Survey of the year 2008: Applications of isothermal titration calorimetry

Journal of Molecular Recognition

Volumn 23, Issue 5, 2010, Pages 395-413

  Falconer, Robert J ^a   Penkova, Anita ^b,c   Jelesarov, Ilian ^b   Collins, Brett M ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b UNIVERSITY OF ZURICH   (Switzerland)

^c University of Southern California ^*  (United States)

Author keywords

Calorimetry; Enthalpy; Entropy; Free energy; Heat capacity; Interactions; ITC; Protonation; Thermodynamics

Indexed keywords

LIPID; NUCLEIC ACID; PROTEIN;

CALORIMETRY; CHEMISTRY; DRUG DESIGN; HISTORY; METABOLISM; METHODOLOGY; PROTEIN CONFORMATION; PROTEIN MULTIMERIZATION; REVIEW; TEMPERATURE; THERMODYNAMICS;

CALORIMETRY; DRUG DESIGN; HISTORY, 21ST CENTURY; LIPIDS; NUCLEIC ACIDS; PROTEIN CONFORMATION; PROTEIN MULTIMERIZATION; PROTEINS; TEMPERATURE; THERMODYNAMICS;

EID: 77956404669     PISSN: 09523499     EISSN: 10991352     Source Type: Journal    
DOI: 10.1002/jmr.1025     Document Type: Review

References (541)

1. Charbonnier S, Gallego O, Gavin A-C, El-Gewely MR. 2008. The social network of a cell: recent advances in interactome mapping. Biotechnology Annual Review. Elsevier: Maryland Heights; 1-28.
2. Cooper A. 1998. Microcalorimetry of protein-protein interactions. Methods Mol. Biol. 88: 11-22.
3. Indyk L, Fisher HF. 1998. Theoretical aspects of isothermal titration calorimetry. Methods Enzymol. 295: 350-364.
4. Jelesarov I, Bosshard HR. 1999. Isothermal titration calorimetry and differential scanning calorimetry as complementary tools to investigate the energetics of biomolecular recognition. J. Mol. Recognit. 12: 3-18.
5. Pierce MM, Raman CS, Nall BT. 1999. Isothermal titration calorimetry of protein-protein interactions. Methods 19: 213-221.
6. Perozzo R, Folkers G, Scapozza L. 2004. Thermodynamics of proteinligand interactions: history, presence, and future aspects. J. Recept. Signal Transduct. Res. 24: 1-52.
7. Velazquez-Campoy A, Ohtaka H, Nezami A, Muzammil S, Freire E. 2004. Isothermal titration calorimetry. Current Protocols in Cell Biology. Wiley Interscience: Somerset, USA.
8. Ladbury JE. 2004. Application of isothermal titration calorimetry in the biological sciences: things are heating up! Biotechniques 37: 885-887.
9. Freyer MW, Lewis EA. 2008. Isothermal titration calorimetry: experimental design, data analysis, and probing macromolecule/ligand binding and kinetic interactions. Methods Cell. Biol. 84: 79-113.
10. Todd MJ, Gomez J. 2001. Enzyme kinetics determined using calorimetry: a general assay for enzyme activity? Anal. Biochem. 296: 179-187.
11. Bianconi ML. 2007. Calorimetry of enzyme-catalyzed reactions. Biophys. Chem. 126: 59-64.
12. Egawa T, Tsuneshige A, Suematsu M, Yonetani T. 2007. Method for determination of association and dissociation rate constants of reversible bimolecular reactions by isothermal titration calorimeters. Anal. Chem. 79: 2972-2978.
13. Tellinghuisen J. 2008. Isothermal titration calorimetry at very low c. Anal. Biochem. 373: 395-397.
14. Henzler K, Haupt B, Ballauff M. 2008. Enzymatic activity of immobilized enzyme determined by isothermal titration calorimetry. Anal. Biochem. 378: 184-189.
15. Todorova NA, Schwarz FP. 2008. Effect of the phosphate substrate on drug-inhibitor binding to human purine nucleoside phosphorylase. Arch. Biochem. Biophys. 480: 122-131.
16. Quesada-Soriano I, Leal I, Casas-Solvas JM, Vargas-Berenguel A, Barón C, Ruiz-Pé rez LM, González-Pacanowska D, Garcia-Fuentes L. 2008. Kinetic and thermodynamic characterization of dUTP hydrolysis by Plasmodium falciparum dUTPase. Biochim. Biophys. Acta 1784: 1347-1355.
17. Stoddard CD, Gilbert SD, Batey RT. 2008. Ligand-dependent folding of the three-way junction in the purine riboswitch. RNA 14: 675-684.
18. Barranco-Medina S, Kakorin S, Lazaro JJ, Dietz KJ. 2008. Thermodynamics of the dimer-decamer transition of reduced human and plant 2-Cys peroxiredoxin. Biochemistry 47: 7196-7204.
19. Bello M, Perez-Hernandez G, Fernandez-Velasco DA, Arreguin-Espinosa R, Garcia-Hernandez E. 2008. Energetics of protein homodimerization: effects of water sequestering on the formation of beta-lactoglobulin dimer. Proteins: Struct. Funct. Bioinf. 70: 1475-1487.
20. Reyes-Turcu FE, Shanks JR, Komander D, Wilkinson KD. 2008. Recognition of polyubiquitin isoforms by the multiple ubiquitin binding modules of isopeptidase T. J. Biol. Chem. 283: 19581-19592.
21. Reshetnyak YK, Andreev OA, Segala M, Markin VS, Engelman DM. 2008. Energetics of peptide (pHLIP) binding to and folding across a lipid bilayer membrane. Proc. Natl Acad. Sci. U. S. A. 105: 15340-15345.
22. Alegre-Cebollada J, Cunietti M, Herrero-Galan E, Gavilanes JG, Martinez-del-Pozo A. 2008. Calorimetric scrutiny of lipid binding by sticholysin II toxin mutants. J. Mol. Biol. 382: 920-930.
23. Andrushchenko VV, Aarabi MH, Nguyen LT, Prenner EJ, Vogel HJ. 2008. Thermodynamics of the interactions of tryptophan-rich cathelicidin antimicrobial peptides with model and natural membranes. Biochim. Biophys. Acta Biomembr. 1778: 1004-1014.
24. Verly RM, Rodrigues MA, Daghastanli KRP, Denadai AML, Cuccovia IM, Bloch C Jr, Frézard F, Santoro MM, Piló-Veloso D, Bemquerer MP. 2008. Effect of cholesterol on the interaction of the amphibian antimicrobial peptide DD K with liposomes. Peptides 29: 15-24.
25. Zhou Y, Larson JD, Bottoms CA, Arturo EC, Henzl MT, Jenkins JL, Nix JC, Becker DF, Tanner JJ. 2008. Structural basis of the transcriptional regulation of the proline utilization regulon by multifunctional PutA. J. Mol. Biol. 381: 174-188.
26. Liu T, Lin Y, Wen X, Jorissen RN, Gilson MK. 2007. BindingDB: a web-accessible database of experimentally determined proteinligand binding affinities. Nucleic Acids Res. 35: D198-D201.
27. McKew JC, Lee KL, Shen MWH, Thakker P, Foley MA, Behnke ML, Hu B, Sum FW, Tam S, Hu Y, Chen L, Kirincich SJ, Michalak R, Thomason J, Ipek M, Wu K, Wooder L, Ramarao MK, Murphy EA, Goodwin DG, Albert L, Xu X, Donahue F, Ku MS, Keith J, Nickerson-Nutler CL, Abraham WM, Williams C, Hegen M, Clark JD. 2008. Indole cytosolic phospholipase A(2) alpha inhibitors: discovery and in vitro and in vivo characterization of 4-{3-[5-chloro-2-(2-{[(3,4-dichlorobenzyl)sulfonyl]-amino}ethyl)-1-(diphe nylmethyl)-1H-indol-3-yl]propyl}benzoic acid, efipladib. J. Med. Chem. 51: 3388-3413.
28. Freire E. 2008. Do enthalpy and entropy distinguish first in class from best in class? Drug Discov. Today 13: 869-874.
29. Olsson TSG, Williams MA, Pitt WR, Ladbury JE. 2008. The thermodynamics of protein-ligand interaction and solvation: insights for ligand design. J. Mol. Biol. 384: 1002-1017.
30. Li LW, Dantzer JJ, Nowacki J, O'Callaghan BJ, Meroueh SO. 2008. PDBcal: a comprehensive dataset for receptor-ligand interactions with three-dimensional structures and binding thermodynamics from isothermal titration calorimetry. Chem. Biol. Drug Des. 71: 529-532.
31. Liu Y, Sturtevant JM. 1997. Significant discrepancies between van't Hoff and calorimetric enthalpies. III. Biophys. Chem. 64: 121-126.
32. Lonhienne T, Gerday C, Feller G. 2000. Psychrophilic enzymes: revisiting the thermodynamic parameters of activation may explain local flexibility. Biochim. Biophys. Acta. 1543: 1-10.
33. Sharp K. 2001. Entropy-enthalpy compensation: fact or artifact? Protein Sci. 10: 661-667.
34. Cornish-Bowden A. 2002. Enthalpy-entropy compensation: a phantom phenomenon. J. Biosci. 27: 121-126.
35. Zhang W, Zhou Y, Becker DF. 2004. Regulation of PutA-membrane associations by flavin adenine dinucleotide reduction. Biochemistry 43: 13165-13174.
36. Cooper A. 2005. Heat capacity effects in protein folding and ligand binding: a re-evaluation of the role of water in biomolecular thermodynamics. Biophys. Chem. 115: 89-97.
37. Reshetnyak YK, Segala M, Andreev OA, Engelman DM. 2007. A monomeric membrane peptide that lives in three worlds: in solution, attached to, and inserted across lipid bilayers. Biophys. J. 93: 2363-2372.
38. Andreev OA, Dupuy AD, Segala M, Sandugu S, Serra DA, Chichester CO, Engelman DM, Reshetnyak YK. 2007. Mechanism and uses of a membrane peptide that targets tumors and other acidic tissues in vivo. Proc. Natl Acad. Sci. U. S. A. 104: 7893-7898.
39. Zoonens M, Reshetnyak YK, Engelman DM. 2008. Bilayer interactions of pHLIP, a peptide that can deliver drugs and target tumors. Biophys. J. 95: 225-235.
40. Baker BM, Murphy KP. 1998. Prediction of binding energetics from structure using empirical parameterization. Methods Enzymol. 295: 294-315.
41. Luque I, Freire E. 1998. Structure-based prediction of binding affinities and molecular design of peptide ligands. Methods Enzymol. 295: 100-127.
42. Prabhu NV, Sharp KA. 2005. Heat capacity in proteins. Annu. Rev. Phys. Chem. 56: 521-548.
43. Chaires JB. 2008. Calorimetry and thermodynamics in drug design. Annu. Rev. Biophys. 37: 135-151.
44. Bjelic S, Jelesarov I. 2008. A survey of the year 2007 literature on applications of isothermal titration calorimetry. J. Mol. Recognit. 21: 289-311.
45. Schwarz FP, Reinisch T, Hinz HJ, Surolia A. 2008. Recommendations on measurement and analysis of results obtained on biological substances using isothermal titration calorimetry - (IUPAC technical report). Pure Appl. Chem. 80: 2025-2040.
46. Liang Y. 2008. Applications of isothermal titration calorimetry in protein science. Acta Biochim. Biophys. Sin. 40: 565-576.
47. Krishnamurthy VM, Kaufman GK, Urbach AR, Gitlin I, Gudiksen KL, Weibel DB, Whitesides GM. 2008. Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and proteinligand binding. Chem. Rev. 108: 946-1051.
48. Okhrimenko O, Jelesarov M. 2008. A survey of the year 2006 literature on applications of isothermal titration calorimetry. J. Mol. Recognit. 21: 1-19.
49. Bay DC, Rommens KL, Turner RJ. 2008. Small multidrug resistance proteins: a multidrug transporter family that continues to grow. Biochim. Biophys. Acta Biomembr. 1778: 1814-1838.
50. Beckett D, Correia JJ, Detrich HW III. 2008. Linked equilibria in regulation of transcription initiation. Methods Cell Biology. Academic Press: Maryland Heights; 25-52.
51. Bouchemal K. 2008. New challenges for pharmaceutical formulations and drug delivery systems characterization using isothermal titration calorimetry. Drug Discov. Today 13: 960-972.
52. Byrne ME, Salian V. 2008. Molecular imprinting within hydrogels II: progress and analysis of the field. Int. J. Pharm. 364: 188-212.
53. Che(c)ne P. 2008. Challenges in design of biochemical assays for the identification of small molecules to target multiple conformations of protein kinases. Drug Discov. Today 13: 522-529.
54. Chow D, Nunalee ML, Lim DW, Simnick AJ, Chilkoti A. 2008. Peptidebased biopolymers in biomedicine and biotechnology. Mater. Sci. Eng. Rep. 62: 125-155.
55. Cowieson NP, Kobe B, Martin JL. 2008. United we stand: combining structural methods. Curr. Opin. Struct. Biol. 18: 617-622.
56. Doig AJ, Conn PM. 2008. Stability and design of [alpha]-helical peptides (Chapter 1). Progress in Nucleic Acid Research and Molecular Biology. Academic Press: Maryland Heights; 1-52.
57. Edwards PB, Creamer LK, Jameson GB, Abby T, Mike B, Harjinder S. 2008. Structure and stability of whey proteins. Milk Protein. Academic Press: San Diego; 163-203.
58. Farmer BT, Reitz AB, Camille Georges W. 2008. Fragment-based drug discovery. The Practice of Medicinal Chemistry, 3rd edn. Academic Press: New York; 228-243.
59. Furmaniak S, Gauden PA, Terzyk AP, Rychlicki G. 2008. Water adsorption on carbons-critical review of the most popular analytical approaches. Adv. Colloid Interface Sci. 137: 82-143.
60. Garbett NC, Chaires JB, Correia JJ, Detrich HW III. 2008. Binding: a polemic and rough guide. Methods Cell Biol. 1: 3-23.
61. Goldmann WH, Bechinger B, Lele T, Liu AL. 2008. Cytoskeletal proteins at the lipid membrane (Chapter 8). Advances in Planar Lipid Bilayers and Liposomes. Academic Press: Maryland Heights; 227-255, 263-264.
62. Hoare T, Pelton R. 2008. Characterizing charge and crosslinker distributions in polyelectrolyte microgels. Curr. Opin. Colloid Interface Sci. 13: 413-428.
63. Kumar A, Sun S-S, Lees AJ. 2008. Directed assembly metallocyclic supramolecular systems for molecular recognition and chemical sensing. Coord. Chem. Rev. 252: 922-939.
64. Lorentzen E, Conti E. 2008. Expression, reconstitution, and structure of an archaeal RNA degrading exosome. Methods Enzymol. 447: 417-435.
65. Martinez A, Calvo AC, Teigen K, Pey AL. 2008. Rescuing proteins of low kinetic stability by chaperones and natural ligands: phenylketonuria, a case study. Molecular Biology of Protein Folding, Pt A. Academic Press: Maryland Heights; 89-134.
66. Romanenko VD, Kukhar VP. 2008. Fluorinated organophosphates for biomedical targets. Tetrahedron 64: 6153-6190.
67. Saunders SRJ, Monteiro M, Rizzo F. 2008. The oxidation behaviour of metals and alloys at high temperatures in atmospheres containing water vapour: a review. Prog. Mater. Sci. 53: 775-837.
68. Street TO, Courtemanche N, Barrick D. 2008. Protein folding and stability using denaturants. Methods Cell Biol. 84: 295-325.
69. Sunarso J, Baumann S, Serra JM, Meulenberg WA, Liu S, Lin YS, Diniz da Costa JC. 2008. Mixed ionic-electronic conducting (MIEC) ceramicbased membranes for oxygen separation. J. Membr. Sci. 320: 13-41.
70. Toshima N, Yan H, Shiraishi Y, Corain B, Schmid G, Toshima N. 2008. Recent progress in bimetallic nanoparticles: their preparation, structures and functions. Metal Nanoclusters in Catalysis and Materials Science. Elsevier: Amsterdam; 49-75.
71. Weijers CAGM, Franssen MCR, Visser GM. 2008. Glycosyltransferasecatalyzed synthesis of bioactive oligosaccharides. Biotechnol. Adv. 26: 436-456.
72. Wilcox DE. 2008. Isothermal titration calorimetry of metal ions binding to proteins: an overview of recent studies. Inorg. Chim. Acta 361: 857-867.
73. Wilson WD, Tanious FA, Mathis A, Tevis D, Hall JE, Boykin DW. 2008. Antiparasitic compounds that target DNA. Biochimie 90: 999-1014.
