Cytoplasmic phytochrome action

Plant and Cell Physiology

Volumn 51, Issue 8, 2010, Pages 1248-1254

  Rsler, Jutta ^a   Jaedicke, Katharina ^a   Zeidler, Mathias ^a  

^a JUSTUS LIEBIG UNIVERSITY   (Germany)

Author keywords

Cytoplasmic phytochrome; Higher and lower plants; Localization; Photoreceptor evolution; Signaling

Indexed keywords

PHYTOCHROME;

ARTICLE; CYTOPLASM; LIGHT; METABOLISM; PHOTOTROPISM; PLANT; PLANT PHYSIOLOGY; RADIATION EXPOSURE;

CYTOPLASM; LIGHT; PHOTOTROPISM; PHYTOCHROME; PLANT PHYSIOLOGICAL PHENOMENA; PLANTS;

BACTERIA (MICROORGANISMS); BRYOPHYTA; CYANOBACTERIA; EMBRYOPHYTA; FUNGI;

EID: 77955936933     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcq091     Document Type: Article

References (88)

1. Blumenstein, A., Vienken, K., Tasler, R., Purschwitz, J., Veith, D., Frankenberg-Dinkel, N., et al. (2005) The Aspergillus nidulans phytochrome FphA represses sexual development in red light. Curr. Biol. 15: 1833-1838.
2. Borthwick, H.A., Hendricks, S.B., Parker, M.W., Toole, E.H. and Toole, V.K. (1952) A reversible photoreaction controlling seed germination. Proc. Natl Acad. Sci. USA 38: 662-666.
3. Bowler, C., Neuhaus, G., Yamagata, H. and Chua, N.H. (1994) Cyclic GMP and calcium mediate phytochrome phototransduction. Cell 77: 73-81.
4. Burgess, J. and Linstead, P.J. (1981) Studies on the growth and development of protoplasts of the moss, Physcomitrella patens, and its control by light. Planta 151: 331-338.
5. Chen, M., Schwab, R. and Chory, J. (2003) Characterization of the requirements for localization of phytochrome B to nuclear bodies. Proc. Natl Acad. Sci. USA 100: 14493-14498.
6. Chen, M., Tao, Y., Lim, J., Shaw, A. and Chory, J. (2005) Regulation of phytochrome B nuclear localization through light-dependent unmasking of nuclear-localization signals. Curr. Biol. 15: 637-642.
7. Christie, J.M., Reymond, P., Powell, G.K., Bernasconi, P., Raibekas, A.A., Liscum, E., et al. (1998) Arabidopsis NPH1: a flavoprotein with the properties of a photoreceptor for phototropism. Science 282: 1698-1701.
8. Clough, R.C., Jordan-Beebe, E.T., Lohman, K.N., Marita, J.M., Walker, J.M., Gatz, C., et al. (1999) Sequences within both the Nand C-terminal domains of phytochrome A are required for PFR ubiquitination and degradation. Plant J. 17: 155-167.
9. Coleman, R.A. and Pratt, L.H. (1974) Electron microscopic localization of phytochrome in plants using an indirect antibody-labeling method. J. Histochem. Cytochem. 22: 1039-1047.
10. Cove, D.J., Quatrano, R.S. and Hartmann, E. (1996) The alignment of the axis of asymmetry in regenerating protoplasts of the moss, Ceratodon purpureus, is determined independently of axis polarity. Development 122: 371-379.
11. Cove, D.J., Schild, A., Ashton, N.W. and Hartmann E. (1978) Genetic and physiological studies of the effect of light on the development of the moss P hyscomitrella patens. Photochem. Photobiol. 27: 249-254.
12. Davis, S.J., Vener, A.V. and Vierstra, R.D. (1999) Bacteriophytochromes: phytochrome-like photoreceptors from nonphotosynthetic eubacteria. Science 286: 2517-2520.
13. Desnos, T., Puente, P., Whitelam, G.C. and Harberd, N.P. (2001) FHY1: a phytochrome A-specific signal transducer. Genes Dev. 15: 2980-2990.
14. Esch, H., Hartmann, E., Cove, D., Wada, M. and Lamparter, T. (1999) Phytochrome-controlled phototropism of protonemata of the moss Ceratodon purpureus: physiology of the wild type and class 2 ptr-mutants. Planta 209: 290-298.
