Probing the mechanism of cellulosome attachment to the Clostridium thermocellum cell surface: Computer simulation of the Type II cohesin-dockerin complex and its variants

Protein Engineering, Design and Selection

Volumn 23, Issue 10, 2010, Pages 759-768

  Xu, Jiancong ^a,b,c,d   Smith, Jeremy C ^a,b  

^a OAK RIDGE NATIONAL LABORATORY   (United States)

^b UNIVERSITY OF TENNESSEE   (United States)

^c BioEnergy Science Center   (United States)

^d UNIVERSITY OF WASHINGTON   (United States)

Author keywords

cellulosome; cohesin dockerin; free energy perturbation; molecular dynamics

Indexed keywords

AMINO ACID RESIDUES; ANAEROBIC BACTERIUM; AQUEOUS SOLUTIONS; BACTERIAL CELLS; BINDING AFFINITIES; C-TERMINUS; CELL ENVELOPES; CELL SURFACES; CELLULOSOMES; CLOSTRIDIUM THERMOCELLUM; COHESINS; CROSS-CORRELATION ANALYSIS; ESSENTIAL DYNAMICS; FREE ENERGY PERTURBATION; FREE-ENERGY CALCULATIONS; HOT SPOT; HYDROPHOBIC RESIDUES; LIGNOCELLULOSIC BIOMASS; MODE OF BINDING; MOLECULAR DYNAMICS SIMULATIONS; MULTICOMPONENTS; PROTEIN INTERFACES; PROTEIN-PROTEIN INTERACTIONS; SCAFFOLDING PROTEINS; SPECIFIC CONTACT; TYPE II; WILD TYPES;

AMINO ACIDS; BINDING ENERGY; CELL MEMBRANES; CELLULOSIC ETHANOL; CLOSTRIDIUM; COMPUTER SIMULATION; DYNAMICS; ETHANOL; FREE ENERGY; ORGANIC ACIDS; SOLUTIONS;

MOLECULAR DYNAMICS;

BACTERIAL PROTEIN; CELLULOSOME; COHESIN; DOCKERIN; LIGNOCELLULOSE; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL CELL; BIOMASS; CLOSTRIDIUM THERMOCELLUM; COMPUTER SIMULATION; CRYSTAL STRUCTURE; MOLECULAR DYNAMICS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BINDING SITES; CELL CYCLE PROTEINS; CELL MEMBRANE; CELLULOSOMES; CHROMOSOMAL PROTEINS, NON-HISTONE; CLOSTRIDIUM THERMOCELLUM; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; MOLECULAR DYNAMICS SIMULATION; MOLECULAR SEQUENCE DATA; MUTATION; PROTEIN ISOFORMS;

BACTERIA (MICROORGANISMS); CLOSTRIDIUM THERMOCELLUM;

EID: 77956609653     PISSN: 17410126     EISSN: 17410134     Source Type: Journal    
DOI: 10.1093/protein/gzq049     Document Type: Article

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