74. Goh KKT, Sarkar A, Singh H, Abby T, Mike B, Harjinder S. 2008. Milk protein-polysaccharide interactions. Milk Proteins. Academic Press: Maryland Heights; 347-376.
75. Lewkowicz P, Kennedy JF. 2008. Analytical methods in supramolecular chemistry. Int. J. Biol. Macromol. 43: 398-399.
76. Avila LZ, Gianolio DA, Konowicz PA, Philbrook M, Santos MR, Miller RJ. 2008. Drug delivery and medical applications of chemically modified hyaluronan. Carbohydrate Chemistry, Biology and Medical Applications. Elsevier: Maryland Heights; 333-357.
77. Brown ME, Gallagher PK. 2008. Introduction to recent advances, techniques and applications of thermal analysis and calorimetry. Handbook of Thermal Analysis and Calorimetry. Elsevier Science B.V: 1-12.
78. Glass BD. 2008. Medical applications of thermal methods. Handbook of Thermal Analysis and Calorimetry. Elsevier Science B.V: 663-693.
79. Harries D, Rösgen J. 2008. A practical guide on how osmolytes modulate macromolecular properties. Methods in Cell Biology. Academic Press: 679-735.
80. Klärner F-G, Kuchenbrandt MC. 2008. Synthesis of molecular tweezers and clips by the use of a molecular lego set and their supramolecular functions. In Strategies and Tactics in Organic Synthesis. Academic Press: 99-153, I-V.
81. Korotchkina LG, Ramani K, Balu-iyer SV, Conn PM. 2008. Folding considerations for therapeutic protein formulations (Chapter 6). Progress in Nucleic Acid Research and Molecular Biology. Academic Press: 255-270.
82. Materazzi S, Michael EBaPKG. 2008. Coordination compounds and inorganics (Chapter 12). Handbook of Thermal Analysis and Calorimetry. Elsevier: Maryland Heights. 439-502.
83. Xu CP, Boks NP, de Vries J, Kaper HJ, Norde W, Busscher HJ, van der Mei HC. 2008. Staphylococcus aureus-fibronectin interactions with and without fibronectin-binding proteins and their role in adhesion and desorption. Appl. Environ. Microbiol. 74: 7522-7528.
84. Bergqvist S, Ghosh G, Komives EA. 2008. The I kappa B alpha/ NF-kappa B complex has two hot spots, one at either end of the interface. Protein Sci. 17: 2051-2058.
85. Raaf J, Brunstein E, Issinger OG, Niefind K. 2008. The interaction of CK2 alpha and CK2 beta, the subunits of protein kinase CK2, requires CK2 beta in a preformed conformation and is enthalpically driven. Protein Sci. 17: 2180-2186.
86. Anderka O, Boyken J, Aschenbach U, Batzer A, Boscheinen O, Schmoll D. 2008. Biophysical characterization of the interaction between hepatic glucokinase and its regulatory protein impact of physiological and pharmacological effectors. J. Biol. Chem. 283: 31333-31340.
87. Cyr N, Madrid KP, Strasser R, Aurousseau M, Finn R, Ausio J, Jardim A. 2008. Leishmania donovani peroxin 14 undergoes a marked conformational change following association with peroxin 5. J. Biol. Chem. 283: 31488-31499.
88. Trowitzsch S, Weber G, Luhrmann R, Wahl MC. 2008. An unusual RNA recognition motif acts as a scaffold for multiple proteins in the pre-mRNA retention and splicing complex. J. Biol. Chem. 283: 32317-32327.
89. Sharma AK, Zhou GP, Kupferman J, Surks HK, Christensen EN, Chou JJ, Mendelsohn ME, Rigby AC. 2008. Probing the Interaction between the coiled coil leucine zipper of cGMP-dependent protein kinase I alpha and the C terminus of the myosin binding subunit of the myosin light chain phosphatase. J. Biol. Chem. 283: 32860-32869.
90. Lee YT, Dimitrova YN, Schneider G, Ridenour WB, Bhattacharya S, Soss SE, Caprioli RM, Filipek A, Chazin WJ. 2008. Structure of the S100A6 complex with a fragment from the C-terminal domain of Siah-1 interacting protein: a novel mode for S100 protein target recognition. Biochemistry 47: 10921-10932.
91. Li H, Koshiba S, Hayashi F, Tochio N, Tomizawa T, Kasai T, Yabuki T, Motoda Y, Harada T, Watanabe S, Inoue M, Hayashizaki Y, Tanaka A, Kigawa T, Yokoyama S. 2008. Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode. J. Biol. Chem. 283: 27165-27178.
92. Antoniou C, Lam VQ, Fung LWM. 2008. Conformational changes at the tetramerization site of erythroid alpha-spectrin upon binding betaspectrin: a spin label EPR study. Biochemistry 47: 10765-10772.
93. Savic M, Ilic-Tomic T, Macmaster R, Vasiljevic B, Conn GL. 2008. Critical residues for cofactor binding and catalytic activity in the aminoglycoside resistance methyltransferase Sgm. J. Bacteriol. 190: 5855-5861.
94. Thomas CJ, Tall GG, Adhikari A, Sprang SR. 2008. Ric-8A catalyzes guanine nucleotide exchange on G alpha(i1) bound to the GPR/GoLoco exchange inhibitor AGS3. J. Biol. Chem. 283: 23150-23160.
95. Alford JR, Kwok SC, Roberts JN, Wuttke DS, Kendrick BS, Carpenter JF, Randolph TW. 2008. High concentration formulations of recombinant human interleukin-1 receptor antagonist: I. Physical characterization. J. Pharm. Sci. 97: 3035-3050.
96. Armstrong KM, Insaidoo FK, Baker BM. 2008. Thermodynamics of T-cell receptor-peptide/MHC interactions: progress and opportunities. J. Mol. Recognit. 21: 275-287.
97. Ishida H, Borman MA, Ostrander J, Vogel HJ, MacDonald JA. 2008. Solution structure of the calponin homology (CH) domain from the smoothelin-like 1 protein-a unique apocalmodulin-binding mode and the possible role of the C-terminal type-2 CH-domain in smooth muscle relaxation. J. Biol. Chem. 283: 20569-20578.
98. Gaetani M, Mootien S, Harper S, Gallagher PG, Speicher DW. 2008. Structural and functional effects of hereditary hemolytic anemia-associated point mutations in the alpha spectrin tetramer site. Blood 111: 5712-5720.
99. Bauer MC, O'Connell D, Cahill DJ, Linse S. 2008. Calmodulin binding to the polybasic C-termini of STIM proteins involved in store-operated calcium entry. Biochemistry 47: 6089-6091.
100. Lin MS, Chen LY, Tsai HT, Wang SSS, Chang Y, Higuchi A, Chen WY. 2008. Investigation of the mechanism of beta-amyloid fibril formation by kinetic and thermodynamic analyses. Langmuir 24: 5802-5808.
101. Ha BH, Ahn HC, Kang SH, Tanaka K, Chung CH, Kim EE. 2008. Structural basis for Ufm1 processing by UfSP1. J. Biol. Chem. 283: 14893-14900.
102. Martin SF, Tatham MH, Hay RT, Samuel IDW. 2008. Quantitative analysis of multi-protein interactions using FRET: application to the SUMO pathway. Protein Sci. 17: 777-784.
103. Portnaya I, Ben-Shoshan E, Cogan U, Khalfin R, Fass D, Ramon O, Danino D. 2008. Self-assembly of bovine beta-casein below the isoelectric pH. J. Agric. Food Chem. 56: 2192-2198.
104. Worrall JAR, Howe FS, McKay AR, Robinson CV, Luisi BF. 2008. Allosteric activation of the ATPase activity of the Escherichia coli RhIB RNA helicase. J. Biol. Chem. 283: 5567-5576.
105. Rangarajan ES, Asinas A, Proteau A, Munger C, Baardsnes J, Iannuzzi P, Matte A, Cygler M. 2008. Structure of [NiFe] hydrogenase maturation protein HypE from Escherichia coli and its interaction with HypF. J. Bacteriol. 190: 1447-1458.
106. Collins BM, Norwood SJ, Kerr MC, Mahony D, Seaman MNJ, Teasdale RD, Owen DJ. 2008. Structure of Vps26B and mapping of its interaction with the retromer protein complex. Traffic 9: 366-379.
107. Nakanishi T, Tsumoto K, Yokota A, Kondo H, Kumagai I. 2008. Critical contribution of VH-VL interaction to reshaping of an antibody: the case of humanization of anti-lysozyme antibody, HyHEL-10. Protein Sci. 17: 261-270.
108. Marri L, Trost P, Trivelli X, Gonnelli L, Pupillo P, Sparla F. 2008. Spontaneous assembly of photosynthetic supramolecular complexes as mediated by the intrinsically unstructured protein CP12. J. Biol. Chem. 283: 1831-1838.
109. Miron S, Duchambon P, Blouquit Y, Durand D, Craescu CT. 2008. The carboxy-terminal domain of xeroderma pigmentosum complementation group C protein, involved in TFIIH and centrin binding, is highly disordered. Biochemistry 47: 1403-1413.
110. Kononenko AV, Mitkevich VA, Dubovaya VI, Kolosov PM, Makarov AA, Kisselev LL. 2008. Role of the individual domains of translation termination factor eRF1 in GTP binding to eRF3. Proteins: Struct. Funct. Bioinf. 70: 388-393.
111. Bhunia A, Domadia PN, Xu XL, Gingras R, Ni F, Bhattacharjya S. 2008. Equilibrium unfolding of the dimeric SAM domain of MAPKKK Ste11 from the budding yeast: role of the interfacial residues in structural stability and binding. Biochemistry 47: 651-659.
112. Monteiro RQ, Rezaie AR, Bae JS, Calvo E, Andersen JF, Francischetti IMB. 2008. Ixolaris binding to factor X reveals a precursor state of factor Xa heparin-binding exosite. Protein Sci. 17: 146-153.
113. Babon JJ, Sabo JK, Soetopo A, Yao S, Bailey MF, Zhang J-G, Nicola NA, Norton RS. 2008. The SOCS Box Domain of SOCS3: structure and interaction with the elonginBC-cullin5 ubiquitin ligase. J. Mol. Biol. 381: 928-940.
114. Baboolal TG, Conroy MJ, Gill K, Ridley H, Visudtiphole V, Bullough PA, Lakey Jeremy H. 2008. Colicin N binds to the periphery of its receptor and translocator, outer membrane protein F. Structure 16: 371-379.
115. Baranauskiene L, Matuliene J, Matulis D. 2008. Determination of the thermodynamics of carbonic anhydrase acid-unfolding by titration calorimetry. J. Biochem. Biophys. Methods 70: 1043-1047.
116. Boehmer T, Jeudy S, Berke IC, Schwartz TU. 2008. Structural and functional studies of Nup107/Nup133 interaction and its implications for the architecture of the nuclear pore complex. Mol. Cell. 30: 721-731.
117. Bouguet-Bonnet S, Buck M. 2008. Compensatory and long-range changes in picosecond-nanosecond main-chain dynamics upon complex formation: 15N relaxation analysis of the free and bound states of the ubiquitin-like domain of human plexin-B1 and the small GTPase Rac1. J. Mol. Biol. 377: 1474-1487.
118. Buchanan G, Maillard J, Nabuurs SB, Richardson DJ, Palmer T, Sargent F. 2008. Features of a twin-arginine signal peptide required for recognition by a Tat proofreading chaperone. FEBS Lett. 582: 3979-3984.
119. Burguete AS, Fenn TD, Brunger AT, Pfeffer SR. 2008. Rab and Arl GTPase family members cooperate in the localization of the golgin GCC185. Cell 132: 286-298.
120. Cai C, Li H, Kangasniemi A, Pihlajamaa T, Von Ossowski L, Kerkelä K, Schulz S, Rivera C, Keinänen K. 2008. Somatostatin receptor subtype 1 is a PDZ ligand for synapse-associated protein 97 and a potential regulator of growth cone dynamics. Neuroscience 157: 833-843.
121. Chen W, Srinath H, Lam SS, Schiffer CA, Royer WE Jr, Lin K. 2008. Contribution of Ser386 and Ser396 to activation of interferon regulatory factor 3. J. Mol. Biol. 379: 251-260.
122. Chen Z, Singer WD, Danesh SM, Sternweis PC, Sprang SR. 2008. Recognition of the activated states of G[alpha]13 by the rgRGS domain of PDZRhoGEF. Structure 16: 1532-1543.
123. Cheng H-T, Huang K-C, Yu H-Y, Gao K-J, Zhao X, Li F, Town J, Gordon JR, Cheng J-W. 2008. A new protocol for high-yield purification of recombinant human CXCL8(3-72)K11R/G31P expressed in Escherichia coli. Protein Expr. Purif. 61: 65-72.
124. Crooks ET, Jiang P, Franti M, Wong S, Zwick MB, Hoxie JA, Robinson JE, Moore PL, Binley JM. 2008. Relationship of HIV-1 and SIV envelope glycoprotein trimer occupation and neutralization. Virology 377: 364-378.
125. Das R, Loss S, Li J, Waugh DS, Tarasov S, Wingfield PT, Byrd RA, Altieri AS. 2008. Structural biophysics of the NusB:NusE antitermination complex. J. Mol. Biol. 376: 705-720.
126. Day CL, Smits C, Fan FC, Lee EF, Fairlie WD, Hinds MG. 2008. Structure of the BH3 domains from the p53-inducible BH3-only proteins noxa and puma in complex with Mcl-1. J. Mol. Biol. 380: 958-971.
127. Del Bianco C, Aster JC, Blacklow SC. 2008. Mutational and energetic studies of notch1 transcription complexes. J. Mol. Biol. 376: 131-140.
128. Devred F, Tsvetkov PO, Barbier P, Allegro D, Horwitz SB, Makarov AA, Peyrot V. 2008. Stathmin/Op18 is a novel mediator of vinblastine activity. FEBS Lett. 582: 2484-2488.
129. Dieterle M, Blaschke T, Hasse H. 2008. Microcalorimetric study of adsorption of human monoclonal antibodies on cation exchange chromatographic materials. J. Chromatogr. A 1205: 1-9.
130. Dyson HJ, Kostic M, Liu J, Martinez-Yamout MA. 2008. Hydrogendeuterium exchange strategy for delineation of contact sites in protein complexes. FEBS Lett. 582: 1495-1500.
131. Gilbreth RN, Esaki K, Koide A, Sidhu SS, Koide S. 2008. A dominant conformational role for amino acid diversity in minimalist proteinprotein interfaces. J. Mol. Biol. 381: 407-418.
132. Harrison SL, Housden NG, Bottomley SP, Cossins AJ, Gore MG. 2008. Generation and expression of a minimal hybrid Ig-receptor formed between single domains from proteins L and G. Protein Expr. Purif. 58: 12-22.
133. Jackola DR, Blackburn C, Sveum M, Rosenberg A. 2008. Entropyfavored human antibody binding reactions with a non-infectious antigen. Mol. Immunol. 45: 1494-1500.
134. Kathir KM, Rajalingam D, Sivaraja V, Kight A, Goforth RL, Yu C, Henry R, Kumar TKS. 2008. Assembly of chloroplast signal recognition particle involves structural rearrangement in cpSRP43. J. Mol. Biol. 381: 49-60.
135. Kato M, Wynn RM, Chuang JL, Tso S-C, Machius M, Li J, Chuang DT. 2008. Structural basis for inactivation of the human pyruvate dehydrogenase complex by phosphorylation: role of disordered phosphorylation loops. Structure 16: 1849-1859.
136. Kursula I, Kursula P, Ganter M, Panjikar S, Matuschewski K, Schüler H. 2008. Structural basis for parasite-specific functions of the divergent profilin of plasmodium falciparum. Structure 16: 1638-1648.
137. LaPorte SL, Juo ZS, Vaclavikova J, Colf LA, Qi X, Heller NM, Keegan AD, Garcia KC. 2008. Molecular and structural basis of cytokine receptor pleiotropy in the interleukin-4/13 system. Cell 132: 259-272.
138. Levy ED, Pereira-Leal JB. 2008. Evolution and dynamics of protein interactions and networks. Curr. Opin. Struct. Biol. 18: 349-357.
139. Mallam AL, Onuoha SC, Grossmann JG, Jackson SE. 2008. Knotted fusion proteins reveal unexpected possibilities in protein folding. Mol. Cell. 30: 642-648.
140. McDonald CB, Seldeen KL, Deegan BJ, Lewis MS, Farooq A. 2008. Grb2 adaptor undergoes conformational change upon dimerization. Arch. Biochem. Biophys. 475: 25-35.
