메뉴 건너뛰기




Volumn 26, Issue 18, 2010, Pages 2281-2288

Multiple gene expression profile alignment for microarray time-series data clustering

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; CLUSTER ANALYSIS; DNA MICROARRAY; GENE EXPRESSION; GENE EXPRESSION PROFILING; METHODOLOGY;

EID: 77956516272     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq422     Document Type: Article
Times cited : (18)

References (21)
  • 1
    • 0041346457 scopus 로고    scopus 로고
    • Continuous representations of time series gene expression data
    • Bar-Joseph,Z. et al. (2003) Continuous representations of time series gene expression data. J. Comput. Biol., 10, 341-356.
    • (2003) J. Comput. Biol. , vol.10 , pp. 341-356
    • Bar-Joseph, Z.1
  • 2
    • 33646187587 scopus 로고    scopus 로고
    • Clustering gene expression series with prior knowledge
    • Bréhélin,L. (2005) Clustering gene expression series with prior knowledge. Lect. Notes Comput. Sci., 3692, 27-38.
    • (2005) Lect. Notes Comput. Sci. , vol.3692 , pp. 27-38
    • Bréhélin, L.1
  • 3
    • 0032112293 scopus 로고    scopus 로고
    • A genome-wide transactional analysis of the mitotic cell cycle
    • Cho,R. et al. (1998) A genome-wide transactional analysis of the mitotic cell cycle. Mol. Cell, 2, 65-73.
    • (1998) Mol. Cell , vol.2 , pp. 65-73
    • Cho, R.1
  • 4
    • 0032561246 scopus 로고    scopus 로고
    • The transcriptional program of sporulation in budding yeast
    • Chu,S. et al. (1998) The transcriptional program of sporulation in budding yeast. Science, 282, 699-705.
    • (1998) Science , vol.282 , pp. 699-705
    • Chu, S.1
  • 5
    • 34547160731 scopus 로고    scopus 로고
    • Clustering time-series gene expression data using smoothing spline derivatives
    • 70561
    • Déjean,S. et al. (2007) Clustering time-series gene expression data using smoothing spline derivatives. EURASIP J. Bioinform. Syst. Biol., 70561, 705-761.
    • (2007) EURASIP J. Bioinform. Syst. Biol. , pp. 705-761
    • Déjean, S.1
  • 6
    • 0002629270 scopus 로고
    • Maximum likelihood from incomplete data via the em algorithm
    • Dempster,A. et al. (1977) Maximum likelihood from incomplete data via the em algorithm. J. R. Stat. Soc., 39, 1-38.
    • (1977) J. R. Stat. Soc. , vol.39 , pp. 1-38
    • Dempster, A.1
  • 7
    • 28644452470 scopus 로고    scopus 로고
    • Clustering short time series gene expression data
    • Ernst,J. et al. (2005) Clustering short time series gene expression data. Bioinformatics, 21 (Suppl. 1), i159-i168.
    • (2005) Bioinformatics , vol.21 , Issue.SUPPL. 1
    • Ernst, J.1
  • 8
    • 0032729435 scopus 로고    scopus 로고
    • Exploring expression data: identication and analysis of coexpressed genes
    • Heyer,L. et al. (1999) Exploring expression data: identication and analysis of coexpressed genes. Genome Res., 9, 1106-1115.
    • (1999) Genome Res. , vol.9 , pp. 1106-1115
    • Heyer, L.1
  • 9
    • 13144282754 scopus 로고    scopus 로고
    • The hungarian method for the assignment problem
    • Kuhn,H. (2005) The hungarian method for the assignment problem. Nav. Res. Logist., 52, 7-21.
    • (2005) Nav. Res. Logist. , vol.52 , pp. 7-21
    • Kuhn, H.1
  • 10
    • 15344348728 scopus 로고    scopus 로고
    • Clustering of unevenly sampled gene expression time-series data
    • Moller-Levet,C. et al. (2005) Clustering of unevenly sampled gene expression time-series data. Fuzzy sets Syst., 152, 49-66.
