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Volumn 87, Issue 4, 2010, Pages 1525-1532

I-SceI endonuclease: A new tool for DNA repair studies and genetic manipulations in streptomycetes

Author keywords

Actinomycetes; Counter selection; Homologous recombination; I SceI; Mutagenesis

Indexed keywords

ACTINOMYCETES; ANTICANCER DRUG; BACILLUS SUBTILIS; BIOTECHNOLOGICAL APPLICATIONS; COMPLEX LIFE; DNA REPAIR; DOUBLE-STRAND BREAKS; ENDONUCLEASES; FUNCTIONAL EXPRESSION; GENE MUTATIONS; GENETIC MANIPULATIONS; GENETIC MODELS; GENOMIC DNA; GRAM-POSITIVE BACTERIUM; HOMOLOGOUS RECOMBINATION; NEW TOOLS; NON-POLAR; REPAIR MECHANISM; SECONDARY METABOLITES; STREPTOMYCES SP; STREPTOMYCETES; SYNTHETIC GENES;

EID: 77955556145     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-010-2643-y     Document Type: Article
Times cited : (36)

References (35)
  • 1
    • 0030812487 scopus 로고    scopus 로고
    • Homing endonucleases: Keeping the house in order
    • DOI 10.1093/nar/25.17.3379
    • M Belfort RJ Roberts 1997 Homing endonucleases: keeping the house in order Nucleic Acids Res 25 3379 3388 10.1093/nar/25.17.3379 1:CAS:528: DyaK2sXlvFyhu78%3D (Pubitemid 27359210)
    • (1997) Nucleic Acids Research , vol.25 , Issue.17 , pp. 3379-3388
    • Belfort, M.1    Roberts, R.J.2
  • 3
    • 0026645203 scopus 로고
    • Plasmid cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp
    • 10.1016/0378-1119(92)90627-2 1:CAS:528:DyaK38XltVGgt74%3D
    • M Bierman R Logan K O'Brian ET Seno RN Rao BE Schoner 1992 Plasmid cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp Gene 116 1 43 49 10.1016/0378-1119(92)90627-2 1:CAS:528:DyaK38XltVGgt74%3D
    • (1992) Gene , vol.116 , Issue.1 , pp. 43-49
    • Bierman, M.1    Logan, R.2    O'Brian, K.3    Seno, E.T.4    Rao, R.N.5    Schoner, B.E.6
  • 5
    • 0035883706 scopus 로고    scopus 로고
    • Homing endonucleases: Structural and functional insight into the catalysts of intron/intein mobility
    • 10.1093/nar/29.18.3757 1:CAS:528:DC%2BD3MXot1eku74%3D
    • BS Chevalier BL Stoddard 2001 Homing endonucleases: structural and functional insight into the catalysts of intron/intein mobility Nucleic Acids Res 29 3757 3774 10.1093/nar/29.18.3757 1:CAS:528:DC%2BD3MXot1eku74%3D
    • (2001) Nucleic Acids Res , vol.29 , pp. 3757-3774
    • Chevalier, B.S.1    Stoddard, B.L.2
  • 6
    • 0028919608 scopus 로고
    • Induction of homologous recombination in mammalian chromosomes by using the I-SceI system of Saccharomyces cerevisiae
    • 1:CAS:528:DyaK2MXksFWjtrw%3D
    • A Choulika A Perrin B Dujon JF Nicolas 1995 Induction of homologous recombination in mammalian chromosomes by using the I-SceI system of Saccharomyces cerevisiae Mol Cell Biol 15 1968 1973 1:CAS:528:DyaK2MXksFWjtrw%3D
    • (1995) Mol Cell Biol , vol.15 , pp. 1968-1973
    • Choulika, A.1    Perrin, A.2    Dujon, B.3    Nicolas, J.F.4
  • 7
    • 0022823962 scopus 로고
    • Mitochondrial introns as mobile genetic elements: The role of intron-encoded proteins
    • 1:CAS:528:DyaL1cXltVamuw%3D%3D
    • B Dujon L Colleaux A Jacquier F Michel C Monteilhet 1986 Mitochondrial introns as mobile genetic elements: the role of intron-encoded proteins Basic Life Sci 40 5 27 1:CAS:528:DyaL1cXltVamuw%3D%3D
    • (1986) Basic Life Sci , vol.40 , pp. 5-27
    • Dujon, B.1    Colleaux, L.2    Jacquier, A.3    Michel, F.4    Monteilhet, C.5
  • 8
    • 33646052859 scopus 로고    scopus 로고