141. Murphy AJ, Kemp F, Love J. 2008. Surface plasmon resonance characterization of calspermin-calmodulin binding kinetics. Anal. Biochem. 376: 61-72.
142. Nakakido M, Tanaka Y, Sokabe M, Tsumoto K. 2008. Thermodynamic analysis reveals that GTP binding affects the interaction between the [alpha]- and [gamma]-subunits of translation initiation factor 2. Biochem. Biophys. Res. Commun. 371: 596-599.
143. Nisius L, Rogowski M, Vangelista L, Grzesiek S. 2008. Large-scale expression and purification of the major HIV-1 coreceptor CCR5 and characterization of its interaction with RANTES. Protein Expr. Purif. 61: 155-162.
144. Nyola A, Grell E, Solmaz S, Wenz T, Millett F, Hunte C. 2008. Characterisation of the interaction between cytochromebc1 complex and its susbtrate cytchrome c. Biochim. Biophys. Acta 1777: S104.
145. Ohlson MB, Huang Z, Alto NM, Blanc M-P, Dixon JE, Chai J, Miller SI. 2008. Structure and function of Salmonella SifA indicate that its interactions with SKIP, SseJ, and RhoA family GTPases induce endosomal tubulation. Cell Host Microbe 4: 434-446.
146. Pagano B, Martino L, Randazzo A, Giancola C. 2008. Stability and binding properties of a modified thrombin binding aptamer. Biophys. J. 94: 562-569.
147. Pryor PR, Jackson L, Gray SR, Edeling MA, Thompson A, Sanderson CM, Evans PR, Owen DJ, Luzio JP. 2008. Molecular basis for the sorting of the SNARE VAMP7 into endocytic clathrin-coated vesicles by the ArfGAP Hrb. Cell 134: 817-827.
148. Pyzik M, Kielczewska A, Vidal SM. 2008. NK cell receptors and their MHC class I ligands in host response to cytomegalovirus: insights from the mouse genome. Semin. Immunol. 20: 331-342.
149. Sahu SC, Swanson KA, Kang RS, Huang K, Brubaker K, Ratcliff K, Radhakrishnan I. 2008. Conserved themes in target recognition by the PAH1 and PAH2 domains of the Sin3 transcriptional corepressor. J. Mol. Biol. 375: 1444-1456.
150. Schulte A, Stolp B, Schönichen A, Pylypenko O, Rak A, Fackler OT, Geyer M. 2008. The human formin FHOD1 contains a bipartite structure of FH3 and GTPase-binding domains required for activation. Structure 16: 1313-1323.
151. Seldeen KL, McDonald CB, Deegan BJ, Farooq A. 2008. Thermodynamic analysis of the heterodimerization of leucine zippers of Jun and Fos transcription factors. Biochem. Biophys. Res. Commun. 375: 634-638.
152. Sharma P, Rajalingam D, Kumar TKS, Singh S. 2008. A light scattering study of the interaction of fibroblast growth factor (FGF) with its receptor. Biophys. J. 94: L71-L73.
153. Skiniotis G, Lupardus PJ, Martick M, Walz T, Garcia KC. 2008. Structural organization of a full-length gp130/LIF-R cytokine receptor transmembrane complex. Mol. Cell. 31: 737-748.
154. Tan A, Tanner JJ, Henzl MT. 2008. Energetics of OCP1-OCP2 complex formation. Biophys. Chem. 134: 64-71.
155. Tong Y, Hota PK, Hamaneh MB, Buck M. 2008. Insights into oncogenic mutations of plexin-B1 based on the solution structure of the Rho GTPase binding domain. Structure 16: 246-258.
156. Truhlar SME, Mathes E, Cervantes CF, Ghosh G, Komives EA. 2008. Pre-folding I[kappa]B[alpha] alters control of NF-[kappa]B signaling. J. Mol. Biol. 380: 67-82.
157. Tveen Jensen K, Strambini G, Gonnelli M, Broos J, Jackson JB. 2008. Mutations in transhydrogenase change the fluorescence emission state of TRP72 from 1La to 1Lb. Biophys. J. 95: 3419-3428.
158. Worrall JAR, Górna M, Crump NT, Phillips LG, Tuck AC, Price AJ, Bavro VN, Luisi BF. 2008. Reconstitution and analysis of the multienzyme Escherichia coli RNA degradosome. J. Mol. Biol. 382: 870-883.
159. Zhang W, Pochapsky SS, Pochapsky TC, Jain NU. 2008. Solution NMR structure of putidaredoxin-cytochrome P450cam complex via a combined residual dipolar coupling-spin labeling approach suggests a role for Trp106 of putidaredoxin in complex formation. J. Mol. Biol. 384: 349-363.
160. Zhou B-R, Zhou Z, Hu Q-L, Chen J, Liang Y. 2008. Mixed macromolecular crowding inhibits amyloid formation of hen egg white lysozyme. Biochim. Biophys. Acta 1784: 472-480.
161. Serfiotis-Mitsa D, Roberts GA, Cooper LP, White JH, Nutley M, Cooper A, Blakely GW, Dryden DTF. 2008. The Orf18 gene product from conjugative transposon Tn916 is an ArdA antirestriction protein that inhibits type I DNA restriction-modification systems. J. Mol. Biol. 383: 970-981.
162. Nithianantham S, Shilton BH. 2008. Analysis of the isolated SecA DEAD Motor suggests a mechanism for chemical-mechanical coupling. J. Mol. Biol. 383: 380-389.
163. Zakharova E, Horvath MP, Goldenberg DP. 2008. Functional and structural roles of the Cys14-Cys38 disulfide of bovine pancreatic trypsin inhibitor. J. Mol. Biol. 382: 998-1013.
164. Kotaka M, Johnson C, Lamb HK, Hawkins AR, Ren J, Stammers DK. 2008. Structural analysis of the recognition of the negative regulator NmrA and DNA by the zinc finger from the GATA-type transcription factor AreA. J. Mol. Biol. 381: 373-382.
165. Lorenzen K, Olia AS, Uetrecht C, Cingolani G, Heck AJR. 2008. Determination of stoichiometry and conformational changes in the first step of the P22 tail assembly. J. Mol. Biol. 379: 385-396.
166. Lefe(c)vre J, Delepelaire P, Delepierre M, Izadi-Pruneyre N. 2008. Modulation by substrates of the interaction between the HasR Outer membrane receptor and its specific TonB-like protein, HasB. J. Mol. Biol. 378: 840-851.
167. Srivastava IK, Kan E, Sun Y, Sharma VA, Cisto J, Burke B, Lian Y, Hilt S, Biron Z, Hartog K, Stamatatos L, Cheng RH, Ulmer JB, Barnett SW. 2008. Comparative evaluation of trimeric envelope glycoproteins derived from subtype C and B HIV-1 R5 isolates. Virology 372: 273-290.
168. Kish-Trier E, Briere L-AK, Dunn SD, Wilkens S. 2008. The stator complex of the A1A0-ATP synthase-structural characterization of the E and H subunits. J. Mol. Biol. 375: 673-685.
169. Kursula P, Kursula I, Massimi M, Song Y-H, Downer J, Stanley WA, Witke W, Wilmanns M. 2008. High-resolution structural analysis of mammalian profilin 2a complex formation with two physiological ligands: the formin homology 1 domain of mDia1 and the prolinerich domain of VASP. J. Mol. Biol. 375: 270-290.
170. Leone M, Cellitti J, Pellecchia M. 2008. NMR studies of a heterotypic Sam-Sam domain association: the interaction between the lipid phosphatase Ship2 and the EphA2 receptor. Biochemistry 47: 12721-12728.
171. Cai Z, Greene MI, Berezov A. 2008. Modulation of biomolecular interactions with complex-binding small molecules. Methods 46: 39-46.
172. Ran XY, Qin HN, Liu JX, Fan JS, Shi JH, Song JX. 2008. NMR structure and dynamics of human ephrin-B2 ectodomain: the functionally critical C-D and G-H loops are highly dynamic in solution. Proteins: Struct. Funct. Bioinf. 72: 1019-1029.
173. Kuba H, Furukawa A, Okajima T, Furukawa K. 2008. Efficient bacterial production of functional antibody fragments using a phagemid vector. Protein Expr. Purif. 58: 292-300.
174. Madani N, Schön A, Princiotto AM, LaLonde JM, Courter JR, Soeta T, Ng D, Wang L, Brower ET, Xiang SH, Do Kwon Y, Huang CC, Wyatt R, Kwong PD, Freire E, Smith AB, Sodroski J. 2008. Small-molecule CD4 mimics interact with a highly conserved pocket on HIV-1 gp120. Structure 16: 1689-1701.
175. Shen X, Tao W, Kong J, Yu S. 2008. The role of loops 3 and 4 in the interdomains and intersubunits communication of E. coli cAMP receptor protein. Int. J. Biol. Macromol. 42: 372-379.
176. Sun BF, Hong J, Zhang P, Dong XC, Shen X, Lin DH, Ding JP. 2008. Molecular basis of the interaction of Saccharomyces cerevisiae Eaf3 chromo domain with methylated H3K36. J. Biol. Chem. 283: 36504-36512.
177. Jones LL, Colf LA, Bankovich AJ, Stone JD, Gao YG, Chan CM, Huang RH, Garcia KC, Kranz DM. 2008. Different thermodynamic binding mechanisms and peptide fine specificities associated with a panel of structurally similar high-affinity T cell receptors. Biochemistry 47: 12398-12408.
178. Dam TK, Torres M, Brewer CF, Casadevall A. 2008. Isothermal titration calorimetry reveals differential binding thermodynamics of variable region-identical antibodies differing in constant region for a univalent ligand. J. Biol. Chem. 283: 31366-31370.
179. Garske AL, Craciun G, Denu JM. 2008. A combinatorial H4 tail library for exploring the histone code. Biochemistry 47: 8094-8102.
180. Leo JC, Elovaara H, Brodsky B, Skurnik M, Goldman A. 2008. The Yersinia adhesin YadA binds to a collagenous triple-helical conformation but without sequence specificity. Protein Eng. Des. Sel. 21: 475-484.
181. Suh JY, Cai ML, Clore GM. 2008. Impact of phosphorylation on structure and thermodynamics of the interaction between the N-terminal domain of enzyme I and the histidine phosphocarrier protein of the bacterial phosphotransferase system. J. Biol. Chem. 283: 18980-18989.
182. Lambert LJ, Bobkov AA, Smith JW, Marassi FM. 2008. Competitive interactions of collagen and a jararhagin-derived disintegrin peptide with the integrin alpha 2-I domain. J. Biol. Chem. 283: 16665-16672.
183. Udugamasooriya DG, Spaller MR. 2008. Conformational constraint in protein ligand design and the inconsistency of binding entropy. Biopolymers 89: 653-667.
184. Kral V, Mader P, Collard R, Fabry M, Horejsi M, Rezacova P, Kozisek M, Zavada J, Sedlacek J, Rulisek L, Brynda J. 2008. Stabilization of antibody structure upon association to a human carbonic anhydrase epitope studied by X-ray crystallography, microcalorimetry, and molecular dynamics simulations. Proteins: Struct. Funct. Bioinf. 71: 1275-1287.
185. Majava V, Petoukhov MV, Hayashi N, Pirila P, Svergun DI, Kursula P. 2008. Interaction between the C-terminal region of human myelin basic protein and calmodulin: analysis of complex formation and solution structure. BMC Struct. Biol. 8: 18.
186. Svenson J, Stensen W, Brandsdal BO, Haug BE, Monrad J, Svendsen JS. 2008. Antimicrobial peptides with stability toward tryptic degradation. Biochemistry 47: 3777-3788.
187. Ng C, Jackson RA, Buschdorf JP, Sun QX, Guy GR, Sivaraman J. 2008. Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates. EMBO J. 27: 804-816.
188. Lo YC, Maddineni U, Chung JY, Rich RL, Myszka DG, Wu H. 2008. High-affinity interaction between IKK beta and NEMO. Biochemistry 47: 3109-3116.
189. Di Lello P, Jenkins LMM, Mas C, Langlois C, Malitskaya E, Fradet-Turcotte A, Archambault J, Legault P, Omichinski JG. 2008. P53 and TFIIE alpha share a common binding site on the Tfb1/p62 subunit of TFIIH. Proc. Natl Acad. Sci. U. S. A. 105: 106-111.
190. Aitio O, Hellman M, Kesti T, Kleino I, Samuilova O, Pääkkönen K, Tossavainen H, Saksela K, Permi P. 2008. Structural basis of PxxDY motif recognition in SH3 binding. J. Mol. Biol. 382: 167-178.
191. Chen D-H, Luke K, Zhang J, Chiu W, Wittung-Stafshede P. 2008. Location and flexibility of the unique C-terminal tail of Aquifex aeolicus co-chaperonin protein 10 as derived by cryo-electron microscopy and biophysical techniques. J. Mol. Biol. 381: 707-717.
192. D'Agostino B, Bellofiore P, De Martino T, Punzo C, Rivieccio V, Verdoliva A. 2008. Affinity purification of IgG monoclonal antibodies using the D-PAM synthetic ligand: chromatographic comparison with protein A and thermodynamic investigation of the D-PAM/ IgG interaction. J. Immunol. Methods 333: 126-138.
193. Fiedler M, Sánchez-Barrena MJ, Nekrasov M, Mieszczanek J, Rybin V, Müller J, Evans P, Bienz M. 2008. Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex. Mol. Cell. 30: 507-518.
194. Freund SMV, Johnson CM, Jaulent AM, Ferguson N. 2008. Moving towards high-resolution descriptions of the molecular interactionsand structural rearrangements of the human hepatitis B core protein. J. Mol. Biol. 384: 1301-1313.
195. Ghetu AF, Corcoran CM, Cerchietti L, Bardwell VJ, Melnick A, Privé GG. 2008. Structure of a BCOR corepressor peptide in complex with the BCL6 BTB domain dimer. Mol. Cell. 29: 384-391.
196. Hoyer W, Härd T. 2008. Interaction of Alzheimer's A[beta] peptide with an engineered binding protein-thermodynamics and kinetics of coupled folding-binding. J. Mol. Biol. 378: 398-411.
197. Kang J, Warren AS. 2008. Thermodynamic analysis of additivity between the heavy and light chains in affinity maturation of an antibody. Mol. Immunol. 45: 304-305.
198. Kim EY, Rumpf CH, Fujiwara Y, Cooley ES, Van Petegem F, Minor DL Jr. 2008. Structures of CaV2Ca2{thorn}/CaM-IQ domain complexes reveal binding modes that underlie calcium-dependent inactivation and facilitation. Structure 16: 1455-1467.
199. McAdams K, Casper ES, Matthew Haas R, Santarsiero BD, Eggler AL, Mesecar A, Halkides CJ. 2008. The structures of T87I phosphono-CheY and T87I/Y106W phosphono-CheY help to explain their binding affinities to the FliM and CheZ peptides. Arch. Biochem. Biophys. 479: 105-113.
200. McDonald CB, Seldeen KL, Deegan BJ, Farooq A. 2008. Structural basis of the differential binding of the SH3 domains of Grb2 adaptor to the guanine nucleotide exchange factor Sos1. Arch. Biochem. Biophys. 479: 52-62.
201. Nady N, Min J, Kareta MS, Chédin F, Arrowsmith CH. 2008. A SPOT on the chromatin landscape? Histone peptide arrays as a tool for epigenetic research. Trends Biochem. Sci. 33: 305-313.
202. Okon M, Moraes TF, Lario PI, Creagh AL, Haynes CA, Strynadka NCJ, McIntosh LP. 2008. Structural characterization of the type-III pilotsecretin complex from Shigella flexneri. Structure 16: 1544-1554.
203. Robinson RA, Lu X, Jones EY, Siebold C. 2008. Biochemical and structural studies of ASPP proteins reveal differential binding to p53, p63, and p73. Structure 16: 259-268.
204. Smits C, Czabotar PE, Hinds MG, Day CL. 2008. Structural plasticity underpins promiscuous binding of the prosurvival protein A1. Structure 16: 818-829.
205. Van Petegem F, Duderstadt KE, Clark KA, Wang M, Minor DL Jr. 2008. Alanine-scanning mutagenesis defines a conserved energetic hotspot in the CaV[alpha]1 AID-CaV[beta] interaction site that is critical for channel modulation. Structure 16: 280-294.
206. Vincents B, Vindebro R, Abrahamson M, von Pawel-Rammingen U. 2008. The human protease inhibitor cystatin C is an activating cofactor for the streptococcal cysteine protease IdeS. Chem. Biol. 15: 960-968.
