Y-chromosome evidence for common ancestry of three Chinese populations with a high risk of esophageal cancer

PLoS ONE

Volumn 5, Issue 6, 2010, Pages

  Huang, Haihua ^a,b   Su, Min ^a   Li, Xiaoyun ^a   Li, Hui ^c,d   Tian, Dongping ^a   Gao, Yuxia ^a   Guo, Yubai ^a  

^a SHANTOU UNIVERSITY MEDICAL COLLEGE   (China)

^b THE SECOND AFFILIATED HOSPITAL OF SHANTOU UNIVERSITY MEDICAL COLLEGE   (China)

^c FUDAN UNIVERSITY   (China)

^d YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; CANCER INCIDENCE; CANCER RISK; CHINA; CHINESE; CLUSTER ANALYSIS; CONTROLLED STUDY; CORRELATION ANALYSIS; ESOPHAGUS CANCER; GENE LOCUS; GENETIC SUSCEPTIBILITY; GENOTYPE; HAPLOTYPE; HIGH RISK POPULATION; HISTORY; HUMAN; HUMAN TISSUE; HYPOTHESIS; LAST COMMON ANCESTOR; MALE; MARKER GENE; MOLECULAR PHYLOGENY; PHYLOGENY; POPULATION MIGRATION; PRINCIPAL COMPONENT ANALYSIS; SHORT TANDEM REPEAT; SINGLE NUCLEOTIDE POLYMORPHISM; Y CHROMOSOME; ESOPHAGUS TUMOR; ETHNOLOGY; GENETIC PREDISPOSITION; GENETICS;

MICROSATELLITE DNA;

CHINA; CHROMOSOMES, HUMAN, Y; CLUSTER ANALYSIS; ESOPHAGEAL NEOPLASMS; GENETIC PREDISPOSITION TO DISEASE; HAPLOTYPES; HUMANS; MICROSATELLITE REPEATS; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE;

EID: 77956203113     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0011118     Document Type: Article

References (42)

