Crystal and solution structure of the C-terminal part of the Methanocaldococcus jannaschii A1AO ATP synthase subunit e revealed by X-ray diffraction and small-angle X-ray scattering

Journal of Bioenergetics and Biomembranes

Volumn 42, Issue 4, 2010, Pages 311-320

  Balakrishna, Asha Manikkoth ^a   Manimekalai, Malathy Sony Subramanian ^a   Hunke, Cornelia ^a   Gayen, Shovanlal ^a   Rössle, Manfred ^b   Jeyakanthan, Jeyaraman ^c   Grüber, Gerhard ^a  

^a NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

^b EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^c NATIONAL SYNCHROTRON RADIATION RESEARCH CENTER   (Taiwan)

Author keywords

A1A O ATP synthase; Archaea; Crystallization; Small angle X ray scattering; Subunit E

Indexed keywords

PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE;

ALPHA HELIX; ARTICLE; CARBOXY TERMINAL SEQUENCE; CRYSTAL STRUCTURE; CRYSTALLIZATION; METHANOCOCCUS JANNASCHII; MOLECULE; NONHUMAN; PROTEIN PURIFICATION; PYROCOCCUS HORIKOSHII; SMALL ANGLE SCATTERING; X RAY DIFFRACTION;

AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; ATP SYNTHETASE COMPLEXES; CRYSTALLOGRAPHY, X-RAY; HUMANS; MAGNETIC RESONANCE SPECTROSCOPY; METHANOCOCCACEAE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; PROTEIN SUBUNITS; SCATTERING, SMALL ANGLE; SOLUTIONS; X-RAY DIFFRACTION;

METHANOCALDOCOCCUS JANNASCHII; PYROCOCCUS HORIKOSHII;

EID: 77956057634     PISSN: 0145479X     EISSN: 15736881     Source Type: Journal    
DOI: 10.1007/s10863-010-9298-3     Document Type: Article

References (41)