    • Biosynthesis of the terpene phenalinolactone in Streptomyces sp. Tü6071: Analysis of the gene cluster and generation of derivatives
    • 10.1016/j.chembiol.2006.01.011
    • C Dürr HJ Schnell A Luzhetskyy R Murillo K Weber K Welzel A Vente A Bechthold 2006 Biosynthesis of the terpene phenalinolactone in Streptomyces sp. Tü6071: analysis of the gene cluster and generation of derivatives Chem Biol 13 4 365 377 10.1016/j.chembiol.2006.01.011
    • (2006) Chem Biol , vol.13 , Issue.4 , pp. 365-377
    • Dürr, C.1    Schnell, H.J.2    Luzhetskyy, A.3    Murillo, R.4    Weber, K.5    Welzel, K.6    Vente, A.7    Bechthold, A.8
  • 9
    • 45449084388 scopus 로고    scopus 로고
    • Marker removal from actinomycetes genome using FLP recombinase
    • 10.1016/j.gene.2008.04.011 1:CAS:528:DC%2BD1cXnsFaqt7c%3D
    • M Fedoryshyn L Petzke E Welle A Bechthold A Luzhetskyy 2008 Marker removal from actinomycetes genome using FLP recombinase Gene 419 43 47 10.1016/j.gene.2008.04.011 1:CAS:528:DC%2BD1cXnsFaqt7c%3D
    • (2008) Gene , vol.419 , pp. 43-47
    • Fedoryshyn, M.1    Petzke, L.2    Welle, E.3    Bechthold, A.4    Luzhetskyy, A.5
  • 10
    • 58249090930 scopus 로고    scopus 로고
    • Recent advances in meganuclease-and transposon-mediated transgenesis of medaka and zebrafish
    • 10.1007/978-1-60327-483-8-36 1:CAS:528:DC%2BD1cXhtl2gtb%2FN
    • C Grabher J Wittbrodt 2008 Recent advances in meganuclease-and transposon-mediated transgenesis of medaka and zebrafish Methods Mol Biol 461 521 539 10.1007/978-1-60327-483-8-36 1:CAS:528:DC%2BD1cXhtl2gtb%2FN
    • (2008) Methods Mol Biol , vol.461 , pp. 521-539
    • Grabher, C.1    Wittbrodt, J.2
  • 12
    • 0029328551 scopus 로고
    • In vivo biochemistry: Physical monitoring of recombination induced by site-specific endonucleases
    • 10.1002/bies.950170707 1:CAS:528:DyaK2MXnsFKmsL4%3D
    • JE Haber 1995 In vivo biochemistry: physical monitoring of recombination induced by site-specific endonucleases Bioessays 17 609 620 10.1002/bies. 950170707 1:CAS:528:DyaK2MXnsFKmsL4%3D
    • (1995) Bioessays , vol.17 , pp. 609-620
    • Haber, J.E.1
  • 13
    • 35748948065 scopus 로고    scopus 로고
    • New pleiotropic effects of eliminating a rare tRNA from Streptomyces coelicolor, revealed by combined proteomic and transcriptomic analysis of liquid cultures
    • 10.1186/1471-2164-8-261
    • A Hesketh G Bucca E Laing F Flett G Hotchkiss CP Smith KF Chater 2007 New pleiotropic effects of eliminating a rare tRNA from Streptomyces coelicolor, revealed by combined proteomic and transcriptomic analysis of liquid cultures BMC Genomics 8 261 283 10.1186/1471-2164-8-261
    • (2007) BMC Genomics , vol.8 , pp. 261-283
    • Hesketh, A.1    Bucca, G.2    Laing, E.3    Flett, F.4    Hotchkiss, G.5    Smith, C.P.6    Chater, K.F.7
  • 14
    • 33749315819 scopus 로고    scopus 로고
    • A recA null mutation may be generated in Streptomyces coelicolor
    • DOI 10.1128/JB.00951-06
    • TW Huang CW Chen 2006 A recA null mutant may be generated in Streptomyces coelicolor J Bacteriol 188 19 6771 6779 10.1128/JB.00951-06 1:CAS:528:DC%2BD28XhtVCgs7nF (Pubitemid 44497888)
    • (2006) Journal of Bacteriology , vol.188 , Issue.19 , pp. 6771-6779
    • Huang, T.-W.1    Chen, C.W.2
  • 15
    • 24244451360 scopus 로고
    • Systematik der Streptomyceten
    • S. Karger, Basel, New York
    • Hütter R (1967) Systematik der Streptomyceten. Bibl Microbiol, 6, S. Karger, Basel, New York
    • (1967) Bibl Microbiol , vol.6
