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Volumn 25, Issue 8, 2010, Pages 1152-1159

Identification of novel methylation markers in hepatocellular carcinoma using a methylation array

Author keywords

Bead array; Carcinoma; CpG Islands; DNA methylation; Hepatocellular

Indexed keywords

5 AZA 2' DEOXYCYTIDINE; ANTINEOPLASTIC ANTIMETABOLITE; AZACITIDINE; DRUG DERIVATIVE; GLYCOSYLPHOSPHATIDYLINOSITOL ANCHORED PROTEIN; HOMEODOMAIN PROTEIN; INTERFERON REGULATORY FACTOR; IRF5 PROTEIN, HUMAN; NEUROPEPTIDE Y; TNFRSF10C PROTEIN, HUMAN; TRANSCRIPTION FACTOR HOXA9; TUMOR NECROSIS FACTOR DECOY RECEPTOR;

EID: 77956607702     PISSN: 10118934     EISSN: 15986357     Source Type: Journal    
DOI: 10.3346/jkms.2010.25.8.1152     Document Type: Article
Times cited : (44)

References (30)
  • 1
    • 31944432339 scopus 로고    scopus 로고
    • A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters
    • Saxonov S, Berg P, Brutlag DL. A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters. Proc Natl Acad Sci USA 2006; 103: 1412-7.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 1412-1417
    • Saxonov, S.1    Berg, P.2    Brutlag, D.L.3
  • 2
    • 34047116826 scopus 로고    scopus 로고
    • Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
    • Weber M, Hellmann I, Stadler MB, Ramos L, Paabo S, Rebhan M, Schübeler D. Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat Genet 2007; 39: 457-66.
    • (2007) Nat Genet , vol.39 , pp. 457-466
    • Weber, M.1    Hellmann, I.2    Stadler, M.B.3    Ramos, L.4    Paabo, S.5    Rebhan, M.6    Schübeler, D.7
  • 3
    • 0027378582 scopus 로고
    • Role for DNA methylation in genomic imprinting
    • Li E, Beard C, Jaenisch R. Role for DNA methylation in genomic imprinting. Nature 1993; 366: 362-5.
    • (1993) Nature , vol.366 , pp. 362-365
    • Li, E.1    Beard, C.2    Jaenisch, R.3
  • 4
    • 0032076048 scopus 로고    scopus 로고
    • RNA and the epigenetic regulation of X chromosome inactivation
    • Panning B, Jaenisch R. RNA and the epigenetic regulation of X chromosome inactivation. Cell 1998; 93: 305-8.
    • (1998) Cell , vol.93 , pp. 305-308
    • Panning, B.1    Jaenisch, R.2
  • 5
    • 34547792388 scopus 로고    scopus 로고
    • Epigenetic gene silencing in cancer: the DNA hypermethylome
    • 16 Spec No 1
    • Esteller M. Epigenetic gene silencing in cancer: the DNA hypermethylome. Hum Mol Genet 2007; 16 Spec No 1: R50-9.
    • (2007) Hum Mol Genet
    • Esteller, M.1
  • 6
    • 33746468951 scopus 로고    scopus 로고
    • Aberrant gene silencing in tumor progression: implications for control of cancer
    • Baylin SB, Chen WY. Aberrant gene silencing in tumor progression: implications for control of cancer. Cold Spring Harb Symp Quant Biol 2005; 70: 427-33.
    • (2005) Cold Spring Harb Symp Quant Biol , vol.70 , pp. 427-433
    • Baylin, S.B.1    Chen, W.Y.2
  • 7
    • 7944230161 scopus 로고    scopus 로고
    • Epigenetic silencing mediated by CpG island methylation: potential as a therapeutic target and as a biomarker
    • Teodoridis JM, Strathdee G, Brown R. Epigenetic silencing mediated by CpG island methylation: potential as a therapeutic target and as a biomarker. Drug Resist Updat 2004; 7: 267-78.
    • (2004) Drug Resist Updat , vol.7 , pp. 267-278
    • Teodoridis, J.M.1    Strathdee, G.2    Brown, R.3
  • 9
    • 41849111637 scopus 로고    scopus 로고
    • DNA methylation in hepatocellular carcinoma
    • Tischoff I, Tannapfe A. DNA methylation in hepatocellular carcinoma. World J Gastroenterol 2008; 14: 1741-8.
    • (2008) World J Gastroenterol , vol.14 , pp. 1741-1748
    • Tischoff, I.1    Tannapfe, A.2
  • 13
    • 33846639662 scopus 로고    scopus 로고
    • Hypermethylation of CpG island loci and hypomethylation of LINE-1 and Alu repeats in prostate adenocarcinoma and their relationship to clinicopathological features
    • Cho NY, Kim BH, Choi M, Yoo EJ, Moon KC, Cho YM, Kim D, Kang GH. Hypermethylation of CpG island loci and hypomethylation of LINE-1 and Alu repeats in prostate adenocarcinoma and their relationship to clinicopathological features. J Pathol 2007; 211: 269-77.
    • (2007) J Pathol , vol.211 , pp. 269-277
    • Cho, N.Y.1    Kim, B.H.2    Choi, M.3    Yoo, E.J.4    Moon, K.C.5    Cho, Y.M.6    Kim, D.7    Kang, G.H.8
  • 14
    • 0037068379 scopus 로고    scopus 로고
    • 5-Azacytidine and 5-aza-2'-deoxycytidine as inhibitors of DNA methylation: Mechanistic studies and their implications for cancer therapy