207. Worrall LJ, Wear MA, Page AP, Walkinshaw MD. 2008. Cloning, purification and characterization of the Caenorhabditis elegans small glutamine-rich tetratricopeptide repeat-containing protein. Biochim. Biophys. Acta 1784: 496-503.
208. Wu Y-Q, Tzekou A, Magotti P, Sfyroera G, Qu H, Ricklin D, Kay BK, Lambris JD. 2008. Identification of complement-targeting peptides using phage-display libraries. Mol. Immunol. 45: 4180-4181.
209. Benard SA, Smith TM, Cunningham K, Jacob J, DeSilva T, Lin L, Shaw GD, Kriz R, Kelleher KS. 2008. Identification of peptide antagonists to glycoprotein Ibalpha that selectively inhibit von Willebrand factor dependent platelet aggregation. Biochemistry 47: 4674-4682.
210. Zhang J, Yan X, Shi C, Yang X, Guo Y, Tian C, Long J, Shen Y. 2008. Structural basis of [beta]-catenin recognition by Tax-interacting protein-1. J. Mol. Biol. 384: 255-263.
211. Wegener KL, Basran J, Bagshaw CR, Campbell ID, Roberts GCK, Critchley DR, Barsukov IL. 2008. Structural Basis for the interaction between the cytoplasmic domain of the hyaluronate receptor layilin and the talin F3 subdomain. J. Mol. Biol. 382: 112-126.
212. Hurtado-Gómez E, Abián O, Muñoz FJ, Hernáiz MJ, Velázquez-Campoy A, Neira JL. 2008. Defining the epitope region of a peptide from the streptomyces coelicolor phosphoenolpyruvate: sugar phosphotransferase system able to bind to the enzyme I. Biophys. J. 95: 1336-1348.
213. Onuoha SC, Coulstock ET, Grossmann JG, Jackson SE. 2008. Structural studies on the co-chaperone Hop and its complexes with Hsp90. J. Mol. Biol. 379: 732-744.
214. Lata S, Roessle M, Solomons J, Jamin M, Gottlinger HG, Svergun DI, Weissenhorn W. 2008. Structural basis for autoinhibition of ESCRT-III CHMP3. J. Mol. Biol. 378: 818-827.
215. Candel AM, van Nuland NAJ, Martin-Sierra FM, Martinez JC, Conejero-Lara F. 2008. Analysis of the thermodynamics of binding of an SH3 Domain to proline-rich peptides using a chimeric fusion protein. J. Mol. Biol. 377: 117-135.
216. Cui Q, Sulea T, Schrag JD, Munger C, Hung M-N, Naïm M, Cygler M, Purisima EO. 2008. Molecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex. J. Mol. Biol. 379: 787-802.
217. Keeble AH, Joachimiak LA, Maté MJ, Meenan N, Kirkpatrick N, Baker D, Kleanthous C. 2008. Experimental and computational analyses of the energetic basis for dual recognition of immunity proteins by colicin endonucleases. J. Mol. Biol. 379: 745-759.
218. Altman MD, Nalivaika EA, Prabu-Jeyabalan M, Schiffer CA, Tidor B. 2008. Computational design and experimental study of tighter binding peptides to an inactivated mutant of HIV-1 protease. Proteins: Struct. Funct. Bioinf. 70: 678-694.
219. Cimmperman P, Baranauskiene L, Jachimoviciute S, Jachno J, Torresan J, Michailoviene V, Matuliene J, Sereikaite J, Bumelis V, Matulis D. 2008. A quantitative model of thermal stabilization and destabilization of proteins by ligands. Biophys. J. 95: 3222-3231.
220. Cuendet MA, Michielin O. 2008. Protein-protein interaction investigated by steered molecular dynamics: the TCR-pMHC complex. Biophys. J. 95: 3575-3590.
221. Radzimanowski J, Simon B, Sattler M, Beyreuther K, Sinning I, Wild K. 2008. Structure of the intracellular domain of the amyloid precursor protein in complex with Fe65-PTB2. EMBO Rep. 9: 1134-1140.
222. Lu J, Chen M, DeKoster GT, Cistola DP, Li E. 2008. The RXR[alpha] C-terminus T462 is a NMR sensor for coactivator peptide binding. Biochem. Biophys.Res. Commun. 366: 932-937.
223. de Azevedo WF, Dias R. 2008. Experimental approaches to evaluate the thermodynamics of protein-drug interactions. Curr. Drug Targets 9: 1071-1076.
224. de Rosny E, de Groot A, Jullian-Binard C, Borel F, Suarez C, Le Pape L, Fontecilla-Camps JC, Jouve HM. 2008. DHR51, the Drosophila melanogaster homologue of the human photoreceptor cell-specific nuclear receptor, is a thiolate heme-binding protein. Biochemistry 47: 13252-13260.
225. Bale S, Lopez MM, Makhatadze GI, Fang Q, Pegg AE, Ealick SE. 2008. Structural basis for putrescine activation of human S-adenosylmethionine decarboxylase. Biochemistry 47: 13404-13417.
226. Nguyen TB, Kumar E, Sil D, Wood SJ, Miller KA, Warshakoon HJ, Datta A, David SA. 2008. Controlling plasma protein binding: structural correlates of interactions of hydrophobic polyamine endotoxin sequestrants with human serum albumin. Mol. Pharma. 5: 1131-1137.
227. Garidel P, Howe J, Brandenburg K. 2008. Thermodynamic analysis of the interaction of lipopolysaccharides with cationic compounds. Eng. Life Sci. 8: 523-529.
228. Zakharov SD, Sharma O, Zhalnina MV, Cramer WA. 2008. Primary events in the colicin translocon: FRET analysis of colicin unfolding initiated by binding to BtuB and OmpF. Biochemistry 47: 12802-12809.
229. Pilotelle-Bunner A, Matthews JM, Cornelius F, Apell HJ, Sebban P, Clarke RJ. 2008. ATP binding equilibria of the Na+,K+-ATPase. Biochemistry 47: 13103-13114.
230. Ciulli A, Scott DE, Ando M, Reyes F, Saldanha SA, Tuck KL, Chirgadze DY, Blundell TL, Abell C. 2008. Inhibition of mycobacterium tuberculosis pantothenate synthetase by analogues of the reaction intermediate. Chembiochem 9: 2606-2611.
231. Behbehani GR, Divsalar A, Saboury AA, Bagheri MJ. 2008. A thermodynamic study on the binding of human serum albumin with new synthesized anti cancer Pd (II) complex. J. Solution Chem. 37: 1785-1794.
232. Sobhany M, Kakuta Y, Sugiura N, Kimata K, Negishi M. 2008. The chondroitin polymerase K4CP and the molecular mechanism of selective bindings of donor substrates to two active sites. J. Biol. Chem. 283: 32328-32333.
233. Garces F, Fernandez FJ, Gomez AM, Perez-Luque R, Campos E, Prohens R, Aguilar J, Baldoma L, Coll M, Badia J, Vega MC. 2008. Quaternary structural transitions in the DeoR-Type repressor UlaR control transcriptional readout from the L-ascorbate utilization regulon in Escherichia coli. Biochemistry 47: 11424-11433.
234. Hauryliuk V, Mitkevich VA, Eliseeva NA, Petrushanko IY, Ehrenberg M, Makarov AA. 2008. The pretranslocation ribosome is targeted byGTP-bound EF-G in partially activated form. Proc. Natl Acad. Sci. U. S. A. 105: 15678-15683.
235. Qin HN, Shi JH, Noberini R, Pasquale EB, Song JX. 2008. Crystal structure and NMR binding reveal that two small molecule antagonists target the high affinity ephrin-binding channel of the EphA4 receptor. J. Biol. Chem. 283: 29473-29484.
236. Watanabe M, Tanaka Y, Suenaga A, Kuroda M, Yao M, Watanabe N, Arisaka F, Ohta T, Tanaka I, Tsumoto K. 2008. Structural basis for multimeric heme complexation through a specific protein-heme interaction-the case of the third neat domain of IsdH from Staphylococcus aureus. J. Biol. Chem. 283: 28649-28659.
237. Zhou XD, Sun QX, Kini RM, Sivaraman J. 2008. A universal method for fishing target proteins from mixtures of biomolecules using isothermal titration calorimetry. Protein Sci. 17: 1798-1804.
238. Stockmann H, Bronowska A, Syme NR, Thompson GS, Kalverda AP, Warriner SL, Homans SW. 2008. Residual ligand entropy in the binding of p-substituted benzenesulfonamide ligands to bovine carbonic anhydrase II. J. Am. Chem. Soc. 130: 12420-12426.
239. Rambold AS, Miesbauer M, Olschewski D, Seidel R, Riemer C, Smale L, Brumm L, Levy M, Gazit E, Oesterhelt D, Baier M, Becker CFW, Engelhard M, Winklhofer KF, Tatzelt J. 2008. Green tea extracts interfere with the stress-protective activity of PrPC and the formation of PrPSc. J. Neurochem. 107: 218-229.
240. Jung JM, Savin G, Pouzot M, Schmitt C, Mezzenga R. 2008. Structure of heat-induced beta-lactoglobulin aggregates and their complexes with sodium-dodecyl sulfate. Biomacromolecules 9: 2477-2486.
241. Thoppil AA, Sharma R, Kishore N. 2008. Complexation of beta-lactam antibiotic drug carbenicillin to bovine serum albumin: energetics and conformational studies. Biopolymers 89: 831-840.
242. Kuhlmann SI, van Scheltinga ACT, Bienert R, Kunte HJ, Ziegler C. 2008. 1.55 angstrom structure of the ectoine binding protein TeaA of the osmoregulated TRAP-transporter TeaABC from Halomonas elongata. Biochemistry 47: 9475-9485.
243. Yip KW, Godoi PHC, Zhai DY, Garcia X, Cellitti JF, Cuddy M, Gerlic M, Chen Y, Satterthwait A, Vasile S, Sergienko E, Reed JC. 2008. A TR3/Nur77 peptide-based high-throughput fluorescence polarization screen for small molecule Bcl-B inhibitors. J. Biomol. Screening 13: 665-673.
244. Rezacova P, Kozisek M, Moy SF, Sieglova I, Joachimiak A, Machlus M, Otwinowski Z. 2008. Crystal structures of the effector-binding domain of repressor central glycolytic gene Regulator from Bacillus subtilis reveal ligand-induced structural changes upon binding of several glycolytic intermediates. Mol. Microbiol. 69: 895-910.
245. Taheri-Kafrani A, Bordbar AK, Mousavi SHA, Haertle T. 2008. Beta-lactoglobulin structure and retinol binding changes in presence of anionic and neutral detergents. J. Agric. Food Chem. 56: 7528-7534.
246. Arvizu-Flores AA, Sugich-Miranda R, Arreola R, Garcia-Orozco KD, Velazquez-Contreras EF, Montfort WR, Maley F, Sotelo-Mundo RR. 2008. Role of an invariant lysine residue in folate binding on Escherichia coli thymidylate synthase: calorimetric and crystallographic analysis of the K48Q mutant. Int. J. Biochem. Cell Biol. 40: 2206-2217.
247. Wang E, Bauer MC, Rogstam A, Linse S, Logan DT, vonWachenfeldt C. 2008. Structure and functional properties of the Bacillus subtilis transcriptional repressor Rex. Mol. Microbiol. 69: 466-478.
248. Rester U. 2008. From virtuality to reality-virtual screening in lead discovery and lead optimization: a medicinal chemistry perspective. Curr. Opin. Drug Discov. Devel. 11: 559-568.
249. Phenix CR, Nienaber K, Tam PH, Delbaere LTJ, Palmer DRJ. 2008. Structural, functional and calorimetric investigation of MosA, a dihydrodipicolinate synthase from Sinorhizobium meliloti L5-30, does not support involvement in rhizopine biosynthesis. Chembiochem 9: 1591-1602.
250. Calamini B, Santarsiero BD, Boutin JA, Mesecar AD. 2008. Kinetic, thermodynamic and X-ray structural insights into the interaction of melatonin and analogues with quinone reductase 2. Biochem. J. 413: 81-91.
251. Sanchez M, Aranda FJ, Espuny MJ, Marques A, Teruel JA, Manresa A, Ortiz A. 2008. Thermodynamic and structural changes associated with the interaction of a dirhamnolipid biosurfactant with bovine serum albumin. Langmuir 24: 6487-6495.
252. Spuches AM, Wilcox DE. 2008. Monomethylarsenite competes with Zn2+ for binding sites in the glucocorticoid receptor. J. Am. Chem. Soc. 130: 8148-8156.
253. Thielges MC, Zimmermann J, Yu W, Oda M, Romesberg FE. 2008. Exploring the energy landscape of antibody-antigen complexes: protein dynamics, flexibility, and molecular recognition. Biochemistry 47: 7237-7247.
254. Singh SK, Kishore N. 2008. Calorimetric and spectroscopic studies on the interaction of methimazole with bovine serum albumin. J. Pharm. Sci. 97: 2362-2372.
255. Wu B, Wang LS, Gao PJ. 2008. Structural changes of celloblohydrolase I (1,4-beta-D-glucan-cellobiohydrolase I, CBHI) and PNPC (p-nitrophenyl-beta-D-cellobloside) during the binding process. Sci. China, C, Life Sci. 51: 459-469.
256. Suji G, Khedkar SA, Singh SK, Kishore N, Coutinho EC, Bhor VM, Sivakami S. 2008. Binding of lipoic acid induces conformational change and appearance of a new binding site in methylglyoxal modified serum albumin. Protein J. 27: 205-214.
257. Maatta JAE, Airenne TT, Nordlund HR, Janis J, Paldanius TA, Vainiotalo P, Johnson MS, Kulomaa MS, Hytonen VR. 2008. Rational modification of ligand-binding preference of avidin by circular permutation and mutagenesis. Chembiochem 9: 1124-1135.
258. Suzuki R, Wada J, Katayama T, Fushinobu S, Wakagi T, Shoun H, Sugimoto H, Tanaka A, Kumagai H, Ashida H, Kitaoka M, Yamamoto K. 2008. Structural and thermodynamic analyses of solute-binding protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I. J. Biol. Chem. 283: 13165-13173.
259. Xie H. 2008. Activity assay of membrane transport proteins. Acta Biochim. Biophys. Sin. 40: 269-277.
260. Behbehani GR, Saboury AA, Taleshi E. 2008. Determination of partial unfolding enthalpy for lysozyme upon interaction with dodecyltrimethylammonium bromide using an extended solvation model. J. Mol. Recognit. 21: 132-135.
261. Kornblatt JA, Zhou JM, Ibrahim RK. 2008. Structure-activity relationships of wheat flavone O-methyltransferase-a homodimer of convenience. FEBS J. 275: 2255-2266.
262. Behbehani GR, Saboury AA, Taleshi E. 2008. A comparative study of the direct calorimetric determination of the denaturation enthalpy for lysozyme in sodium dodecyl sulfate and dodecyltrimethylammonium bromide solutions. J. Solution Chem. 37: 619-629.
263. Anderka O, Loenze P, Klabunde T, Dreyer MK, Defossa E, Wendt KU, Schmoll D. 2008. Thermodynamic characterization of allosteric glycogen phosphorylase inhibitors. Biochemistry 47: 4683-4691.
264. Neu U, Woellner K, Gauglitz G, Stehle T. 2008. Structural basis of GM1 ganglioside recognition by simian virus 40. Proc. Natl Acad. Sci. U. S. A. 105: 5219-5224.
265. Joshi SB, Kamerzell TJ, McNown C, Middaugh CR. 2008. The interaction of heparin/polyanions with bovine, porcine, and human growth hormone. J. Pharm. Sci. 97: 1368-1385.
266. Szurmak B, Wyslouch-Cieszynska A, Wszelaka-Rylik M, Bal W, Dobrzanska M. 2008. A diadenosine 5',5''-p(1)p(4) tetraphosphate (AP(4)A) hydrolase from Arabidopsis thaliana that is activated preferentially by Mn2+ ions. Acta Biochim. Pol. 55: 151-160.
267. Stadlbauer S, Riechers A, Spath A, Konig B. 2008. Utilizing reversible copper(II) peptide coordination in a sequence-selective luminescent receptor. Chem. Eur. J. 14: 2536-2541.
268. Zhang GJ, Keita B, Craescu CT, Miron S, de Oliveira P, Nadjo L. 2008. Molecular interactions between Wells-Dawson type polyoxometalates and human serum albumin. Biomacromolecules 9: 812-817.
269. Panyukov YV, Nemykh MA, Dobrov EN, Drachev VA. 2008. Surfactant-induced amorphous aggregation of tobacco mosaic virus coat protein: a physical methods approach. Macromol. Biosci. 8: 199-209.