15. Essen, L.O., Mailliet, J. and Hughes, J. (2008) The structure of a complete phytochrome sensory module in the Pr ground state. Proc. Natl Acad. Sci. USA 105: 14709-14714.
16. Fredericq, H. (1964) Conditions determining effects of far-red and red irradiations on flowering response of Pharbitis nil. Plant Physiol. 39: 812-816.
17. Galston, A.W. (1968) Microspectrophotometric evidence for phytochrome in plant nuclei. Proc. Natl Acad. Sci. USA 61: 454-460.
18. Hahn, J., Strauss, H.M., Landgraf, F.T., Faus Gimenèz, H., Lochnit, G., Schmieder, P., et al. (2006) Probing protein-chromophore interactions in Cph1 phytochrome via mutagenesis. FEBS J. 273: 1415-1429.
19. Han, I. S., Tseng, T.S., Eisinger, W. and Briggs, W.R. (2008) Phytochrome A regulates the intracellular distribution of phototropin 1-green fluorescent protein in Arabidopsis thaliana. Plant Cell 20: 2835-2847.
20. Harries, P.A., Pan, A. and Quatrano, R.S. (2005) Actin-related protein2/3 complex component ARPC1 is required for proper cell morphogenesis and polarized cell growth in Physcomitrella patens. Plant Cell 17: 2327-2339.
21. Haupt, W., Kroger, B. and Laux, A. (1969) Action dichroism of chloroplast movement of Mougeotia in blue light. Naturwissenschaften 56: 642.
22. Hennig, L., Buche, C., Eichenberg, K. and Schäfer, E. (1999) Dynamic properties of endogenous phytochrome A in Arabidopsis seedlings. Plant Physiol. 121: 571-577.
23. Hiltbrunner, A., Tscheuschler, A., Viczian, A., Kunkel, T., Kircher, S. and Schafer, E. (2006) FHY1 and FHL act together to mediate nuclear accumulation of the phytochrome A photoreceptor. Plant Cell Physiol. 47: 1023-1034.
24. Hiltbrunner, A., Viczian, A., Bury, E., Tscheuschler, A., Kircher, S., Toth, R., et al. (2005) Nuclear accumulation of the phytochrome A photoreceptor requires FHY1. Curr. Biol. 15: 2125-2130.
25. Hisada, A., Hanzawa, H., Weller, J.L., Nagatani, A., Reid, J.B. and Furuya, M. (2000) Light-induced nuclear translocation of endogenous pea phytochrome A visualized by immunocytochemical procedures. Plant Cell 12: 1063-1078.
26. Holmes, M.G. and Smith, H. (1975) The function of phytochrome in plants growing in the natural environment. Nature 254: 512-514.
27. Huala, E., Oeller, P.W., Liscum, E., Han, I.S., Larsen, E. and Briggs, W.R. (1997) Arabidopsis NPH1: a protein kinase with a putative redoxsensing domain. Science 278: 2120-2123.
28. Hughes, J., Lamparter, T., Mittmann, F., Hartmann, E., Gartner, W., Wilde, A., et al. (1997) A prokaryotic phytochrome. Nature 386: 663.
29. Jaffe, L. and Etzold, H. (1965) Tropic responses of Funaria spores to red light. Biophys. J. 5: 715-742.
30. Jaffe, M.J. and Galston, A.W. (1967) Phytochrome control of rapid nyctinastic movements and membrane permeability in Albizzia julibrissin. Planta 77: 135-141.
31. Jenkins, G.I. and Cove, D.J. (1983a) Light requirements for regeneration of protoplasts of the moss P hyscomitrella patens. Planta 157: 39-45.
32. Jenkins, G.I. and Cove, D.J. (1983b) Phototropism and polarotropism of primary chloronemata of the moss Physcomitrella patens: responses of mutant strains. Planta 159: 432-438.
33. Jenkins, G.I. and Cove, D.J. (1983c) Phototropism and polarotropism of primary chloronemata of the moss Physcomitrella patens: responses of the wild-type. Planta 158: 357-364.
34. Kadota, A. and Wada, M. (1999) Red light-aphototropic (rap) mutants lack red light-induced chloroplast relocation movement in the fern Adiantum capillus-veneris. Plant Cell Physiol. 40: 238-247.