    • (2005) Fuzzy sets Syst. , vol.152 , pp. 49-66
    • Moller-Levet, C.1
  • 11
    • 0037620663 scopus 로고    scopus 로고
    • Gene selection and clustering for time-course and dose-response microarray experiments using order-restricted inference
    • Peddada,S. et al. (2005) Gene selection and clustering for time-course and dose-response microarray experiments using order-restricted inference. Bioinformatics, 19, 834-841.
    • (2005) Bioinformatics , vol.19 , pp. 834-841
    • Peddada, S.1
  • 12
    • 20044366888 scopus 로고    scopus 로고
    • Identication of cell cycle-regulated genes in ssion yeast
    • Peng,X. et al. (2005) Identication of cell cycle-regulated genes in ssion yeast. Mol. Biol. Cell, 16, 1026-1042.
    • (2005) Mol. Biol. Cell , vol.16 , pp. 1026-1042
    • Peng, X.1
  • 13
    • 0037047161 scopus 로고    scopus 로고
    • Cluster analysis of gene expression dynamics
    • Ramoni,M. et al. (2002) Cluster analysis of gene expression dynamics. Proc. Natl Acad. Sci. USA, 99, 9121-9126.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 9121-9126
    • Ramoni, M.1
  • 15
    • 59149100683 scopus 로고    scopus 로고
    • Clustering time-series gene expression data with unequal time intervals
    • Rueda,L. et al. (2008) Clustering time-series gene expression data with unequal time intervals. Springer Trans. Comput. Syst. Biol. X, LNBI, 5410, 100-123.
    • (2008) Springer Trans. Comput. Syst. Biol. X, LNBI , vol.5410 , pp. 100-123
    • Rueda, L.1
  • 17
    • 77956546692 scopus 로고    scopus 로고
    • Interpreting patterns of gene expression with soms: methods and application to hematopoietic differentiation
    • Tamayo,P. et al. (1999) Interpreting patterns of gene expression with soms: methods and application to hematopoietic differentiation. Proc. Natl Acad. Sci. USA, 96, 9121-9126.
    • (1999) Proc. Natl Acad. Sci. USA , vol.96 , pp. 9121-9126
    • Tamayo, P.1
  • 18
    • 0033028596 scopus 로고    scopus 로고
    • Systematic determination of genetic network architecture
    • Tavazoie,S. et al. (1999) Systematic determination of genetic network architecture. Nat. Genet., 22, 281-285.
    • (1999) Nat. Genet. , vol.22 , pp. 281-285
    • Tavazoie, S.1
  • 19
    • 33746583655 scopus 로고    scopus 로고
    • Clustering of pseudomonas aeruginosa transcriptomes from planktonic cultures, developing and mature biolms reveals distinct expression proles
    • Waite,R. et al. (2006) Clustering of pseudomonas aeruginosa transcriptomes from planktonic cultures, developing and mature biolms reveals distinct expression proles. BMC Genomics, 7, 162-175.
    • (2006) BMC Genomics , vol.7 , pp. 162-175
    • Waite, R.1
  • 20
    • 67949110882 scopus 로고    scopus 로고
    • Wiley-IEEE Press, New Jersey
    • Xu,R. and Wunsch,D. (2008) Clustering. Wiley-IEEE Press, New Jersey.
    • (2008) Clustering
    • Xu, R.1    Wunsch, D.2
  • 21
    • 38949142282 scopus 로고    scopus 로고
    • Novel algorithm for coexpression detection in time-varying microarray data sets
    • Zong-Xian,Y. and Jung-Hsien,C. (2008) Novel algorithm for coexpression detection in time-varying microarray data sets. IEEE/ACM Trans. Comput. Biol. Bioinform., 5, 120-135.
    • (2008) IEEE/ACM Trans. Comput. Biol. Bioinform. , vol.5 , pp. 120-135
    • Zong-Xian, Y.1    Jung-Hsien, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.