. Syst Bot 26: 445-458.
11. Graham A, Graham SA (1971) Palynology and systematics of Cuphea. II. Pollen morphology and infrageneric classification. Am J Bot 58: 844-857.
12. Graham A, Nowicke J, Skvarla J, Graham S, Patel G, Lee S (1985) Palynology and systematics of the Lythraceae. I. Genera Adenaria-Ginoria. Am J Bot 72: 1012-1031.
13. Graham SA, Crisci JV, Hoch PC (1993) Cladistic analysis of the Lythraceae sensu lato based on morphological characters. Bot J Linn Soc 113: 1-33.
14. Graham SA, Hall J, Sytsma K, Shi SH (2005) Phylogenetic analysis of the Lythraceae based on four gene regions and morphology. Int J Plant Sci 166: 995-1017.
15. Graham SA, Freudenstein JV, Luker M (2006) A phylogenetic study of Cuphea (Lythraceae) based on morphology and nuclear rDNA ITS sequences. Sys Bot 31: 764-778.
16. Holmgren PK, Holmgren NH (1998 and updates) Index herbariorum: a global directory of public herbaria and associated staff. New York Botanical Garden's Virtual Herbarium. http://sweetgum. nybg. org/ih/. Accessed 20 Nov 2009.
17. Koehne E (1903) Lythraceae. In: Engler A (ed) Das Pflanzenreich IV. 216. Wilhelm Engelmann, Leipzig, pp 1-326.
18. Lourteig A (1986) Revisión de dos secciones del genero Cuphea P. Browne (Lythraceae). Phytologia 60: 17-55.
19. Lourteig A (1987) Lythraceae austroamericanae. Addenda et corrigenda II. Sellowia 39: 5-48.
20. Posada D, Buckley TR (2004) Model selection and model averaging in phylogenetics: advantages of the AIC and Bayesian approaches over likelihood ratio tests. Syst Biol 53: 793-808.
21. Posada D, Crandall KA (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
22. Proctor M, Yeo P, Lack A (1996) The natural history of pollination. Timber Press, Portland, OR, p 479.
23. Rambault A (2007) Se-Al: sequence alignment editor. http://tree. bio. ed. ac. uk/software/seal/. Accessed 20 Nov 2009.
24. Raven PH (1972) Why are bird-visited flowers predominantly red? Evol 26: 674.
25. Ronquist F, Huelsenbeck JP (2003) MrBayes 3: bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
26. Seelanan T, Brubaker CL, Stewart JM, Craven LA, Wendel JF (1999) Molecular systematics of Australian Gossypium section Grandicalyx (Malvaceae). Syst Bot 24: 183-208.
27. Shaw J, Small RL (2004) Addressing the "hardest puzzle in American pomology:" phylogeny of Prunus sect. Prunocerasus (Rosaceae) based on seven noncoding chloroplast DNA regions. Am J Bot 91: 985-996.
28. Shaw J, Lickey EB, Beck JT, Farmer SB, Liu W, Miller J, Siripun KC, Winder CT, Schilling EE, Small RL (2005) The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. Am J Bot 92: 142-166.
29. Soltis DE, Soltis PS, Doyle JJ (1998) Molecular systematics of plants II DNA Sequencing. Kluwer Academic Publishers, Boston, pp 574.
30. Stubbs JM, Slabas AR (1982) Ultrastructural and biochemical characterization of the epidermal hairs of the seeds of Cuphea procumbens. Planta 155: 392-399.
31. Swofford DL (2002) PAUP*: phylogenetic analysis using parsimony, version 4. 0b10. Sinauer Associates, Sunderland, Massachusetts, USA.
32. Taberlet P, Gielly L, Pautou G, Bouvet J (1991) Universal primers for amplification of three non-coding regions of chloroplast DNA. Pl Mol Biol 17: 1105-1109.
33. Weberling F (1988) The architecture of inflorescences in the Myrtales. Ann Missouri Bot Gard 75: 226-310.
34. Zwickl DJ (2006) Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Ph. D. dissertation, The University of Texas at Austin.