270. Domadia PN, Bhunia A, Sivaraman J, Swarup S, Dasgupta D. 2008. Berberine targets assembly of Escherichia coli cell division protein FtsZ. Biochemistry 47: 3225-3234.
271. Ouellet H, Podust LM, de Montellano PRO. 2008. Mycobacterium tuberculosis CYP130-crystal structure, biophysical characterization, and interactions with antifungal azole drugs. J. Biol. Chem. 283: 5069-5080.
272. Mayer M, Semetey V, Gitlin I, Yang J, Whitesides GM. 2008. Using ion channel-forming peptides to quantify protein-ligand interactions. J. Am. Chem. Soc. 130: 1453-1465.
273. Mattoo AR, Zaman MS, Dubey GP, Arora A, Narayan A, Jailkhani N, Rathore K, Maiti S, Singh Y. 2008. Spo0B of Bacillus anthracis-a protein with pleiotropic functions. FEBS J. 275: 739-752.
274. Yang K, Strauss E, Huerta C, Zhang H. 2008. Structural basis for substrate binding and the catalytic mechanism of type III pantothenate kinase. Biochemistry 47: 1369-1380.
275. Tanimoto K, Le T, Zhu L, Chen J, Featherstone JDB, Li W, DenBesten P. 2008. Effects of fluoride on the interactions between amelogenin and apatite crystal. J. Dent. Res. 87: 39-44.
276. Abad MC, Askari H, O'Neill J, Klinger AL, Milligan C, Lewandowski F, Springer B, Spurlino J, Rentzeperis D. 2008. Structural determination of estrogen-related receptor [gamma] in the presence of phenol derivative compounds. J. Steroid Biochem. Mol. Biol. 108: 44-54.
277. Behbehani GR, Saboury AA, Taleshi E. 2008. A direct calorimetric determination of denaturation enthalpy for lysozyme in sodium dodecyl sulfate. Colloids Surf. B 61: 224-228.
278. Bordbar A-K, Taheri-Kafrani A, Mousavi SH-A, Haertlé T. 2008. Energetics of the interactions of human serum albumin with cationic surfactant. Arch. Biochem. Biophys. 470: 103-110.
279. Cen X, Yu L, Yu C-A. 2008. Domain movement of iron sulfur protein in cytochrome bc1 complex is facilitated by the electron transfer from cytochrome bL to bH. FEBS Lett. 582: 523-526.
280. Cheema MA, Taboada P, Barbosa S, Gutiérrez-Pichel M, Castro E, Siddiq M, Mosquera V. 2008. Energetics of binding and protein unfolding upon amphiphilic drug complexation with a globular protein in different aqueous media. Colloids Surf. B 63: 217-228.
281. Cremades N, Sancho J. 2008. Molten globule and native state ensemble of helicobacter pylori flavodoxin: can crowding, osmolytes or cofactors stabilize the native conformation relative to the molten globule? Biophys. J. 95: 1913-1927.
282. Dormitzer PR, Ulmer JB, Rappuoli R. 2008. Structure-based antigen design: a strategy for next generation vaccines. Trends Biotechnol. 26: 659-667.
283. Gao H-W, Xu Q, Chen L, Wang S-L, Wang Y, Wu L-L, Yuan Y. 2008. Potential protein toxicity of synthetic pigments: binding of poncean S to human serum albumin. Biophys. J. 94: 906-917.
284. George R, Schuller AC, Harris R, Ladbury JE. 2008. A phosphorylation- dependent gating mechanism controls the SH2 domain interactions of the Shc adaptor protein. J. Mol. Biol. 377: 740-747.
285. Helppolainen SH, Määttä JAE, Halling KK, Slotte JP, Hytönen VP, Jänis J, Vainiotalo P, Kulomaa MS, Nordlund HR. 2008. Bradavidin II from Bradyrhizobium japonicum: a new avidin-like biotin-binding protein. Biochim. Biophys. Acta Proteins Proteom. 1784: 1002-1010.
286. Kinsley N, Sayed Y, Mosebi S, Armstrong RN, Dirr HW. 2008. Characterization of the binding of 8-anilinonaphthalene sulfonate to rat class Mu GSTM1-1. Biophys. Chem. 137: 100-104.
287. Lee KL, Behnke ML, Foley MA, Chen L, Wang W, Vargas R, Nunez J, Tam S, Mollova N, Xu X, Shen MWH, amarao MK, Goodwin DG, Nickerson-Nutter CL, Abraham WM, Williams C, Clark JD, McKew JC. 2008. Benzenesulfonamide indole inhibitors of cytosolic phospholipase A2[alpha]: optimization of in vitro potency and rat pharmacokinetics for oral efficacy. Bioorg. Med. Chem. 16: 1345-1358.
288. Mans BJ, Ribeiro JMC. 2008. Function, mechanism and evolution of the moubatin-clade of soft tick lipocalins. Insect Biochem. Mol. Biol. 38: 841-852.
289. Mans BJ, Ribeiro JMC. 2008. A novel clade of cysteinyl leukotriene scavengers in soft ticks. Insect Biochem. Mol. Biol. 38: 862-870.
290. Otzen DE, Nesgaard LW, Andersen KK, Hansen JH, Christiansen G, Doe H, Sehgal P. 2008. Aggregation of S6 in a quasi-native state by sub-micellar SDS. Biochim. Biophys. Acta 1784: 400-414.
291. Rajalingam D, Kathir KM, Ananthamurthy K, Adams PD, Kumar TKS. 2008. A method for the prevention of thrombin-induced degradation of recombinant proteins. Anal. Biochem. 375: 361-363.
292. Rajangam K, Arnold MS, Rocco MA, Stupp SI. 2008. Peptide amphiphile nanostructure-heparin interactions and their relationship to bioactivity. Biomaterials 29: 3298-3305.
293. Ramarao MK, Shen MWH, Murphy EA, Duan W, Zhao Y, McKew J, Lee KL, Thakker P, Behnke ML, Clark JD. 2008. Thermodynamic characterization of cytosolic phospholipase A2 alpha inhibitors. Anal. Biochem. 383: 217-225.
294. Rispens T, Lakemond CMM, Derksen NIL, Aalberse RC. 2008. Detection of conformational changes in immunoglobulin G using isothermal titration calorimetry with low-molecular-weight probes. Anal. Biochem. 380: 303-309.
295. Sharma R, Kishore N. 2008. Isothermal titration calorimetric and spectroscopic studies on (alcohol+salt) induced partially folded state of [alpha]-lactalbumin and its binding with 8-anilino-1-naphthalenesulfonic acid. J. Chem. Thermodyn. 40: 1141-1151.
296. Silva-Alves JM, Mares-Guia TR, Oliveira JS, Costa-Silva CCSS, Bretz PCR, Araújo SS, Ferreira E, Coimbra CC, Sogayar MC, ReisJunior R, Mares-Guia ML, Santoro MM. 2008. Glucose-induced heat production, insulin secretion and lactate production in isolated Wistar rat pancreatic islets. Thermochim. Acta 474: 67-71.
297. Soykut EA, Dudak FC. BoyacI IH. 2008.Selection of staphylococcal enterotoxin B (SEB)-binding peptide using phage display technology. Biochem. Biophys. Res. Commun. 370: 104-108.
298. Stanley C, Krueger S, Parsegian VA, Rau DC. 2008. Protein structure and hydration probed by SANS and osmotic stress. Biophys. J. 94: 2777-2789.
299. Steuber H, Heine A, Podjarny A, Klebe G. 2008. Merging the binding sites of aldose and aldehyde reductase for detection of inhibitor selectivity-determining features. J. Mol. Biol. 379: 991-1016.
300. Todorova NA, Doseeva V, Ramprakash J, Schwarz FP. 2008. Effect of the distal C162S mutation on the energetics of drug binding to p38[alpha] MAP kinase. Arch. Biochem. Biophys. 469: 232-242.
301. Wälti MA, Walser PJ, Thore S, Grünler A, Bednar M, Künzler M, Aebi M. 2008. Structural basis for chitotetraose coordination by CGL3, a novel galectin-related protein from Coprinopsis cinerea. J. Mol. Biol. 379: 146-159.
302. Wu H, Zhu A, Yuan L. 2008. Interactions between O-carboxymethylchitosan and bovine serum albumin. Mater. Chem. Phys. 112: 41-46.
303. Yoshimizu M, Tajima Y, Matsuzawa F, Aikawa SI, Iwamoto K, Kobayashi T, Edmunds T, Fujishima K, Tsuji D, Itoh K, Ikekita M, Kawashima I, Sugawara K, Ohyanagi N, Suzuki T, Togawa T, Ohno K, Sakuraba M. 2008. Binding parameters and thermodynamics of the interaction of imino sugars with a recombinant human acid [alpha]-glucosidase (alglucosidase alfa): insight into the complex formation mechanism. Clin. Chim. Acta 391: 68-73.
304. Zakariassen H, Cederkvist FH, Harbitz E, Shimizu T, Lange R, Mayer B, Gorren ACF, Andersson KK, Sørlie M. 2008. Thermodynamic analysis of l-arginine and N[omega]-hydroxy-l-arginine binding to nitric oxide synthase. Biochim. Biophy. Acta 1784: 806-810.
305. Zhou X, Tan T-C, Valiyaveettil S, Go ML, Manjunatha Kini R, Velazquez-Campoy A, Sivaraman J. 2008. Structural characterization of myotoxic ecarpholin S from Echis carinatus venom. Biophys. J. 95: 3366-3380.
306. Ziegler A, Seelig J. 2008. Binding and clustering of glycosaminoglycans: a common property of mono- and multivalent cell-penetrating compounds. Biophys. J. 94: 2142-2149.
307. Cao R, Chen CK, Guo RT, Wang AH, Oldfield E. 2008. Structures of a potent phenylalkyl bisphosphonate inhibitor bound to farnesyl and geranylgeranyl diphosphate synthases. Proteins 73: 431-439.
308. Phenix CP, Palmer DRJ. 2008. Isothermal titration microcalorimetry reveals the cooperative and noncompetitive nature of inhibition of Sinorhizobium meliloti L5-30 dihydrodipicolinate synthase by (S)-lysine. Biochemistry 47: 7779-7781.
309. Contreras LM, Gómez J, Prieto J, Clemente-Jiménez JM, Las Heras-Vázquez FJ, Rodríguez-Vico F, Blanco FJ, Neira JL. 2008. The family 52 [beta]-xylosidase from Geobacillus stearothermophilus is a dimer: structural and biophysical characterization of a glycoside hydrolase. Biochim. Biophys. Acta 1784: 1924-1934.
310. Sunita S, Tkaczuk KL, Purta E, Kasprzak JM, Douthwaite S, Bujnicki JM, Sivaraman J. 2008. Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes. J. Mol. Biol. 383: 652-666.
311. Vamvaca K, Jelesarov I, Hilvert D. 2008. Kinetics and thermodynamics of ligand binding to a molten globular enzyme and its native counterpart. J. Mol. Biol. 382: 971-977.
312. Yakamavich JA, Baker TA, Sauer RT. 2008. Asymmetric nucleotide transactions of the HslUV protease. J. Mol. Biol. 380: 946-957.
313. Muralidhara BK, Sun L, Negi S, Halpert JR. 2008. Thermodynamic fidelity of the mammalian cytochrome P450 2B4 active site in binding substrates and inhibitors. J. Mol. Biol. 377: 232-245.
314. Lee JH, Kang GB, Lim H-H, Jin KS, Kim S-H, Ree M, Park C-S, Kim S-J, Eom SH. 2008. Crystal structure of the GluR0 ligand-binding core from Nostoc punctiforme in complex with L-glutamate: structural dissection of the ligand interaction and subunit interface. J. Mol. Biol. 376: 308-316.
315. Meyer S, Scrima A, Versées W, Wittinghofer A. 2008. Crystal structures of the conserved tRNA-modifying enzyme GidA: implications for its interaction with MnmE and substrate. J. Mol. Biol. 380: 532-547.
316. Hillig RC, Urlinger S, Fanghänel J, Brocks B, Haenel C, Stark Y, Sülzle D, Svergun DI, Baesler S, Malawski G, Moosmayer D, Menrad A, Schirner M, Licha K. 2008. Fab MOR03268 triggers absorption shift of adiagnostic dye via packaging in a solvent-shielded Fab dimer interface. J. Mol. Biol. 377: 206-219.
317. Workman P, Collins I. 2008. Modern cancer drug discovery: integrating targets, technologies and treatments. Cancer Drug Design and Discovery. Academic Press: New York; 3-38.
318. Rondeau J-M, Schreuder H, Camille GeorgesW. 2008. Protein crystallography and drug discovery. The Practice of Medicinal Chemistry, 3rd edn. Academic Press: New York; 605-634.
319. Schweinsberg S, Moll D, Burghardt NCG, Hahnefeld C, Schwede F, Zimmermann B, Drewianka S, Werner L, Kleinjung F, Genieser HG, Schuchhardt J, Herberg FW. 2008. Systematic interpretation of cyclic nucleotide binding studies using KinetXBase. Proteomics 8: 1212-1220.
320. Chopra S, Dooling RM, Horner CG, Howell EE. 2008. A balancing act between net uptake of water during dihydrofolate binding and net release of water upon NADPH binding in R67 dihydrofolate reductase. J. Biol. Chem. 283: 4690-4698.
321. Tew DJ, Bottomley SP, Smith DP, Ciccotosto GD, Babon J, Hinds MG, Masters CL, Cappai R, Barnham KJ. 2008. Stabilization of neurotoxic soluble [beta]-sheet-rich conformations of the Alzheimer's disease amyloid-[beta] peptide. Biophys. J. 94: 2752-2766.
322. Bou-Abdallah F, Zhao G, Biasiotto G, Poli M, Arosio P, Chasteen ND. 2008. Facilitated diffusion of iron(II) and dioxygen substrates into human H-chain ferritin. A fluorescence and absorbance study employing the ferroxidase center substitution Y34W. J. Am. Chem. Soc. 130: 17801-17811.
323. Behbehani GR, Saboury AA, Divsalar A. 2008. Thermodynamic study of the binding of calcium and magnesium ions with myelin basic protein using the extended solvation theory. Acta Biochim. Biophys. Sin. 40: 964-969.
324. Qi ZD, Lin Y, Zhou B, Ren XD, Pang DW, Liu Y. 2008. Characterization of the mechanism of the staphylococcus aureus cell envelope by bacitracin and bacitracin-metal ions. J. Membr. Biol. 225: 27-37.
325. Bagai I, Rensing C, Blackburn NJ, McEvoy MM. 2008. Direct metal transfer between periplasmic proteins identifies a bacterial copper chaperone. Biochemistry 47: 11408-11414.
326. Celic A, Petri ET, Demeler B, Ehrlich BE, Boggon TJ. 2008. Domain mapping of the polycystin-2 C-terminal tail using de novo molecular modeling and biophysical analysis. J. Biol. Chem. 283: 28305-28312.
327. Ahmad MF, Singh D, Taiyab A, Ramakrishna T, Raman B, Rao CM. 2008. Selective Cu2+ binding, redox silencing, and cytoprotective effects of the small heat shock proteins alpha A- and alpha B-crystallin. J. Mol. Biol. 382: 812-824.
328. Forest A, Swulius MT, Tse JKY, Bradshaw JM, Gaertner T, Waxham MN. 2008. Role of the N- and C-lobes of calmodulin in the activation of Ca2+/calmodulin-dependent protein kinase II. Biochemistry 47: 10587-10599.
329. Lin YP, Raman R, Sharma Y, Chang YF. 2008. Calcium binds to leptospiral immunoglobulin-like protein, LigB, and modulates fibronectin binding. J. Biol.Chem. 283: 25140-25149.
330. Behbehani GR, Saboury AA, Baghery AF, Abedini A. 2008. Application of an extended solvation theory to study on the binding of magnesium ion with myelin basic protein. J. Therm. Ana.l Calorim. 93: 479-483.
331. Henzl MT, Davis ME, Tan A. 2008. Divalent ion binding properties of the timothy grass allergen, Phl p 7. Biochemistry 47: 7846-7856.
332. Behbehani GR, Saboury AA, Baghery AF. 2008. A new approach for titration calorimetric data analysis on the binding of magnesium ion with myelin basic protein. J. Solution Chem. 37: 1127-1135.
333. Hu NJ, Yusof AM, Winter A, Osman A, Reeve AK, Hofmann A. 2008. The crystal structure of calcium-bound annexin Gh1 from Gossypium hirsutum and its implications for membrane binding mechanisms of plant annexins. J. Biol. Chem. 283: 18314-18322.