35. Kadota, A., Sato, Y. and Wada, M. (2000) Intracellular chloroplast photorelocation in the moss Physcomitrella patens is mediated by phytochrome as well as by a blue-light receptor. Planta 210: 932-937.
36. Kagawa, T., Sakai, T., Suetsugu, N., Oikawa, K., Ishiguro, S., Kato, T., et al. (2001) Arabidopsis NPL1: A phototropin homolog controlling the chloroplast high-light avoidance response. Science 291: 2138-2141.
37. Kagawa, T., Kasahara, M., Abe, T., Yoshida, S. and Wada, M. (2004) Function analysis of phototropin2 using fern mutants deficient in blue light-induced chloroplast avoidance movement. Plant Cell Physiol. 45: 416-426.
38. Kanegae, T., Hayashida, E., Kuramoto, C. and Wada, M. (2006) A single chromoprotein with triple chromophores acts as both a phytochrome and a phototropin. Proc. Natl Acad. Sci. USA 103: 17997-18001.
39. Kasahara, M., Kagawa, T., Sato, Y., Kiyosue, T. and Wada, M. (2004) Phototropins mediate blue and red light-induced chloroplast movements in P hyscomitrella patens. Plant Physiol. 135: 1388-1397.
40. Kawai, H., Kanegae, T., Christensen, S., Kiyosue, T., Sato, Y., Imaizumi, T., et al. (2003) Responses of ferns to red light are mediated by an unconventional photoreceptor. Nature 421: 287-290.
41. Kim, L., Kircher, S., Toth, R., Adam, E., Schäfer, E. and Nagy, F. (2000) Light-induced nuclear import of phytochrome-A:GFP fusion proteins is differentially regulated in transgenic tobacco and Arabidopsis. Plant J. 22: 125-133.
42. Kircher, S., Kozma-Bognar, L., Kim, L., Adam, E., Harter, K., Schäfer, E., et al. (1999) Light quality dependent nuclear import of the plant photoreceptors phytochrome A and B. Plant Cell 11: 1445-1456.
43. Lagarias, J.C. and Rapoport, H. (1980) Chromopeptides from phytochrome. The structure and linkage of the Pr form of the phytochrome chromophore. J. Amer. Chem. Soc. 102: 4821-4828.
44. Lamparter, T., Carrascal, M., Michael, N., Martinez, E., Rottwinkel, G. and Abian, J. (2004) The biliverdin chromophore binds covalently to a conserved cysteine residue in the N-terminus of Agrobacterium phytochrome Agp1. Biochemistry 43: 3659-3669.
45. Lamparter, T., Esch, H., Cove, D. and Hartmann, E. (1997) Phytochrome control of phototropism and chlorophyll accumulation in the apical cells of protonemal filaments of wildtype and an aphototropic mutant of the moss C eratodon purpureus. Plant Cell Physiol. 38: 51-58.
46. Lariguet, P., Boccalandro, H.E., Alonso, J.M., Ecker, J.R., Chory, J., Casal, J.J., et al. (2003) A growth regulatory loop that provides homeostasis to phytochrome A signaling. Plant Cell 15: 2966-2978.
47. Lariguet, P. and Fankhauser, C. (2004) Hypocotyl growth orientation in blue light is determined by phytochrome A inhibition of gravitropism and phototropin promotion of phototropism. Plant J. 40: 826-834.
48. Lariguet, P., Schepens, I., Hodgson, D., Pedmale, U.V., Trevisan, M., Kami, C., et al. (2006) Phytochrome kinase substrate 1 is a phototropin 1 binding protein required for phototropism. Proc. Natl Acad. Sci. USA 103: 10134-10139.
49. Mackenzie, J.M., Coleman, R.A., Briggs, W.R. and Pratt, L.H. (1975) Reversible redistribution of phytochrome within the cell upon conversion to its physiologically active form. Proc. Natl Acad. Sci. USA 72: 799-803.
50. Marme, D. (1974) Binding properties of the plant photoreceptor phytochrome to membranes. J. Supramol. Struct. 2: 751-768.