1. RA Bernal D Stock 2004 Structure 12 1789 1798 10.1016/j.str.2004.07.017 1:CAS:528:DC%2BD2cXotFCkt74%3D
2. G Biuković M Rössle S Gayen Y Mu G Grüber 2007 Biochemistry 46 2070 2078 10.1021/bi062123n
3. G Biuković S Gayen K Pervushin G Grüber 2009 Biophys J 97 286 294 10.1016/j.bpj.2009.04.026
4. CJ Boulin R Kempf MHJ Koch SM McLaughlin 1986 Nucl Instrum Methods A249 399 407 1:CAS:528:DyaL28Xlt1als7c%3D
5. Y Chaban T Ubbink-Kok W Keegstra JS Lolkema EJ Boekema 2002 EMBO Rep 3 1 10 10.1093/embo-reports/kvf196
6. Collaborative Computational Project, Number 4 1994 Acta Crystallogr D50 760 763
7. Ü Coskun G Grüber MHJ Koch J Godovac-Zimmermann T Lemker V Müller 2002 J Biol Chem 277 17327 17333 10.1074/jbc.M110407200 1:CAS:528:DC%2BD38XjslWgsLc%3D
8. Ü Coskun YL Chaban A Lingl V Müller W Keegstra EJ Boekema G Grüber 2004a J Biol Chem 279 38644 38648 10.1074/jbc.M406196200 1:CAS:528:DC%2BD2cXnt1OqurY%3D
9. Ü Coskun M Radermacher V Müller T Ruiz G Grüber 2004b J Biol Chem 279 22759 22764 10.1074/jbc.M313741200 1:CAS:528:DC%2BD2cXjvF2ru74%3D
10. K Cowtan 1994 Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography 31 34 38
11. DeLano WL (2002) The PyMol molecular graphics system. DeLano Scientific, Palo Alto
12. P Emsley K Cowtan 2004 Acta Crystallogr D60 2126 2132 1:CAS:528:DC%2BD2cXhtVars73P
13. S Gayen G Grüber 2010 FEBS Lett 584 713 718 10.1016/j.febslet.2009. 12.024 1:CAS:528:DC%2BC3cXhs1yhtr0%3D
14. S Gayen AM Balakrishna G Biuković W Yulei C Hunke G Grüber 2008 FEBS J 275 1803 1812 10.1111/j.1742-4658.2008.06338.x 1:CAS:528: DC%2BD1cXlt1WgsL0%3D
15. S Gayen AM Balakrishna G Grüber 2009 J Bioenerg Biomembr 41 343 348 10.1007/s10863-009-9237-3 1:CAS:528:DC%2BD1MXht1Cmtb%2FF
16. G Grüber V Marshansky 2008 BioEssays 30 1096 1109 10.1002/bies.20827
17. G Grüber DI Svergun Ü Coskun T Lemker MHJ Koch H Schägger V Müller 2001 Biochemistry 40 1890 1896 10.1021/bi002195t
18. G Grüber J Godovac-Zimmermann TA Link Ü Coskun VF Rizzo C Betz S Bailer 2002 Biochem Biophys Res Commun 298 383 391 10.1016/S0006-291X(02) 02468-3
19. Guinier A, Fournet G (1955) Small angle Scattering of X-rays. Wiley, New York
20. E Kish-Trier S Wilkens 2009 J Biol Chem 284 12031 12040 10.1074/jbc.M808962200 1:CAS:528:DC%2BD1MXltVCmtb0%3D
21. E Krissinel K Henrick 2004 Acta Crystallogr D60 2256 2268 1:CAS:528:DC%2BD2cXhtVars7rL
22. A Kumar MSS Manimekalai AM Balakrishna C Hunke S Weigelt N Sewald G Grüber 2009 Proteins 75 807 819 10.1002/prot.22289 1:CAS:528: DC%2BD1MXltleks7w%3D
23. UK Laemmli 1970 Nature 227 680 685 10.1038/227680a0 1:CAS:528: DC%2BD3MXlsFags7s%3D
24. RA Laskowski MW MacArthur DS Moss JM Thornton 1993 J Appl Crystallogr 26 283 291 10.1107/S0021889892009944 1:CAS:528:DyaK3sXit12lurY%3D
25. LK Lee AG Stewart M Donohoe RA Bernal D Stock 2010 Nat Struct Mol Biol 17 373 378 10.1038/nsmb.1761 1:CAS:528:DC%2BC3cXit1SmtL8%3D
26. K Lewalter V Müller 2006 Biochim Biophys Acta 1757 437 455 10.1016/j.bbabio.2006.04.027 1:CAS:528:DC%2BD28Xmsl2jtr4%3D
27. NK Lokanath Y Matsuura C Kuroishi N Takahashi N Kunishima 2007 J Mol Biol 366 933 944 10.1016/j.jmb.2006.11.088 1:CAS:528:DC%2BD2sXhtleiu7Y%3D
28. BW Matthews 1968 J Mol Biol 33 491 497 10.1016/0022-2836(68)90205-2 1:CAS:528:DyaF1cXktVynurw%3D
29. AJ McCoy RW Grosse-Kunstleve PD Adams MD Winn LC Storoni RJ Read 2007 J Appl Crystallogr 40 658 674 10.1107/S0021889807021206 1:CAS:528: DC%2BD2sXnslWqsLk%3D
30. V Müller G Grüber 2003 Cell Mol Life Sci 60 474 494 10.1007/s000180300040
31. GN Murshudov AA Vagin EJ Dodson 1997 Acta Crystallogr D53 240 255 1:CAS:528:DyaK2sXjs1Gnsb4%3D
32. Z Otwinowski W Minor 1997 Meth Enzymol 276 307 326 10.1016/S0076-6879(97) 76066-X 1:CAS:528:DyaK2sXivFehsbw%3D
33. MV Petoukhov DI Svergun 2005 Biophys J 89 1237 1250 10.1529/biophysj.105. 064154 1:CAS:528:DC%2BD2MXnvVSrs7k%3D
34. M Roessle R Klaering U Ristau B Robrahn D Jahn T Gehrmann PV Konarev A Round S Fiedler S Hermes DI Svergun 2007 J Appl Crystallogr 40 190 194 10.1107/S0021889806055506
35. AR Round D Franke S Moritz R Huchler M Fritsche D Malthan R Klaering DI Svergun M Roessle 2008 J Appl Crystallogr 41 913 917 10.1107/S0021889808021018 1:CAS:528:DC%2BD1cXhtFegt7fM
36. EB Saff ABJ Kuijlaars 1997 Math Intell 19 5 11 10.1007/BF03024331
37. I Schäfer SM Bailer MG Düser M Börsch AB Ricardo D Stock G Grüber 2006a J Mol Biol 358 725 740 10.1016/j.jmb.2006.02.057
38. I Schäfer M Rössle G Biuković V Müller G Grüber 2006b J Bioenerg Biomembr 38 83 92 10.1007/s10863-006-9015-4
39. DI Svergun 1993 J Appl Crystallogr 26 258 267 10.1107/S0021889892011828
40. DI Svergun 1999 Biophys J 76 2879 2886 10.1016/S0006-3495(99)77443-6 1:CAS:528:DyaK1MXjs1Cgsbs%3D
41. J Vonck KY Pisa N Morgner B Brutschy V Müller 2009 J Biol Chem 284 10110 10119 10.1074/jbc.M808498200 1:CAS:528:DC%2BD1MXjvFKks70%3D