334. Kondapalli KC, Kok NM, Dancis A, Stemmler TL. 2008. Drosophila frataxin: an iron chaperone during cellular Fe-S cluster bioassembly. Biochemistry 47: 6917-6927.
335. Huang J, Dizin E, Cowan JA. 2008. Mapping iron binding sites on human frataxin: implications for cluster assembly on the ISUFe-S cluster scaffold protein. J. Biol. Inorg. Chem. 13: 825-836.
336. Mukherjee M, Zhu X, Ogawa MY. 2008. Cd2+-induced conformational change of a synthetic metallopeptide: slow metal binding followed by a slower conformational change. Inorg. Chem. 47: 4430-4432.
337. Loaiza A, Armstrong KM, Baker BM, Abu-Omar MM. 2008. Kinetics of thermal unfolding of phenylalanine hydroxylase variants containing different metal cofactors (Fe-II, Co-II, and Zn-II) and their lsokinetic relationship. Inorg. Chem. 47: 4877-4883.
338. Liaw CC, Yang YL, Chen M, Chang FR, Chen SL, Wu SH, Wu YC. 2008. Mono-tetrahydrofuran annonaceous acetogenins from Annona squamosa as cytotoxic agents and calcium ion chelators. J. Nat. Prod. 71: 764-771.
339. Behbehani GR, Saboury AA, Baghery AF. 2008. A thermodynamic study on the binding of cobalt ion with myelin basic protein. Bull Korean Chem. Soc. 29: 736-740.
340. Kimura Y, Hirano Y, Yu LJ, Suzuki H, Kobayashi M, Wang ZY. 2008. Calcium ions are involved in the unusual red shift of the lightharvesting 1 Q(y) transition of the core complex in thermophilic purple sulfur bacterium Thermochromatium tepidum. J. Biol. Chem. 283: 13867-13873.
341. Brazier MW, Davies P, Player E, Marken F, Viles JH, Brown DR. 2008. Manganese binding to the prion protein. J. Biol. Chem. 283: 12831-12839.
342. Chekmeneva E, Prohens R, Diaz-Cruz JM, Arino C, Esteban M. 2008. Competitive binding of Cd and Zn with the phytochelatin (gamma-Glu-Cys)(4)-Gly: comparative study by mass spectrometry, voltammetry-multivariate curve resolution, and isothermal titration calorimetry. Environ. Sci. Technol. 42: 2860-2866.
343. Bauer MC, Nilsson H, Thulin E, Frohm B, Malm J, Linse S. 2008. Zn2+ binding to human calbindin D-28k and the role of histidine residues. Protein Sci. 17: 760-767.
344. Hong L, Bush WD, Hatcher LQ, Simon J. 2008. Determining thermodynamic parameters from isothermal calorimetric isotherms of the binding of macromolecules to metal cations originally chelated by a weak ligand. J. Phys. Chem. B 112: 604-611.
345. Rezacova P, Borek D, Moy SF, Joachimiak A, Otwinowski Z. 2008. Crystal structure and putative function of small Toprim domaincontaining protein from Bacillus stearothermophilus. Proteins: Struct. Funct. Bioinf. 70: 311-319.
346. Dublin SN, Conticello VP. 2008. Design of a selective metal ion switch for self-assembly of peptide-based fibrils. J. Am. Chem. Soc. 130: 49-51.
347. Chekmeneva E, Prohens R, Díaz-Cruz JM, Ariño C, Esteban M. 2008. Thermodynamics of Cd2+ and Zn2+ binding by the phytochelatin ([gamma]-Glu-Cys)4-Gly and its precursor glutathione. Anal. Biochem. 375: 82-89.
348. Garcia AF, Garcia W, Nonato MC, Araújo APU. 2008. Structural stability and reversible unfolding of recombinant porcine S100A12. Biophys. Chem. 134: 246-253.
349. Kayatekin C, Zitzewitz JA, Matthews CR. 2008. Zinc binding modulates the entire folding free energy surface of human Cu,Zn superoxide dismutase. J. Mol. Biol. 384: 540-555.
350. Liao J-M, Mo Z-Y, Wu L-J, Chen J, Liang Y. 2008. Binding of calcium ions to ras promotes ras guanine nucleotide exchange under emulated physiological conditions. Biochim. Biophys. Acta Proteins Proteom. 1784: 1560-1569.
351. Murai MJ, Sassonia RC, Zamboni AH, Conte FF, Martins-de-Souza D, Aparicio R, de Oliveira MG, Lopes-Cendes I. 2008. Characterization of the C-terminal half of human juvenile myoclonic epilepsy protein EFHC1: dimer formation blocks Ca2+ and Mg2+ binding to its functional EF-hand. Arch. Biochem. Biophys. 477: 131-138.
352. Ngu-Schwemlein M, Gilbert W, Askew K, Schwemlein S. 2008. Thermodynamics and fluorescence studies of the interactions of cyclooctapeptides with Hg2+, Pb2+, and Cd2+. Bioorg. Med. Chem. 16: 5778-5787.
353. Shen KC, Kuczynska DA, Wu IJ, Murray BH, Sheckler LR, Rudenko G. 2008. Regulation of neurexin 1[beta] tertiary structure and ligand binding through alternative splicing. Structure 16: 422-431.
354. Zambelli B, Danielli A, Romagnoli S, Neyroz P, Ciurli S, Scarlato V. 2008. High-affinity Ni2+ binding selectively promotes binding of helicobacter pylori NikR to its target urease promoter. J. Mol. Biol. 383: 1129-1143.
355. Aravind P, Chandra K, Reddy PP, Jeromin A, Chary KVR, Sharma Y. 2008. Regulatory and structural EF-hand motifs of neuronal calcium sensor-1: Mg2+ modulates Ca2+ binding, Ca2+-induced conformational changes, and equilibrium unfolding transitions. J. Mol. Biol. 376: 1100-1115.
356. Gao YG, Suzuki H, Itou H, Zhou Y, Tanaka Y, Wachi M, Watanabe N, Tanaka I, Yao M. 2008. Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization. Nucleic Acids Res. 36: 7110-7123.
357. Jenkins JL, Shen HH, Green MR, Kielkopf CL. 2008. Solution conformation and thermodynamic characteristics of RNA binding by the splicing factor U2AF(65). J. Biol. Chem. 283: 33641-33649.
358. Panja S, Aich P, Jana B, Basu T. 2008. Plasmid DNA binds to the core oligosaccharide domain of LPS molecules of E-coli cell surface in the CaCl2-mediated transformation process. Biomacromolecules 9: 2501-2509.
359. Maiti A, Morgan MT, Pozharski E, Drohat AC. 2008. Crystal structure of human thymine DNA glycosylase bound to DNA elucidates sequence-specific mismatch recognition. Proc. Natl Acad. Sci. U. S. A. 105: 8890-8895.
360. Wahid AM, Coventry VK, Conn GL. 2008. Systematic deletion of the adenovirus-associated RNA(I) terminal stem reveals a surprisingly active RNA inhibitor of double-stranded RNA-activated protein kinase. J. Biol. Chem. 283: 17485-17493.
361. Deleeuw L, Tchernatynskaia V, Lane AN. 2008. Thermodynamics and specificity of the Mbp1-DNA interaction. Biochemistry 47: 6378-6385.
362. Meulen KAV, Saecker RM, Record MT. 2008. Formation of a wrapped DNA-protein interface: experimental characterization and analysis of the large contributions of ions and water to the thermodynamics of binding IHF to H' DNA. J. Mol. Biol. 377: 9-27.
363. Chen SH, Suzuki CK, Wu SH. 2008. Thermodynamic characterization of specific interactions between the human Lon protease and G-quartet DNA. Nucleic Acids Res. 36: 1273-1287.
364. Inomata K, Ohki I, Tochio H, Fujiwara K, Hiroaki H, Shirakawat M. 2008. Kinetic and thermodynamic evidence for flipping of a methyl-CpG binding domain on methylated DNA. Biochemistry 47: 3266-3271.
365. Del Vecchio P, Carullo P, Barone G, Pagano B, Graziano G, Iannetti A, Acquaviva R, Leonardi A, Formisano S. 2008. Conformational stability and DNA binding energetics of the rat thyroid transcription factor 1 homeodomain. Proteins: Struct. Funct. Bioinf. 70: 748-760.
366. Barabas O, Ronning DR, Guynet C, Hickman AB, Ton-Hoang B, Chandler M, Dyda F. 2008. Mechanism of IS200/IS605 family DNA transposases: activation and transposon-directed target site selection. Cell 132: 208-220.
367. Bates DL, Barthel KKB, Wu Y, Kalhor R, Stroud JC, Giffin MJ, Chen L. 2008. Crystal structure of NFAT bound to the HIV-1 LTR tandem [kappa]B enhancer element. Structure 16: 684-694.
368. Bourbigot S, Ramalanjaona N, Boudier C, Salgado GFJ, Roques BP, Mély Y, Bouaziz S, Morellet N. 2008. How the HIV-1 nucleocapsid protein binds and destabilises the (-) primer binding site during reverse transcription. J. Mol. Biol. 383: 1112-1128.
369. Bredenberg JH, Russo C, Fenley MO. 2008. Salt-mediated electrostatics in the association of TATA binding proteins to DNA: a combined molecular mechanics/Poisson-Boltzmann study. Biophys. J. 94: 4634-4645.
370. Lacal J, Guazzaroni ME, Busch A, Krell T, Ramos JL. 2008. Hierarchical binding of the TodT response regulator to its multiple recognition sites at the tod pathway operon promoter. J. Mol. Biol. 376: 325-337.
371. Lee KPK, Dey M, Neculai D, Cao C, Dever TE, Sicheri F. 2008. Structure of the dual enzyme Ire1 reveals the basis for catalysis and regulation in nonconventional RNA splicing. Cell 132: 89-100.
372. Liu C-C, Richard AJ, Datta K, LiCata VJ. 2008. Prevalence of temperature-dependent heat capacity changes in protein-DNA interactions. Biophys. J. 94: 3258-3265.
373. Lowe J, Ellonen A, Allen MD, Atkinson C, Sherratt DJ, Grainge I. 2008. Molecular mechanism of sequence-directed DNA loading and translocation by FtsK. Mol. Cell. 31: 498-509.
374. Moretti R, Ansari AZ. 2008. Expanding the specificity of DNA targeting by harnessing cooperative assembly. Biochimie 90: 1015-1025.
375. Ramprakash J, Schwarz FP. 2008. Energetic contributions to the initiation of transcription in E. coli. Biophys. Chem. 138: 91-98.
376. Seldeen KL, McDonald CB, Deegan BJ, Farooq A. 2008. Evidence that the bZIP domains of the Jun transcription factor bind to DNA as monomers prior to folding and homodimerization. Arch. Biochem. Biophys. 480: 75-84.
377. Seldeen KL, McDonald CB, Deegan BJ, Farooq A. 2008. Coupling of folding and DNA-binding in the bZIP domains of Jun-Fos heterodimeric transcription factor. Arch. Biochem. Biophys. 473: 48-60.
378. Sidote DJ, Barbieri CM, Wu T, Stock AM. 2008. Structure of the staphylococcus aureus AgrA LytTR domain bound to DNA reveals a beta fold with an unusual mode of binding. Structure 16: 727-735.
379. Wong CJ, Lohman TM. 2008. Kinetic control of Mg2+-dependent melting of duplex DNA ends by Escherichia coli RecBC. J. Mol. Biol. 378: 761-777.
380. Wu Z, Jia X, de la Cruz L, Su XC, Marzolf B, Troisch P, Zak D, Hamilton A, Whittle B, Yu D, Sheahan D, Bertram E, Aderem A, Otting G, Goodnow CC, Hoyne GF. 2008. Memory T cell RNA rearrangement programmed by heterogeneous nuclear ribonucleoprotein hnRNPLL. Immunity 29: 863-875.
381. Recht MI, Ryder SP, Williamson JR. 2008. Monitoring assembly of ribonucleoprotein complexes by isothermal titration calorimetry. Methods Mol. Biol. 488: 117-127.
382. Lacal J, Guazzaroni M-E, Gutiérrez-del-Arroyo P, Busch A, Vélez M, Krell T, Ramos JL. 2008. Two levels of cooperativeness in the binding of TodT to the tod operon promoter. J. Mol. Biol. 384: 1037-1047.
383. Dragan AI, Carrillo R, Gerasimova TI, Privalov PL. 2008. Assembling the human IFN-[beta] enhanceosome in solution. J. Mol. Biol. 384: 335-348.
384. Koh J, Saecker RM, Record MT Jr. 2008. DNA binding mode transitions of Escherichia coli HU[alpha][beta]: evidence for formation of a bent DNA-Protein complex on intact, linear duplex DNA. J. Mol. Biol. 383: 324-346.
385. Vander Meulen KA, Saecker RM, Record MT Jr. 2008. Formation of a wrapped DNA-protein interface: experimental characterization and analysis of the large contributions of ions and water to the thermodynamics of binding IHF to H' DNA. J. Mol. Biol. 377: 9-27.
386. Komazin-Meredith G, Petrella RJ, Santos WL, Filman DJ, Hogle JM, Verdine GL, Karplus M, Coen DM. 2008. The human cytomegalovirus UL44C clamp wraps around DNA. Structure 16: 1214-1225.
387. Jeng WY, Ko TP, Liu CI, Guo RT, Liu CL, Shr HL, Wang AHJ. 2008. Crystal structure of IcaR, a repressor of the TetR family implicated in biofilm formation in Staphylococcus epidermidis. Nucleic Acids Res. 36: 1567-1577.
388. Kono M, Okumura Y, Tanaka M, Nguyen D, Dhanasekaran P, Lund-Katz S, Phillips MC, Saito H. 2008. Conformational flexibility of the N-terminal domain of apolipoprotein A-I bound to spherical lipid particles. Biochemistry 47: 11340-11347.
389. Gottler LM, Bea RD, Shelburne CE, Ramamoorthy A, Marsh ENG. 2008. Using fluorous amino acids to probe the effects of changing hydrophobicity on the physical and biological properties of the beta-hairpin antimicrobial peptide protegrin-1. Biochemistry 47: 9243-9250.
390. Lakshminarayanan R, Vivekanandan S, Samy RP, Banerjee Y, Chi-Jin EO, Teo KW, Jois SDS, Kini RM, Valiyaveettil S. 2008. Structure, self-assembly, and dual role of a beta-defensin-like peptide from the Chinese soft-shelled turtle eggshell matrix. J. Am. Chem. Soc. 130: 4660-4668.
391. Gottler LM, Lee HY, Shelburne CE, Ramamoorthy A, Marsh ENG. 2008. Using fluorous amino acids to modulate the biological activity of an antimicrobial peptide. Chembiochem 9: 370-373.
392. Klocek G, Seelig J. 2008. Melittin interaction with sulfated cell surface sugars. Biochemistry 47: 2841-2849.
393. Bose HS, Whittal RM, Ran Y, Bose M, Baker BY, Miller WL. 2008. StAR-like activity and molten globule Behavior of StARD6, a male germ-line protein. Biochemistry 47: 2277-2288.
394. Meier M, Seelig J. 2008. Length dependence of the coil reversible arrow beta-sheet transition in a membrane environment. J. Am. Chem. Soc. 130: 1017-1024.
395. Basova LV, Tiktopulo EI, Kutyshenko VP, Mauk AG, Bychkova VE. 2008. Phospholipid membranes affect tertiary structure of the soluble cytochrome b5 heme-binding domain. Biochim. Biophys. Acta Biomembr. 1778: 1015-1026.
396. Bastos M, Bai G, Gomes P, Andreu D, Goormaghtigh E, Prieto M. 2008. Energetics and partition of two cecropin-melittin hybrid peptides to model membranes of different composition. Biophys. J. 94: 2128-2141.
397. Bhunia A, Chua GL, Domadia PN, Warshakoon H, Cromer JR, David SA, Bhattacharjya S. 2008. Interactions of a designed peptide with lipopolysaccharide: bound conformation and anti-endotoxic activity. Biochem. Biophys. Res. Commun. 369: 853-857.
398. Black SL, Stanley WA, Filipp FV, Bhairo M, Verma A, Wichmann O, Sattler M, Wilmanns M, Schultz C. 2008. Probing lipid- and drug-binding domains with fluorescent dyes. Bioorg. Med. Chem. 16: 1162-1173.
399. Bouvrais H, Méléard P, Pott T, Jensen KJ, Brask J, Ipsen JH. 2008. Softening of POPC membranes bymagainin. Biophys. Chem. 137: 7-12.
400. Hung W-C, Chen F-Y, Lee C-C, Sun Y, Lee M-T, Huang HW. 2008. Membrane-thinning effect of curcumin. Biophys. J. 94: 4331-4338.