51. Matsushita, T., Mochizuki, N. and Nagatani, A. (2003) Dimers of the N-terminal domain of phytochrome B are functional in the nucleus. Nature 424: 571-574.
52. Meske, V. and Hartmann, E. (1995) Reorganization of microfilaments in protonemal tip cells of the moss Ceratodon purpureus during the phototropic response. P rotoplasma 188: 59-69.
53. Meske, V., Ruppert, V. and Hartmann, E. (1996) Structural basis for the red light induced repolarization of tip growth in caulonema cells of Ceratodon purpureus. P rotoplasma 192: 189-198.
54. Mittmann, F., Brucker, G., Zeidler, M., Repp, A., Abts, T., Hartmann, E., et al. (2004) Targeted knockout in Physcomitrella reveals direct actions of phytochrome in the cytoplasm. Proc. Natl Acad. Sci. USA 101: 13939-13944.
55. Montgomery, B.L. and Lagarias, J.C. (2002) Phytochrome ancestry: sensors of bilins and light. Trends Plant Sci. 7: 357-366.
56. Müller, R., Fernandez, A.P., Hiltbrunner, A., Schäfer, E. and Kretsch, T. (2009) The histidine kinase-related domain of Arabidopsis phytochrome A controls the spectral sensitivity and the subcellular distribution of the photoreceptor. Plant Physiol. 150: 1297-1309.
57. Nagata, Y. (1979) Rhizoid differentiation in Spirogyra: III. Intracellular localization of phytochrome. Plant Physiol. 64: 9-12.
58. Nagatani, A., Jenkins, G.I. and Furuya, M. (1988) Non-specific association of phytochrome to nuclei during isolation from dark-grown pea. Plant Cell Physiol. 29: 1141-1145.
59. Nebel, B.J. (1969) Responses of moss protonemata to red and far-red polarized light: evidence for disc-shaped phytochrome photoreceptors. Planta. 87: 170-179.
60. Nozue, K., Kanegae, T., Imaizumi, T., Fukuda, S., Okamoto, H., Yeh, K.C., et al. (1998) A phytochrome from the fern Adiantum with features of the putative photoreceptor NPH1. Proc. Natl Acad. Sci. USA 95: 15826-15830.
61. Parks, B.M., Quail, P.H. and Hangarter, R.P. (1996) Phytochrome A regulates red-light induction of phototropic enhancement in Arabidopsis. Plant Physiol. 110: 155-162.
62. Perroud, P.F. and Quatrano, R.S. (2006) The role of ARPC4 in tip growth and alignment of the polar axis in filaments of Physcomitrella patens. Cell Motil. Cytoskeleton 63: 162-171.
63. Pratt, L.H. and Coleman, R.A. (1971) Immunocytochemical localization of phytochrome. Proc. Natl Acad. Sci. USA 68: 2431-2435.
64. Quail, P.H. (1983) Rapid action of phytochrome in photomorphogenesis. In Encyclopedia of Plant Physiology. Edited by Shropshire, W. and Mohr, H. pp. 178-212. Springer, New York.
65. Quail, P.H., Boylan, M.T., Parks, B.M., Short, T.W., Xu, Y. and Wagner, D. (1995) Phytochromes: photosensory perception and signal transduction. Science 268: 675-680.
66. Racusen, R. and Satter, R.L. (1975) Rhythmic and phytochromeregulated changes in transmembrane potential in Samanea pulvini. Nature 255: 408-410.
67. Rensing, S.A., Lang, D., Zimmer, A.D., Terry, A., Salamov, A., Shapiro, H., et al. (2008) The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319: 64-69.
68. Rösler, J., Klein, I. and Zeidler, M. (2007) Arabidopsis fhl/fhy1 double mutant reveals a distinct cytoplasmic action of phytochrome A. Proc. Natl Acad. Sci. USA 104: 10737-10742.
69. Rüdiger, W., Thümmler, F., Cmiel, E. and Schneider, S. (1983) Chromophore structure of the physiologically active form (Pfr) of phytochrome. Proc. Natl Acad. Sci. USA 80: 6244-6248.
70. Sakamoto, K. and Nagatani, A. (1996) Nuclear localization activity of phytochrome B. Plant J. 10: 859-868.
