Complete genome sequence of the diesel-degrading Acinetobacter sp. strain DR1

Journal of Bacteriology

Volumn 192, Issue 18, 2010, Pages 4794-4795

  Jung, Jaejoon ^a   Baek, Jeong Hun ^b   Park, Woojun ^a  

^a Korea University   (South Korea)

^b Macrogen Inc   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

HEXADECANE; GASOLINE;

ACINETOBACTER; BACTERIAL GENETICS; BACTERIAL STRAIN; BACTERIUM ISOLATION; BIOFILM; BIOREMEDIATION; DEGRADATION; DIESEL ENGINE; GENE SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; OPERON; PRIORITY JOURNAL; SHORT SURVEY; ARTICLE; BACTERIAL GENOME; GENETICS; METABOLISM; MOLECULAR GENETICS; POLLUTANT;

ACINETOBACTER; ACINETOBACTER BAUMANNII; ACINETOBACTER SP.;

ACINETOBACTER; ENVIRONMENTAL POLLUTANTS; GASOLINE; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA;

EID: 77956505983     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00722-10     Document Type: Short Survey

References (9)

1. Aziz, R. K., D. Bartels, A. A. Best, M. DeJongh, T. Disz, R. A. Edwards, K. Formsma, S. Gerdes, E. M. Glass, M. Kubal, F. Meyer, G. J. Olsen, R. Olson, A. L. Osterman, R. A. Overbeek, L. K. McNeil, D. Paarmann, T. Paczian, B. Parrello, G. D. Pusch, C. Reich, R. Stevens, O. Vassieva, V. Vonstein, A. Wilke, and O. Zagnitko. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.
2. Barbe, V., D. Vallenet, N. Fonknechten, A. Kreimeyer, S. Oztas, L. Labarre, S. Cruveiller, C. Robert, S. Duprat, P. Wincker, L. N. Ornston, J. Weissenbach, P. Marliere, G. N. Cohen, and C. Medigue. 2004. Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium. Nucleic Acids Res. 32:5766-5779.
3. Delcher, A. L., K. A. Bratke, E. C. Powers, and S. L. Salzberg. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
4. Kang, Y.-S., and W. Park. 2010. Protection against diesel oil toxicity by sodium chloride-induced exopolysaccharides in Acinetobacter sp. strain DR1. J. Biosci. Bioeng. 109:118-123.
5. Kang, Y.-S., and W. Park. 2010. Trade-off between antibiotic resistance and biological fitness in Acinetobacter sp. strain DR1. Environ. Microbiol. 12:1304-1318.
6. Kang, Y.-S., and W. Park. 2010. Contribution of quorum sensing system to hexadecane degradation and biofilm formation in Acinetobacter sp. strain DR1. J. Appl. Microbiol. doi:10.1111/j.1365-2672.2010.04793.x.
7. Lagesen, K., P. Hallin, E. A. Rodland, H. H. Staerfeldt, T. Rognes, and D. W. Ussery. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
8. Lowe, T. M., and S. R. Eddy. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
9. Young, D. M., D. Parke, and L. N. Ornston. 2005. Opportunities for genetic investigation afforded by Acinetobacter baylyi, a nutritionally versatile bacterial species that is highly competent for natural transformation. Annu. Rev. Microbiol. 59:519-551.