EpoDB: An erythropoiesis gene expression database in progress

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 1278, Issue , 1997, Pages 52-61

  Salas, Fidel ^a   Haas, Juergen ^a   Stoeckert, Christian J ^b   Overton, G Christian ^a  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

^b CHILDREN S HOSPITAL OF PHILADELPHIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; COMPUTER SOFTWARE; EXPERT SYSTEMS; HEMOGLOBIN; INTELLIGENT DATABASES; QUERY LANGUAGES;

DATABASE QUERIES; DIRECT EXPORTS; GENBANK; GENE EXPRESSION LEVELS; JAVA APPLETS;

TRANSCRIPTION;

EID: 77956656362     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/bfb0033203     Document Type: Conference Paper

References (19)

1. M. Scłiena and D. Schałon and R. W. Davies and P.O. Brown, Quantitative monitoring of gene expression patterns with a complementary DNA microarray, Science, (1995) 270: 467-470
2. G. C. Overton, J. Aaronson, J. Haas, and J. Adams. QGB: A system for querying sequence database fields and features. Journal of Computational Biology, 1(1):3-13, 1994.
3. Implementation by Jonathan Schug, Computational Biology and Informatics Laboratory, University of Pennsylvania
4. S. Dong and D.B. Searls, Gene Structure Predictions by Linguistic Methods, Genomics (1994) 23: 540-551
5. CBIL bioWidgets for Java. Prototype implementation by Shan Dong, http://agave.humgen.upenn.edu/bioWidgetsJava/, 1996. Computational Biology and Informatics Laboratory, University of Pennsylvania.
6. TESS Home Page, http://agave.hnmgen.upenn.edti/tess/index.htinl, 1996. Computational Biology and Informatics Laboratory, University of Pennsylvania.
7. The Siberian Regional Center for Geneinformatics. In development, 1996.
8. The Siberian Regional Center for Geneinformatics. TRRD. http://benpc.bionet.nsc.ru/TRRD/index.html, 1996.
9. V. B. Velculescu, L. Zhang, B. Vogelstein, and K. W. Kinzler, Serial analysis of gene expression, Science (1995) 270: 484-487
10. D.B. Searls. bioTk: componentry for genome informatics graphical user interfaces. Gene, 163(2):GC1-16, 1995. (appeared electronically in Gene-COMBIS).
11. Jeffery Aaronson, Juergen Haas, and G. Christian Overton. Knowledge discovery in GenBank. In Proceedings of the First International Conference on Intelligent Systems for Molecular Biology, pages 3-11, Menlo Park, CA, 1993. AAAI Press.
12. V. Hartenstein, A. lee and A. W. Toga. A graphical digital database of Drosophila embryogenesis. Trends in Genetics (1995) 11: 51-58
13. EPD. Euearyotie Promoter Database. http://bioslave, mio, no:800i/srs /srsc?-id+815095061_159.14.33.17+-inf o+EPD.
14. GXD Group. GXD Home Page. http://www.informatics.jax.org/gxd.html. The Jackson Laboratory.
15. Globin Gene Server home page. http://gloMn.cse.psu.edu/.
16. PIR-The Protein Identification Resource. http://www.gdb.org/Dan/proteins /pir.html
17. SWISSPROT. http://expasy.hcuge.ch/sprot/sprot-top.html
18. GenBank Database Query Form, http://www2.ncbi.nlm.nih.gov/genbank /query-form, html
19. TRANSFAC-the database. http://transfac.gbf-braunschweig.de/TRANSFAC /browse/index.htnu