71. Sato, Y., Wada, M. and Kadota, A. (2001) Choice of tracks, microtubules and/or actin filaments for chloroplast photo-movement is differentially controlled by phytochrome and a blue light receptor. J. Cell Sci. 114: 269-279.
72. Schneider-Poetsch, H.A., Braun, B., Marx, S. and Schaumburg, A. (1991) Phytochromes and bacterial sensor proteins are related by structural and functional homologies. Hypothesis on phytochromemediated signal-transduction. FEBS Lett. 281: 245-249.
73. Sharrock, R.A. and Quail, P.H. (1989) Novel phytochrome sequences in Arabidopsis thaliana: structure, evolution, and differential expression of a plant regulatory photoreceptor family. Genes Dev. 3: 1745-1757.
74. Shen, Y., Zhou, Z., Feng, S., Li, J., Tan-Wilson, A., Qu, L.J., e t al. (2009) Phytochrome A mediates rapid red light-induced phosphorylation of Arabidopsis Far-Red Elongated Hypocotyl1 in a low fluence response. Plant Cell 21: 494-506.
75. Suetsugu, N., Mittmann, F., Wagner, G., Hughes, J. and Wada, M. (2005) A chimeric photoreceptor gene, Neochrome, has arisen twice during plant evolution. Proc. Natl Acad. Sci. USA 102: 13705-13709.
76. Takagi, S., Kong, S.G., Mineyuki, Y. and Furuya, M. (2003) Regulation of actin-dependent cytoplasmic motility by type II phytochrome occurs within seconds in Vallisneria gigantea epidermal cells. Plant Cell 15: 331-345.
77. Tanada, T. (1968) A rapid photoreversible response of barley root tips in the presence of 3-indoleacetic acid. Proc. Natl Acad. Sci. USA 59: 376-380.
78. Tepperman, J.M., Zhu, T., Chang, H.S., Wang, X. and Quail, P.H. (2001) Multiple transcription-factor genes are early targets of phytochrome A signaling. Proc. Natl Acad. Sci. USA 98: 9437-9442.
79. The Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
80. Uenaka, H. and Kadota, A. (2007) Functional analyses of the Physcomitrella patens phytochromes in regulating chloroplast avoidance movement. Plant J. 51: 1050-1061.
81. Wada, M. (1988) Chloroplast photoorientation in enucleated fern protonemata. Plant Cell Physiol. 29: 1227-1232.
82. Wada, M., Kadota, A. and Furuya, M. (1981) Intracellular photoreceptive site for polarotropism in protonema of the fern Adiantum capillus-veneris L. Plant Cell Physiol. 22: 1481-1488.
83. Yamaguchi, R., Nakamura, M., Mochizuki, N., Kay, S.A. and Nagatani, A. (1999) Light-dependent translocation of a phytochrome B-GFP fusion protein to the nucleus in transgenic Arabidopsis. J. Cell Biol. 145: 437-445.
84. Yeh, K.C. and Lagarias, J.C. (1998) Eukaryotic phytochromes: lightregulated serine/threonine protein kinases with histidine kinase ancestry. Proc. Natl Acad. Sci. USA 95: 13976-13981.
85. Yeh, K.C., Wu, S.H., Murphy, J.T. and Lagarias, J.C. (1997) A cyanobacterial phytochrome two-component light sensory system. Science 277: 1505-1508.
86. Zeidler, M., Bolle, C. and Chua, N.H. (2001) The phytochrome A specific signaling component PAT3 is a positive regulator of Arabidopsis photomorphogenesis. Plant Cell Physiol. 42: 1193-1200.
87. Zeidler, M., Lamparter, T., Hughes, J., Hartmann, E., Remberg, A., Braslavsky, S., et al. (1998) Recombinant phytochrome of the moss Ceratodon purpureus: heterologous expression and kinetic analysis of Pr→Pfr conversion. Photochem. Photobiol. 68: 857-863.
88. Zhou, Q., Hare, P.D., Yang, S.W., Zeidler, M., Huang, L.F. and Chua, N.H. (2005) FHL is required for full phytochrome A signaling and shares overlapping functions with FHY1. Plant J. 43: 356-370.