1. Su B, Xiao JH, Underhill P, Deka R, Zhang WL, et al. (1999) Y-chromosome evidence for a northward migration of modern humans in Eastern Asia during the last ice age. Am J Hum Genet 65: 1718-1724.
2. Parkin DM, Bray F, Ferlay J, Pisani P (2001) Estimating the world cancer burden: Globocan 2000. Int J Cancer 94(2): 153-156.
3. Stewart BW, Kleihues P (2003) World cancer report. Lyon (France): International Agency for Research on Cancer.
4. Roohullah, Khursheed MA, Muhanmmad AS, Zainullah K, Haider SW, et al. (2005) An alarming occurrence of Esophageal cancer in Balochistan. Pakistan J Med Res 44(2): 101-104.
5. Su M, Liu M, Tian DP, Li XY, Yang HL, et al. (2007) Temporal trends of esophageal cancer during 1995-2004 in Nanao Island, an extremely high-risk area in China. Eur J Epidemiol 22(1): 43-48.
6. Chen WS, Yang HL, Cai WS, Qin JW, Zhang C, et al. (1996) Epidemiologic features of esophagus cancer in Nanao county Guangdong province from 1987 to 1992. Chin J Cancer 15(4): 274-276.
7. Peng XE, Yang XH, Shi XS, Ma HB, Hu QB (2003) Study on geographic characteristics of esophageal cancer in Fujian province. Chin J Prev Contr Chron Non-commun Dis 11(5): 212-214.
8. Zou XN, Lu FZ, Zhang SW, et al. (2002) Characteristics of esophageal cancer mortality in China, 1990-1992. Bull Chin Cancer 11(8): 446-449.
9. Su M, Li XY, Tian DP, Wu MY, Wu XY, et al. (2004) Clinicopathologic analysis of esophageal and cardiac cancers and survey of molecular expression on tissue microarrays in Chaoshan littoral of China. World J Gastroenterol 10(15): 2163-2167.
10. Huang ZF (2000) Ancestor of Chaoshan. Shantou: Shantou University Press. pp 1-30.
11. Huang T (1999) Origin and development of Chanshan culture. Guangzhou: Guangdong Higher Education Press. pp 1-17.
12. Su M, Lu M, Li XY, Zhang GH, Yang HL (2005) A genetic epidemiological study on esophageal cancer of Nanao island in Chao-shan region [A]. Proceedings of the first assembly international academic conference of esophagus carcinoma [C]. Zhengzhou, China 149-154. Published by the Anticancer Institution in Henan province.
13. Hu N, Dawsey SM, Wu M, Bonney GE, He LJ, et al. (1992) Familial aggregation of oesophageal cancer in Yangcheng County, Shanxi Province, China. Int J Epidemiol 21(5): 877-882.
14. Chang-Claude J, Becher H, Blettner M, Qiu S, Yang G, et al. (1997) Familial aggregation of oesophageal cancer in a high incidence area in China. Int J Epidemiol 26(6): 1159-1165.
15. Jin L, Su B (2000) Natives or immigrants: modern human origin in East Asia. Nat Rev Genet 1(2): 126-133.
16. Wen B (2004) Y-chromosome and mtDNA polymorphism and genetic structure of East Asian. Doctoral dissertation of Fudan University. pp 1-20.
17. Ke YH, Su B, Xiao JH, Chen H, Huang W, et al. (2001) Y-chromosome haplotype distribution in Han Chinese populations and modern human origin in East Asians. Sci in China (Series C) 44(3): 225-232.
18. Li H, Pan WY, Wen B, Yang NN, Jin JZ, et al. (2003) Origin of Hakka and Kakkanese: a genetic analysis. Acta Genetica Sinica 30(9): 873-880.
19. Yu JK, Sun H, Shi L, Shi L, Qian YP, et al. (2006) A polymorphism analysis of 17 biallelic marker on Y chromosome in 5 Chinese populations. Chin J Appl Environ Biol 12(2): 247-250.
20. Wu WW, Zheng XT, Pan LP, Hao HL, Fu T (2005) A study of polymorphisms of 16 Y-STR loci in Han population in Zhejiang. Forensic Sci Technol 5: 11-17.
21. Feng CJ, Xiang ZD, Shen CB (2005) Polymorphisms of twelve Y-chromosome STR loci in Han population in Henan. Forensic Sci Technol 3: 23-28.
22. Ba GJ, Lin ZQ, Li S (2007) Polymorphisms of eleven Y-chromosome STR loci in Han population in Northeast of China. J Forensic Med 23(3): 206-209.
23. Kuang JZ, Zhu W, Nie TG, Liu Y, Liu MN, et al. (2005) Polymorphisms of 12 Y-STR loci in Han population in Tianjin. Forensic Sci Technol 1: 19-26.
24. Chen SQ, Chen HJ, Zeng XG, Li Q, Zhu ZL, et al. (2005) Polymorphism analysis of seven Y-STR loci in Han population in Hunan. Chin J Forensic Med 20(3): 174-176.
25. Zhao JM, Yuan DY, Kang LL, Liu K, Li SB (2007) Genetic polymorphisms of 14 Y-chromosomal short tandem repeat loci and haplotypes in Tibetan. Chin J Med Genet 24(1): 94-96.
26. Si MQ (2007) History as a Mirror. Chinese Publishing House 1: 120-121.
27. Xie CG (2003) The transplantation and spreading of Min-nan Culture of Song dynasty in Chao-shan areas. J Hanshan Teachers College (China) 24: 1-9.
28. Chen ZH (2001) Outline of Chaoshan culture. Guangzhou: Guangdong People's Publishing House, China. pp 40-45.
29. Fei XT (1999) The Pattern of Diversity in Unity of the Chinese Nation. Beijing: Central University for Nationalities Press. pp 4-20.
30. Ge JX, Wu SD, Cao SJ (1997) The migration history of China. Fuzhou: Fujian People's Publishing House, China. pp 7-45.
31. Sambrook J, Fritsch EF, Maniantis T (Translated by Jin Dong-Yan, Li Meng-feng). (1996) Molecular Cloning: A Laboratory Manual. 2 nd ed. Beijing: Science Press, 463-469 (in Chinese).
32. Underhill PA, Jin L, Lin AA, Mehdi SQ, Jenkins T, et al. (1997) Detection of numerous Y chromosome biallelic polymorphisms by denaturing high-performance liquid chromatography. Genome Research 7: 996-1005.
33. Wen B, Shi H, Ren L, Xi HF, Li KY, et al. (2003) The origin of Mosuo people as revealed by mtDNA and Y chromosome variation. Sci in China (Series C) 33: 375-384.
34. The Y chromosome Consortium (2002) A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Res 12(2): 339-348.
35. Li B, Hu SP, Liu JW (2006) Polymorphisms of 12 Y-STR loci in Han population in Minnan area. Chin J Forensic Med 21(3): 172-174.
36. Wang DH, Chen L, Hou QT, Yang YL (2006) Polymorphisms of 11 Y-STR loci in Han population in Anhui. Chin J Forensic Med 21(5): 302-303.
37. Zhang XH, Wu WW, Tang JX, Qian GL, Zhang XM (2006) Polymorphisms of Eleven Y-chromosome STR loci and For ensic Application in Yunnan Han Population. J Forensic Med 22(3): 210-213.
38. Liu C, Chen L, Chen XH, Liu CH, Wang HJ (2007) Polymorphism of 12 Y-STR loci in Guangzhou Han population and its application in forensic medicine. J South Med Univ 27(5): 599-601.
39. Yang J, Liu YC, Tang H, Huo ZY (2002) Polymorphisms of Y-chromosome STR loci in Beijing population. Chin J Forensic Med 17(6): 346-347.
40. Yu L, Huang XQ, Shi L, Shi L, Yu JK, et al. (2005) Gene frequencies and haplotypes of nine Y-short tandem repeat loci in four minority populations of China. Chin J Med Genet 22(3): 337-340.
41. He Y, Shan KR, Xie Y, Xiu J, Wu CX, et al. (2006) Polymorphism analysis of seven Y-STR loci in Shui population in Guizhou, China. Hereditas (Beijing) 28(12): 1495-1499.
42. Yang XX, Yang ZL, Shi H, Gao L, Dong YL, et al. (2005) Study of Y-STR genetic polymorphism for Naxi nationality. J Dali University 4(3): 24-26.