401. Jelokhani-Niaraki M, Hodges RS, Meissner JE, Hassenstein UE, Wheaton L. 2008. Interaction of gramicidin S and its aromatic amino-acid analog with phospholipid membranes. Biophys. J. 95: 3306-3321.
402. Lassiseraye D, Courtemanche L, Bergeron A, Manjunath P, Lafleur M. 2008. Binding of bovine seminal plasma protein BSP-A1/-A2 to model membranes: lipid specificity and effect of the temperature. Biochim. Biophys. Acta Biomembr. 1778: 502-513.
403. Luo R, Miller Jenkins LM, Randazzo PA, Gruschus J. 2008. Dynamic interaction between Arf GAP and PH domains of ASAP1 in the regulation of GAP activity. Cell. Signal. 20: 1968-1977.
404. Shogomori H, Kobayashi T. 2008. Lysenin: a sphingomyelin specific pore-forming toxin. Biochim. Biophys. Acta 1780: 612-618.
405. Gupta G, Gemma E, Oscarson S, Surolia A. 2008. Defining substrate interactions with calreticulin: an isothermal titration calorimetric study. Glycoconj. J. 25: 797-802.
406. Gregg KJ, Finn R, Abbott DW, Boraston AB. 2008. Divergent modes of glycan recognition by a new family of carbohydrate-binding modules. J. Biol. Chem. 283: 12604-12613.
407. Murthy BN, Sinha S, Surolia A, Indi SS, Jayaraman N. 2008. SPR and ITC determination of the kinetics and the thermodynamics of bivalent versus monovalent sugar ligand-lectin interactions. Glycoconj. J. 25: 313-321.
408. Ohnuma T, Onaga S, Murata K, Taira T, Katoh E. 2008. LysM domains from Pteris ryukyuensis Chitinase-A-a stability study and characterization of the chitin-binding site. J. Biol. Chem. 283: 5178-5187.
409. Blanchard B, Nurisso A, Hollville E, Tétaud C, Wiels J, Pokorná M, Wimmerová M, Varrot A, Imberty A. 2008. Structural basis of the preferential binding for globo-series glycosphingolipids displayed by Pseudomonas aeruginosa Lectin I. Eur. J. Pharm. Biopharm. 383: 837-853.
410. Jiménez M, André S, Barillari C, Romero A, Rognan D, Gabius H-J, Solís D. 2008. Domain versatility in plant AB-toxins: evidence for a local, pH-dependent rearrangement in the 2[gamma] lectin site of the mistletoe lectin by applying ligand derivatives and modelling. FEBS Lett. 582: 2309-2312.
411. Johansson EMV, Crusz SA, Kolomiets E, Buts L, Kadam RU, Cacciarini M, Bartels KM, Diggle SP, Cámara M, Williams P, Loris R, Nativi C, Rosenau F, Jaeger KE, Darbre T, Reymond JL. 2008. Inhibition and dispersion of Pseudomonas aeruginosa biofilms by glycopeptide dendrimers targeting the fucose-specific lectin LecB. Chem. Biol. 15: 1249-1257.
412. Koropatkin NM, Martens EC, Gordon JI, Smith TJ. 2008. Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices. Structure 16: 1105-1115.
413. Matei E, Furey W, Gronenborn AM. 2008. Solution and crystal structures of a sugar binding site mutant of cyanovirin-N: no evidence of domain swapping. Structure 16: 1183-1194.
414. Yan X-X, An X-M, Gui L-L, Liang D-C. 2008. From structure to function: insights into the catalytic substrate specificity and thermostability displayed by Bacillus subtilis mannanase BCman. J. Mol. Biol. 379: 535-544.
415. Casas-Solvas JM, Ortiz-Salmeron E, Garcia-Fuentes L, Vargas-Berenguel A. 2008. Ferrocene-mannose conjugates as electrochemical molecular sensors for concanavalin A lectin. Org. Biomol. Chem. 6: 4230-4235.
416. Phillips RL, Kim IB, Carson BE, Tidbeck B, Bai Y, Lowary TL, Tollbert LM, Bunz UHF. 2008. Sugar-substituted poly(p-phenyleneethynylene)s: sensitivity enhancement toward lectins and bacteria. Macromolecules 41: 7316-7320.
417. Asadi A, Saboury AA, Moosavi-Movahedi AA, Divsalar A, Sarbolouki MN. 2008. Interaction of bovine serum albumin with some novel PEG-containingdiblock copolymers. Int. J. Biol.Macromol.43: 262-270.
418. Phillips RL, Kim IB, Tolbert LM, Bunz UHF. 2008. Fluorescence selfquenching of a mannosylated poly(p-phenyleneethynylene) induced by Concanavalin A. J. Am. Chem. Soc. 130: 6952-6954.
419. Braia M, Porfiri MC, Farruggia B, Picó G, Romanini D. 2008. Complex formation between protein and poly vinyl sulfonate as a strategy of proteins isolation. J. Chromatogr. B 873: 139-143.
420. Pavkov T, Egelseer EM, Tesarz M, Svergun DI, Sleytr UB, KellerW. 2008. The structure and binding behavior of the bacterial cell surface layer protein SbsC. Structure 16: 1226-1237.
421. Zhao JX, Qiao YT, Feng J, Yuan Z. 2008. Preparation and recognition study on the peptides in aqueous media of poly(pyridine derivative- co-acrylamide). Chin. J. Chem. 26: 815-817.
422. Zhao JX, Qiao YT, Feng J, Luo ZF, Yuan Z. 2008. Interaction of copolymer-Zn with polypeptide. Chem. J. Chi. Univ.-Chinese 29: 658-660.
423. Ozen C, Norris AL, Land ML, Tjioe E, Serpersu EH. 2008. Detection of specific solvent rearrangement regions of an enzyme: NMR and ITC studies with aminoglycoside phosphotransferase(3')-IIIa. Biochemistry 47: 40-49.
424. Xie J, Murugesan S, Linhardt RJ, Hari GG, Mary KC, Charles AH. 2008. Physiological, pathophysiological and therapeutic roles of heparin and heparan sulfate. Carbohydrate Chemistry, Biology and Medical Applications. Elsevier: Oxford; 227-251.
425. Vander Meulen KA, Davis JH, Foster TR, Record MT Jr, Butcher SE. 2008. Thermodynamics and folding pathway of tetraloop receptormediated RNA helical packing. J. Mol. Biol. 384: 702-717.
426. Mullice LA, Laye RH, Harding LP, Buurma NJ, Pope SJA. 2008. Rhenium complexes of chromophore-appended dipicolylamine ligands: syntheses, spectroscopic properties, DNA binding and X-ray crystal structure. New J. Chem. 32: 2140-2149.
427. Bhadra K, Maiti M, Kumar GS. 2008. DNA-binding cytotoxic alkaloids: comparative study of the energetics of binding of berberine, palmatine, and coralyne. DNA Cell Biol. 27: 675-685.
428. Adhikari A, Hossain M, Maiti M, Kumar GS. 2008. Energetics of the binding of phototoxic and cytotoxic plant alkaloid sanguinarine to DNA: isothermal titration calorimetric studies. J. Mol. Struct. 889: 54-63.
429. Yin MZ, Ding K, Gropeanu RA, Shen J, Berger R,Weil T, Mullen K. 2008. Dendritic star polymers for efficient DNA binding and stimulusdependent DNA release. Biomacromolecules 9: 3231-3238.
430. Coles DJ, Yang S, Minchin RF, Toth I. 2008. The characterization of a novel dendritic system for gene delivery by isothermal titration calorimetry. Biopolymers 90: 651-654.
431. Prevette LE, Lynch ML, Kizjakina K, Reineke TM. 2008. Correlation of amine number and pDNA binding mechanism for trehalose-based polycations. Langmuir 24: 8090-8101.
432. Arora A, Balasubramanian C, Kumar N, Agrawal S, Ojha RP, Maiti S. 2008. Binding of berberine to human telomeric quadruplex-spectroscopic, calorimetric and molecular modeling studies. FEBS J. 275: 3971-3983.
433. Jadhav V, Maiti S, Dasgupta A, Das PK, Dias RS, Miguel MG, Lindman B. 2008. Effect of the head-group geometry of amino acid-based cationic surfactants on interaction with plasmid DNA. Biomacromolecules 9: 1852-1859.
434. Lin PH, Yen SL, Lin MS, Chang Y, Louis SR, Higuchi A, Chen WY. 2008. Microcalorimetrics studies of the thermodynamics and binding mechanism between L-tyrosinamide and aptamer. J. Phys. Chem. B 112: 6665-6673.
435. Bhadra K, Maiti M, Kumar GS. 2008. Interaction of isoquinoline alkaloid palmatine with deoxyribonucleic acids: binding heterogeneity, and conformational and thermodynamic aspects. Chem. Biodivers. 5: 575-590.
436. Sun T, Zhang Y. 2008. Pentamidine binds to tRNA through nonspecific hydrophobic interactions and inhibits aminoacylation and translation. Nucleic Acids Res. 36: 1654-1664.
437. Utsuno K. 2008. Thermodynamics of DNA condensation caused by Mn2{thorn} binding. Chem. Pharm. Bull. 56: 247-249.
438. Majhi PR, Qi JY, Tang CF, Shafer RH. 2008. Heat capacity changes associated with guanine quadruplex formation: an isothermal titration calorimetry study. Biopolymers 89: 302-309.
439. Hossain M, Giri P, Kumar GS. 2008. DNA intercalation by quinacrine and methylene blue: a comparative binding and thermodynamic characterization study. DNA Cell Biol. 27: 81-90.
440. Huang D, Korolev N, Eom KD, Tam JP, Nordenskiold L. 2008. Design and biophysical characterization of novel polycationic epsilon-peptides for DNA compaction and delivery. Biomacromolecules 9: 321-330.
441. Kaur H, Wengel J, Maiti S. 2008. Thermodynamics of DNA-RNA heteroduplex formation: effects of locked nucleic acid nucleotides incorporated into the DNA strand. Biochemistry 47: 1218-1227.
442. Bhadra K, Maiti M, Kumar GS. 2008. Berberine-DNA complexation: new insights into the cooperative binding and energetic aspects. Biochim. Biophys. Acta 1780: 1054-1061.
443. Buurma NJ, Haq I. 2008. Calorimetric and spectroscopic studies of Hoechst 33258: self-association and binding to non-cognate DNA. J. Mol. Biol. 381: 607-621.
444. Das S, Kumar GS. 2008. Molecular aspects on the interaction of phenosafranine to deoxyribonucleic acid: model for intercalative drug-DNA binding. J. Mol. Struct. 872: 56-63.
445. Giri P, Kumar GS. 2008. Self-structure induction in single stranded poly(A) by small molecules: studies on DNA intercalators, partial intercalators and groove binding molecules. Arch. Biochem. Biophys. 474: 183-192.
446. Giri P, Kumar GS. 2008. Spectroscopic and calorimetric studies on the binding of the phototoxic and cytotoxic plant alkaloid sanguinarine with double helical poly(A). J. Photochem. Photobiol. A 194: 111-121.
447. Ikonen M, Murtomäki L, Kontturi K. 2008. Controlled complexation of plasmid DNA with cationic polymers: effect of surfactant on the complexation and stability of the complexes. Colloids Surf. B 66: 77-83.
448. Islam MM, Suresh Kumar G. 2008. RNA targeting by small molecule alkaloids: studies on the binding of berberine and palmatine to polyribonucleotides and comparison to ethidium. J. Mol. Struct. 875: 382-391.
449. Kasparkova J, Marini V, Bursova V, Brabec V. 2008. Biophysical studies on the stability of DNA intrastrand cross-links of transplatin. Biophys. J. 95: 4361-4371.
450. Lee H-T, Olsen CM, Waters L, Sukup H, Marky LA. 2008. Thermodynamic contributions of the reactions of DNA intramolecular structures with their complementary strands. Biochimie 90: 1052-1063.
451. McKnight RE, Onogul B, Polasani SR, Gannon Ii MK, Detty MR. 2008. Substituent control of DNA binding modes in a series of chalcogenoxanthylium photosensitizers as determined by isothermal titration calorimetry and topoisomerase I DNA unwinding assay. Bioorg. Med. Chem. 16: 10221-10227.
452. Pagano B, Virno A, Mattia CA, Mayol L, Randazzo A, Giancola C. 2008. Targeting DNA quadruplexes with distamycin A and its derivatives: an ITC and NMR study. Biochimie 90: 1224-1232.
453. Pilch DS, Barbieri CM, Rzuczek SG, LaVoie EJ, Rice JE. 2008. Targeting human telomeric G-quadruplex DNA with oxazole-containing macrocyclic compounds. Biochimie 90: 1233-1249.
454. Shaw NN, Arya DP. 2008. Recognition of the unique structure of DNA:RNA hybrids. Biochimie 90: 1026-1039.
455. Sielaff A, Mackay H, Brown T, Lee M. 2008. 2-Aminopurine/cytosine base pair containing oligonucleotides: fluorescence spectroscopy studies on DNA-polyamide binding. Biochem. Biophys. Res.Commun. 369: 630-634.
456. Spillane CB, Dabo MNV, Fletcher NC, Morgan JL, Keene FR, Haq I, Buurma NJ. 2008. The dichotomy in the DNA-binding behaviour of ruthenium(II) complexes bearing benzoxazole and benzothiazole groups. J. Inorg. Biochem. 102: 673-683.
457. Liu Y, Collar CJ, Kumar A, Stephens CE, Boykin DW, Wilson WD. 2008. Heterocyclic diamidine interactions at AT base pairs in the DNA minor groove: effects of heterocycle differences, DNA AT sequence and length. J. Phys. Chem. B 112: 11809-11818.
458. Giri P, Kumar GS. 2008. Binding of protoberberine alkaloid coralyne with double stranded poly(A): a biophysical study. Mol. Biosyst. 4: 341-348.
459. Cao M, Deng M, Wang X-L, Wang Y. 2008. Decompaction of cationic gemini surfactant-induced DNA condensates by beta-cyclodextrin or anionic surfactant. J. Phys. Chem. B 112: 13648-13654.
460. Mackay H, Brown T, Uthe PB, Westrate L, Sielaff A, Jones J, Lajiness JP, Kluza J, O'Hare C, Nguyen B, Davis Z, Bruce C, David WilsonW, Hartley JA, Lee M. 2008. Sequence specific and high affinity recognition of 5'-ACGCGT-3' by rationally designed pyrrole-imidazole H-pin polyamides: thermodynamic and structural studies. Bioorg. Med. Chem. 16: 9145-9153.
461. Bhadra K, Maiti M, Kumar GS. 2008. Thermodynamics of the binding of cytotoxic protoberberine molecule coralyne to deoxyribonucleic acids. Biochim. Biophys. Acta 1780: 298-306.
462. Chekmeneva E, Hunter CA, Packer MJ, Turega SM. 2008. Evidence for partially bound states in cooperative molecular recognition interfaces. J. Am. Chem. Soc. 130: 17718-17725.
463. Rozycka-Roszak B, Misiak P, Jurczak B, Wilk KA. 2008. Aggregation studies of n-alkanoyl-N-methyllactitolamine surfactants. J. Phys. Chem. B 112: 16546-16551.
464. Taubitz J, Luning U. 2008. On the importance of the nature of hydrogen bond donors in multiple hydrogen bond systems. Eur. Org. Chem. 35: 5922-5927.
465. Bao HQ, Li L, Gan LH, Zhang HB. 2008. Interactions between ionic surfactants and polysaccharides in aqueous solutions. Macromolecules 41: 9406-9412.
466. Westh P, Inaba A, Koga Y. 2008. Experimental determination of the third derivative of G.I. Enthalpic interaction. J. Chem. Phys. 129: 211101.
467. Vincil GA, Urbach AR. 2008. Effects of the number and placement of positive charges on viologen-cucurbit[n]uril interactions. Supramol. Chem. 20: 681-687.
468. Ge LL, Guo R, Zhang XH. 2008. Formation and microstructure transition of F127/TX-100 complex. J. Phys. Chem. B 112: 14566-14577.
469. Gabriel GJ, Pool JG, Som A, Dabkowski JM, Coughlin EB, Muthukurnar M, Tew GN. 2008. Interactions between antimicrobial polynorbornenes and phospholipid vesicles monitored by light scattering and microcalorimetry. Langmuir 24: 12489-12495.
470. Shpigelman A, Portnaya I, Ramon O, Livney YD. 2008. Saccharide-structure effects on poly N-isopropylacrylamide phase transition in aqueous media; reflections on protein stability. J. Polym. Sci., Part B: Polym. Phys. 46: 2307-2318.
