Molecular identification of weedy Sporobolus species by PCR-RFLP

Weed Research

Volumn 50, Issue 5, 2010, Pages 383-387

  Shrestha, S ^a,b   Graham, G C ^a,c   Loch, D S ^a   Adkins, S W ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b NEPAL ACADEMY OF SCIENCE AND TECHNOLOGY   (Nepal)

^c QUEENSLAND HEALTH   (Australia)

Author keywords

Diagnostics; Giant rats tail grasses; Internal transcribed spacers (ITS); ITS sequences; Polymerase chain reaction; Ribosomal DNA

Indexed keywords

ACCURACY ASSESSMENT; CERTIFICATION; COMMERCIAL SPECIES; ENZYME; GENETIC ANALYSIS; GRASS; IDENTIFICATION METHOD; MOLECULAR ANALYSIS; MORPHOLOGY; POLYMERASE CHAIN REACTION; WEED;

AUSTRALIA;

CRICETOMYS EMINI; POACEAE; RATTUS; SPOROBOLUS;

EID: 77956280408     PISSN: 00431737     EISSN: 13653180     Source Type: Journal    
DOI: 10.1111/j.1365-3180.2010.00806.x     Document Type: Article

References (17)

1. Giant rats tail grass Sporobolus pyramidalis and S. natalensis declared. 1997, Anonymous, Queensland Department of Primary Industries. Pest Facts Sheet. Produced by Land Protection Sub Program, Queensland. Published by Queensland Department of Primary Industries (QDPI
2. Betts J, Fenton G, Moore K. Giant Parramatta Grass Control. 1990, Agnote, NSW Agriculture and Fisheries, NSW
3. A DNA Barcode for land plants. PNAS 2009, 106:12794-12797. http://www.pnas.org/cgi/doi, Cbol Working Group, ()
4. Cummings J, Wright J, Penetta FD, Loch DS. An assessment of the pest status of giant rats tail grass in Queensland, Presentation to the Rural Lands Protection board meeting, Queensland, March 8-9, 1994. 1994
5. Edwards K, Johnstone C, Thompson C. A simple and rapid method for preparation of plant genomic DNA for PCR analysis. Nucleic Acids Research 1991, 19:1349.
6. Granchi L, Bosco M, Messini A, Vincenzini M. Rapid detection and quantification of yeast species during spontaneous wine fermentation by PCR-RFLP analysis of the rDNA ITS region. Journal of Applied Microbiology 1999, 87:949-956.
7. Hartley JL, Bowen H. PEG precipitation for selective removal of small DNA fragments. Focus 1996, 18:27.
8. Li X, Ding X, Chu B. Molecular authentication of Alisma orientale by PCR-RFLP and ARMS. Planta Medica 2007, 73:67-70.
9. Palapala VA, Aimi T, Inatomi S, Morinnaga T. ITS-PCR-RFLP method for distinguishing commercial cultivars of edible mushroom, Flammulina velutipes. Journal of Food Science 2002, 67:2486-2490.
10. Ristaino JB, Madritch M, Trout CL, Parra G. PCR amplification of ribosomal DNA for species identification in the plant pathogen genus Phytophthora. Applied and Environmental Microbiology 1998, 64:948-954.
11. Shrestha S, Adkins SW, Graham GC, Loch DS. Phylogeny of the Sporobolus indicus complex based on internal transcribed spacers (ITS) sequences. Australian Systematic Botany 2003, 16:165-176.
12. Shrestha S, Adkins SW, Graham GC, Loch DS. An identification tool for the Australian weedy Sporobolus species based on random amplified polymorphic DNA (RAPD) profiles. Australian Journal of Agricultural Research 2005, 56:157-167.
13. Simon BK. Key to Australian Grasses. 1993, Published by Queensland Department of Primary Industries. Information Series. Q189019, pp, Queensland, Brisbane, Australia
14. Simon BK. Taxonomy of the Sporobolus indicus complex. 1999, 41-47. In: Proceedings of the Workshop 'Weedy Sporobolus Grasses, Research Update'. Gympie, 19th November, 1999, pp, Published by Queensland Department of Primary Industries (QDPI, Queensland, Brisbane, Australia
15. Simon BK, Jacobs SWL. Revision of the genus Sporobolus (Poaceae, Chloridoideae) in Australia. Australian Systematic Botany 1999, 12:375-448.
16. Wetzel DK, Horak MJ, Skinner DZ. Use of PCR-based molecular markers to identify weedy Amaranthus species. Weed Science 1999, 47:518-523.
17. Yasuda K, Yano A, Nakayama Y, Yamaguchi H. Molecular identification of Echinochloa oryzicola Vasing. and E. crus-galli (L.) Beauv. using a polymerase chain reaction-restriction fragment length polymorphism technique. Weed Biology and Management 2002, 2:11-17.