    • Christman JK. 5-Azacytidine and 5-aza-2'-deoxycytidine as inhibitors of DNA methylation: Mechanistic studies and their implications for cancer therapy. Oncogene 2002; 21: 5483-95.
    • (2002) Oncogene , vol.21 , pp. 5483-5495
    • Christman, J.K.1
  • 15
    • 0022032204 scopus 로고
    • Altering gene expression with 5-azacytidine
    • Jones PA. Altering gene expression with 5-azacytidine. Cell 1985; 40: 485-6.
    • (1985) Cell , vol.40 , pp. 485-486
    • Jones, P.A.1
  • 16
    • 33747773708 scopus 로고    scopus 로고
    • Histone H3 acetylation and H3 K4 methylation define distinct chromatin regions permissive for transgene expression
    • Yan C, Boyd DD. Histone H3 acetylation and H3 K4 methylation define distinct chromatin regions permissive for transgene expression. Mol Cell Biol 2006; 26: 6357-71.
    • (2006) Mol Cell Biol , vol.26 , pp. 6357-6371
    • Yan, C.1    Boyd, D.D.2
  • 17
    • 2342475666 scopus 로고    scopus 로고
    • Polycomb complexes and silencing mechanisms
    • Lund AH, van Lohuizen M. Polycomb complexes and silencing mechanisms. Curr Opin Cell Biol 2004; 16: 239-46.
    • (2004) Curr Opin Cell Biol , vol.16 , pp. 239-246
    • Lund, A.H.1    van Lohuizen, M.2
  • 20
    • 34248361968 scopus 로고    scopus 로고
    • Homeobox gene methylation in lung cancer studied by genome-wide analysis with a microarray-based methylated CpG island recovery assay
    • Rauch T, Wang Z, Zhang X, Zhong X, Wu X, Lau SK, Kernstine KH, Riggs AD, Pfeifer GP. Homeobox gene methylation in lung cancer studied by genome-wide analysis with a microarray-based methylated CpG island recovery assay. Proc Natl Acad Sci USA 2007; 104: 5527-32.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 5527-5532
    • Rauch, T.1    Wang, Z.2    Zhang, X.3    Zhong, X.4    Wu, X.5    Lau, S.K.6    Kernstine, K.H.7    Riggs, A.D.8    Pfeifer, G.P.9
  • 21
    • 34548535326 scopus 로고    scopus 로고
    • DNA methylation profiling of ovarian carcinomas and their in vitro models identifies HOXA9, HOXB5, SCGB3A1, and CRABP1 as novel targets
    • Wu Q, Lothe RA, Ahlquist T, Silins I, Trope CG, Micci F, Nesland JM, Suo Z, Lind GE. DNA methylation profiling of ovarian carcinomas and their in vitro models identifies HOXA9, HOXB5, SCGB3A1, and CRABP1 as novel targets. Mol Cancer 2007; 6: 45.
    • (2007) Mol Cancer , vol.6 , pp. 45
    • Wu, Q.1    Lothe, R.A.2    Ahlquist, T.3    Silins, I.4    Trope, C.G.5    Micci, F.6    Nesland, J.M.7    Suo, Z.8    Lind, G.E.9
  • 22
    • 0033600845 scopus 로고    scopus 로고
    • Y receptor-mediated induction of CD63 transcripts, a tetraspanin determined to be necessary for differentiation of the intestinal epithelial cell line, hBRIE 380i cells
    • Hallden G, Hadi M, Hong HT, Aponte GW. Y receptor-mediated induction of CD63 transcripts, a tetraspanin determined to be necessary for differentiation of the intestinal epithelial cell line, hBRIE 380i cells. J Biol Chem 1999; 274: 27914-24.
    • (1999) J Biol Chem , vol.274 , pp. 27914-27924
    • Hallden, G.1    Hadi, M.2    Hong, H.T.3    Aponte, G.W.4
  • 23
    • 0022972956 scopus 로고
    • Characterization, sequence, and expression of the cloned human neuropeptide Y gene
    • Minth CD, Andrews PC, Dixon JE. Characterization, sequence, and expression of the cloned human neuropeptide Y gene. J Biol Chem 1986; 261: 11974-9.
    • (1986) J Biol Chem , vol.261 , pp. 11974-11979
    • Minth, C.D.1    Andrews, P.C.2    Dixon, J.E.3
  • 25
    • 46249114389 scopus 로고    scopus 로고
    • Identification of genes targeted by CpG island methylator phenotype in neuroblastomas, and their possible integrative involvement in poor prognosis
    • Abe M, Watanabe N, McDonell N, Takato T, Ohira M, Nakagawara A, Ushijima T. Identification of genes targeted by CpG island methylator phenotype in neuroblastomas, and their possible integrative involvement in poor prognosis. Oncology 2008; 74: 50-60.
    • (2008) Oncology , vol.74 , pp. 50-60
    • Abe, M.1    Watanabe, N.2    McDonell, N.3    Takato, T.4    Ohira, M.5    Nakagawara, A.6    Ushijima, T.7
  • 28
    • 34447098370 scopus 로고    scopus 로고
    • A chromatin landmark and transcription initiation at most promoters in human cells
    • Guenther MG, Levine SS, Boyer LA, Jaenisch R, Young RA. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 2007; 130: 77-88.
    • (2007) Cell , vol.130 , pp. 77-88
    • Guenther, M.G.1    Levine, S.S.2    Boyer, L.A.3    Jaenisch, R.4    Young, R.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.