471. Pederson AMP, Ward EM, Schoonover DV, Slebodnick C, Gibson HW. 2008. High-yielding, regiospecific synthesis of cis(4,4')- Di(carbomethoxybenzo)-30-crown-10, its conversion to a pyridyl cryptand and strong complexation of 2,2'- and 4,4'-bipyridinium derivatives. J. Org. Chem. 73: 9094-9101.
472. Rajgariah P, Urbach AR. 2008. Scope of amino acid recognition by cucurbit[8]uril. J. Inclusion Phenom. Macrocyclic Chem. 62: 251-254.
473. Zhang L, Zhu L. 2008. Photochemically stable fluorescent heteroditopic ligands for zinc ion. J. Org. Chem. 73: 8321-8330.
474. Mata JP, Majhi PR, Yamashita M, Khanal A, Nakashima K, Bahadur P. 2008. Aggregation behavior of pluronic-L64 in presence of sodium dodecyl sulphate in water. J. Dispers. Sci. Technol. 29: 1248-1256.
475. Zalupski PR, Nash KL. 2008. Two-phase calorimetry. I. Studies on the thermodynamics of lanthanide extraction by bis(2-ethylHexyl) phosphoric acid. Solvent Extr. Ion Exch. 26: 514-533.
476. Guo MY, Jiang M, Zhang GZ. 2008. Surface modification of polymeric vesicles via host-guest inclusion complexation. Langmuir 24: 10583-10586.
477. Gross DE, Schmidtchen FP, Antonius W, Gale PA, Lynch VM, Sessler JL. 2008. Cooperative binding of calix[4]pyrrole-anion complexes and alkylammonium cations in halogenated solvents. Chem. Eur. J. 14: 7822-7827.
478. Zorko M, Jerala R. 2008. Alexidine and chlorhexidine bind to lipopolysaccharide and lipoteichoic acid and prevent cell activation by antibiotics. J. Antimicro. Chemother. 62: 730-737.
479. Zea CJ, Camci-Unal G, Pohl NL. 2008. Thermodynamics of binding of divalent magnesium and manganese to uridine phosphates: implications for diabetes-related hypomagnesaemia and carbohydrate biocatalysis. Chem. Central J. 2: 15.
480. Nilsson M, Valente AJM, Olofsson G, Soderman O, Bonini M. 2008. Thermodynamic and kinetic characterization of host-guest association between bolaform surfactants and alpha- and betacyclodextrins. J. Phys. Chem. B. 112: 11310-11316.
481. Wenz G, Strassnig C, Thiele C, Engelke A, Morgenstern B, Hegetschweiler K. 2008. Recognition of ionic guests by ionic beta-cyclodextrin derivatives. Chem. Eur. J. 14: 7202-7211.
482. Zielenkiewicz W, Terekhova IV, Marcinowicz A, Kozbial M, Poznanski J. 2008. Interactions of native and modified cyclodextrins with some B-vitamins-calorimetric and H-1 NMR study. J. Therm. Anal. Calorim. 93: 365-372.
483. Zhang SH, Li N, Zheng LQ, Li XW, Gao YA, Yu L. 2008. Aggregation behavior of pluronic triblock copolymer in 1-butyl-3-methylimidazolium type ionic liquids. J. Phys. Chem. B. 112: 10228-10233.
484. Beck A, Tsamaloukas AD, Jurcevic P, Heerklotz H. 2008. Additive action of two or more solutes on lipid membranes. Langmuir 24: 8833-8840.
485. Biswas K, Varghese N, Rao CNR. 2008. Growth kinetics of nanocrystals and nanorods by employing small-angle X-ray scattering (SAXS) and other techniques. J. Mater. Sci. Technol. 24: 615-627.
486. Jadhav VD, Herdtweck E, Schmidtchen FP. 2008. Addressing association entropy by reconstructing guanidinium anchor groups for anion binding: design, synthesis, and host-guest binding studies in polar and protic solutions. Chem. Eur. J. 14: 6098-6107.
487. Biswas K, Varghese N, Rao CNR. 2008. Growth kinetics of gold nanocrystals: a combined small-angle X-ray scattering and calorimetric study. Small 4: 649-655.
488. Apel-Paz M, Doncel GF, Vanderlick TK. 2008. Surfactants as microbicidal contraceptives: a calorimetric study of partitioning and translocation in model membrane systems. Ind. Eng. Chem. Res. 47: 3554-3561.
489. Jiang LX, Wang K, Deng ML, Wang YL, Huang JB. 2008. Bile salt-induced vesicle-to-micelle transition in catanionic surfactant systems: steric and electrostatic interactions. Langmuir 24: 4600-4606.
490. Vieira EFS, Cestari AR, Airoldi C, Loh W. 2008. Polysaccharide-based hydrogels: preparation, characterization, and drug interaction behaviour. Biomacromolecules 9: 1195-1199.
491. Xu J, Reiserer R, Tellinghuisen J, Wikswo JP, Baudenbacher FJ. 2008. A microfabricated nanocalorimeter: design, characterization, and chemical calibration. Anal. Chem. 80: 2728-2733.
492. Meister A, Drescher S, Mey I, Wahab M, Graf G, Garamus VM, Hause G, Mogel HJ, Janshoff A, Dobner B, Blume A. 2008. Helical nanofibers of self-assembled bipolar phospholipids as template for gold nanoparticles. J. Phys. Chem. B 112: 4506-4511.
493. Pigge FC, Dighe MK, Houtman JCD. 2008. Mono-, bis-, and tris(crown ether)s assembled around 1,3,5-triaroylbenzene scaffolds. J. Org. Chem. 73: 2760-2767.
494. Rak J, Tkadlecovka M, Cigler P, Kral V. 2008. NMR study of complexation of metallacarboranes with cyclodextrins. Chemicke Listy 102: 209-212.
495. Gao Y, Hilfert L, Voigt A, Sundmachert K. 2008. Decrease of droplet size of the reverse microemulsion 1-butyl-3-methylimidazolium tetrafluoroborate/triton X-100/cyclohexane by addition of water. J. Phys. Chem. B. 112: 3711-3719.
496. Lahiri S, Devi PG, Majumder P, Das S, Dasgupta D. 2008. Selfassociation of the anionic form of the DNA-binding anticancer drug mithramycin. J. Phys. Chem. B. 112: 3251-3258.
497. Corbett PT, Sanders JKM, Otto S. 2008. Exploring the relation between amplification and binding in dynamic combinatorial libraries of macrocyclic synthetic receptors in water. Chem. Eur. J. 14: 2153-2166.
498. Welscher YMT, Ten Napel HH, Balague MM, Souza CM, Riezman H, De Kruijff B. Breukink O E. 2008. Natamycin blocks fungal growth by binding specifically to ergosterol without permeabilizing the membrane. J. Biol. Chem. 283: 6393-6401.
499. Jadhav VD, Schmidtchen FP. 2008. A novel synthesis of chiral guanidinium receptors and their use in unfolding the energetics of enantiorecognition of chiral carboxylates. J. Org. Chem. 73: 1077-1087.
500. Niemiec A, Loh W. 2008. Interaction of ethylene oxide-propylene oxide copolymers with ionic surfactants studied by calorimetry: random versus block copolymers. J. Phy. Chem. B 112: 727-733.
501. Xi J, Guo R. 2008. Interactions of puerarin with micelles: pK(a) shifts and thermodynamics. J. Solution Chem. 37: 107-118.
502. Al-Hallak MHDK, Xu Z, Ghaffari F, Löbenberg R. 2008. The effect of compression forces on the stability of dibasic calcium phosphate dihydrate tablets in the presence of glutamic acid hydrochloride monitored by isothermal calorimetry. Thermochim. Acta 467: 86-90.
503. Bai G, Gonçalves C, Gama FM, Bastos M. 2008. Self-aggregation of hydrophobically modified dextrin and their interaction with surfactant. Thermochim. Acta 467: 54-62.
504. Bai G, Lopes A, Bastos M. 2008. Thermodynamics of micellization of alkylimidazolium surfactants in aqueous solution. J. Chem. Thermodyn. 40: 1509-1516.
505. Bao H, Li L, Zhang H. 2008. Influence of cetyltrimethylammonium bromide on physicochemical properties and microstructures of chitosan-TPP nanoparticles in aqueous solutions. J. Colloid Interface Sci. 328: 270-277.
506. Bénard P, Garrault S, Nonat A, Cau-dit-Coumes C. 2008. Influence of orthophosphate ions on the dissolution of tricalcium silicate. Cem. Concr. Res. 38: 1137-1141.
507. Boonsongrit Y, Mueller BW, Mitrevej A. 2008. Characterization of drug-chitosan interaction by 1H NMR, FTIR and isothermal titration calorimetry. Eur. J. Pharm. Biopharm. 69: 388-395.
508. Braga VS, Barros ICL, Garcia FAC, Dias SCL, Dias JA. 2008. Esterification of acetic acid with alcohols using supported niobium pentoxide on silica-alumina catalysts. Catal. Today 133-135: 106-112.
509. Cai P, Huang Q, Li M, Liang W. 2008. Binding and degradation of DNA on montmorillonite coated by hydroxyl aluminum species. Colloids Surf. B 62: 299-306.
510. Epand RF, Mowery BP, Lee SE, Stahl SS, Lehrer RI, Gellman SH, Epand RM. 2008. Dual mechanism of bacterial lethality for a cationic sequence-random copolymer that mimics host-defense antimicrobial peptides. J. Mol. Biol. 379: 38-50.
511. Feng X, Leduc M, Pelton R. 2008. Polyelectrolyte complex characterization with isothermal titration calorimetry and colloid titration. Colloids Surf. A 317: 535-542.
512. Goñi FM, Alonso A, Bagatolli LA, Brown RE, Marsh D, Prieto M, Thewalt JL. 2008. Phase diagrams of lipid mixtures relevant to the study of membrane rafts. Biochim. Biophys. Acta 1781: 665-684.
513. Gué A-M, Lattes A, Laurent E, Mauzac M, Mingotaud A-F. 2008. Characterization of recognition sites for diethyl 4-nitrobenzylphosphonate, an organophosphate pesticide analogue. Anal. Chim. Acta 614: 63-70.
514. Guerra DL, Airoldi C, Viana RR. 2008. Performance of modified montmorillonite clay in mercury adsorption process and thermodynamic studies. Inorg. Chem. Commun. 11: 20-23.
515. He Y, Shen X, Gao H, He Y. 2008. Spectral and photophysical studies on the inclusion complexation between Triton X-100 and [beta]-cyclodextrin: a competitive method using a substituted 3H-indole probe. J. Photochem. Photobiol. A 193: 178-186.
516. Huang X, Han Y, Wang Y, Cao M, Wang Y. 2008. Aggregation properties of cationic gemini surfactants with dihydroxyethylamino headgroups in aqueous solution. Colloids Surf. A 325: 26-32.
517. Koivukorpi J, Kolehmainen E. 2008. Design, synthesis and spectral studies of novel bile acid-arene conjugates: trans to cis isomerization of azobenzene core controlled by bile acid hydrophobicity. J. Mol. Struct. 875: 63-67.
518. Liu Y, Zhang Q, Guo D-S, Zhuang R-J, Wang L-H. 2008. Thermodynamics of complexes between nucleobase-modified [beta]-cyclodextrins and bile salts. Thermochim. Acta 470: 108-112.
519. Lynch I, Dawson KA. 2008. Protein-nanoparticle interactions. Nano Today 3: 40-47.
520. Martos V, Castreño P, Valero J, de Mendoza J. 2008. Binding to protein surfaces by supramolecular multivalent scaffolds. Curr. Opin. Chem. Biol. 12: 698-706.
521. Nizri G, Lagerge S, Kamyshny A, Major DT, Magdassi S. 2008. Polymer-surfactant interactions: binding mechanism of sodium dodecyl sulfate to poly(diallyldimethylammonium chloride). J. Colloid Interface Sci. 320: 74-81.
522. Ohta A, Toda K, Morimoto Y, Asakawa T, Miyagishi S. 2008. Effect of the side chain of N-acyl amino acid surfactants on micelle formation: an isothermal titration calorimetry study. Colloids Surf. A 317: 316-322.
523. Onesippe C, Lagerge S. 2008. Study of the complex formation between sodium dodecyl sulfate and hydrophobically modified chitosan. Carbohydr. Polym. 74: 648-658.
524. Parker KM, Stalcup AM. 2008. Affinity capillary electrophoresis and isothermal titration calorimetry for the determination of fatty acid binding with beta-cyclodextrin. J. Chromatogr. A 1204: 171-182.
525. Rezaei Behbehani G, Waghorne WE. 2008. A high-performance theory for thermodynamic study of solvation in mixed solvents. Thermochim. Acta 478: 1-5.
526. Rózycka-Roszak B, Misiak P, Wozniak E, Mozrzymas A, Dega-Szafran Z. 2008. Calorimetric and molecular modeling studies of N-alkoxycarbonylmethyl-N-alkyl-piperidinium chlorides. Colloids Surf. A 318: 301-306.
527. Ruiz J-C, Alvarez-Lorenzo C, Taboada P, Burillo G, Bucio E, De Prijck K, Nelis HJ, Coenye T, Concheiro A. 2008. Polypropylene grafted withsmart polymers (PNIPAAm/PAAc) for loading and controlled release of vancomycin. Eur. J. Pharm. Biopharm. 70: 467-477.
528. Sletmoen M, Maurstad G, Stokke BT. 2008. Potentials of bionanotechnology in the study and manufacturing of self-assembled biopolymer complexes and gels. Food Hydrocolloids 22: 2-11.
529. Varghese N, Vivekchand SRC, Govindaraj A, Rao CNR. 2008. A calorimetric investigation of the assembly of gold nanorods to form necklaces. Chem. Phys. Lett. 450: 340-344.
530. Yang J, Zhao J, Fang Y. 2008. Calorimetric studies of the interaction between sodium alginate and sodium dodecyl sulfate in dilute solutions at different pH values. Carbohydr. Res. 343: 719-725.
531. Barbosa ME, Bouteiller L, Cammas-Marion S, Montembault V, Fontaine L, Ponchel G. 2008. Synthesis and ITC characterization of novel nanoparticles constituted by poly(gamma-benzyl L-glutamate)- beta-cyclodextrin. J. Mol. Recognit. 21: 169-178.
532. Liu Y, Cao R, Chen Y, He JY. 2008. Effect of beta-cyclodextrin charge type on the molecular recognition thermodynamics of reactions with (ferrocenylmethyl)dimethylaminium derivatives. J Phys. Chem. B 112: 1445-1450.
533. te Welscher YM, ten Napel HH, Balague MM, Souza CM, Riezman H, de Kruijff B, Breukink E. 2008. Natamycin blocks fungal growth by binding specifically to ergosterol without permeabilizing the membrane. J. Biol. Chem. 283: 6393-6401.
534. Harrison JJ, Turner RJ, Joo DA, Stan MA, Chan CS, Allan ND, Vrionis HA, Olson ME, Ceri H. 2008. Copper and quaternary ammonium cations exert synergistic bactericidal and antibiofilm activity againstPseudomonas aeruginosa. Antimicrob. Agents Chemother. 52: 2870-2881.
535. Tellinghuisen J, Correia JJ, Detrich HW III. 2008. Stupid statistics! Methods in Cell Biology. Academic Press: Maryland Heights; 737, 739-780.
536. de Sousa FB, Denadai AML, Lula IS, Lopes JF, Dos Santos HF, De Almeida WB, Sinisterra RD. 2008. Supramolecular complex of fluoxetine with [beta]-cyclodextrin: an experimental and theoretical study. Int. J. Pharm. 353: 160-169.
537. Bellot M, Bouteiller L. 2008. Thermodynamic description of bis-urea self-assembly: competition between two supramolecular polymers. Langmuir 24: 14176-14182.
538. Cuypers R, Burghoff B, Marcelis ATM, Sudholter EJR, de Haan AB, Zuilhof H. 2008. Complexation of phenols and thiophenol by phosphine oxides and phosphates. Extraction, isothermal titration calorimetry, and ab initio calculations. J. Phys. Chem. A 112: 11714-11723.
539. Matskevich N, Wolf T. 2008. Synthesis and physico-chemical properties of phase-pure ceramic LuBa2Cu3O7-[delta]. Thermochim. Acta 467: 113-116.
540. Rao L, Tian G. 2008. Thermodynamic study of the complexation of uranium(VI) with nitrate at variable temperatures. J. Chem. Thermodyn. 40: 1001-1006.
541. Páhi AB, Varga D, Király Z, Mastalir Á. 2008. Thermodynamics of micelle formation of the ephedrine-based chiral cationic surfactant DMEB in water, and the intercalation of DMEB in montmorillonite. Colloids Surf. A 319: 77-83.