    • Hütter, R.1
  • 16
    • 0022399493 scopus 로고
    • An intron-encoded protein is active in a gene conversion process that spreads an intron into a mitochondrial gene
    • 10.1016/S0092-8674(85)80011-8 1:CAS:528:DyaL2MXkvF2mtrs%3D
    • A Jacquier B Dujon 1985 An intron-encoded protein is active in a gene conversion process that spreads an intron into a mitochondrial gene Cell 41 383 394 10.1016/S0092-8674(85)80011-8 1:CAS:528:DyaL2MXkvF2mtrs%3D
    • (1985) Cell , vol.41 , pp. 383-394
    • Jacquier, A.1    Dujon, B.2
  • 17
    • 33644756518 scopus 로고    scopus 로고
    • Routine markerless gene replacement in Bacillus anthracis
    • DOI 10.1128/IAI.74.3.1949-1953.2006
    • BK Janes S Stibitz 2006 Routine markerless gene replacement in Bacillus anthracis Infect Immun 74 1949 1953 10.1128/IAI.74.3.1949-1953.2006 1:CAS:528:DC%2BD28XmtFWjs7w%3D (Pubitemid 43346834)
    • (2006) Infection and Immunity , vol.74 , Issue.3 , pp. 1949-1953
    • Janes, B.K.1    Stibitz, S.2
  • 18
    • 0029899891 scopus 로고    scopus 로고
    • Genetic manipulation of genomes with rare-cutting endonucleases
    • DOI 10.1016/0168-9525(96)10019-6
    • M Jasin 1996 Genetic manipulation of genomes with rare-cutting endonucleases Trends Genet 12 224 228 10.1016/0168-9525(96)10019-6 1:CAS:528:DyaK28XjsVOisrs%3D (Pubitemid 26163011)
    • (1996) Trends in Genetics , vol.12 , Issue.6 , pp. 224-228
    • Jasin, M.1
  • 20
    • 70349907083 scopus 로고    scopus 로고
    • Versatile dual-technology system for markerless allele replacement in Burkholderia pseudomallei
    • 10.1128/AEM.01669-09
    • C Lopez D Rholl L Trunk P Schweizer 2009 Versatile dual-technology system for markerless allele replacement in Burkholderia pseudomallei Appl Environ Microbiol 20 6496 6503 10.1128/AEM.01669-09
    • (2009) Appl Environ Microbiol , vol.20 , pp. 6496-6503
    • Lopez, C.1    Rholl, D.2    Trunk, L.3    Schweizer, P.4
  • 21
    • 84929062720 scopus 로고    scopus 로고
    • IncP plasmids are most effective in mediating conjugation between Escherichia coli and streptomycetes
    • 1:STN:280:DC%2BD28zptFSksA%3D%3D
    • A Luzhetskyy M Fedoryshyn O Gromyko B Ostash Y Rebets A Bechthold V Fedorenko 2006 IncP plasmids are most effective in mediating conjugation between Escherichia coli and streptomycetes Genetika 42 595 601 1:STN:280: DC%2BD28zptFSksA%3D%3D
    • (2006) Genetika , vol.42 , pp. 595-601
    • Luzhetskyy, A.1    Fedoryshyn, M.2    Gromyko, O.3    Ostash, B.4    Rebets, Y.5    Bechthold, A.6    Fedorenko, V.7
  • 22
    • 69049093934 scopus 로고    scopus 로고
    • DNA binding and synapsis by the large C-terminal domain of phiC31 integrase
    • 10.1093/nar/gkp485 1:CAS:528:DC%2BD1MXhtVWitLrM
    • AR McEwan PA Rowley MC Smith 2009 DNA binding and synapsis by the large C-terminal domain of phiC31 integrase Nucleic Acids Res 37 4764 4773 10.1093/nar/gkp485 1:CAS:528:DC%2BD1MXhtVWitLrM
    • (2009) Nucleic Acids Res , vol.37 , pp. 4764-4773
    • McEwan, A.R.1    Rowley, P.A.2    Smith, M.C.3
  • 23
    • 34247892342 scopus 로고    scopus 로고
    • Role of DNA repair by nonhomologous-end joining in Bacillus subtilis spore resistance to extreme dryness, mono- and polychromatic UV, and ionizing radiation
    • DOI 10.1128/JB.00018-07
    • R Moeller E Stackebrandt R Günther T Berger P Rettberg A Doherty G Horneck W Nicholson 2007 Role of DNA repair by nonhomologous-end joining in Bacillus subtilis spore resistance to extreme dryness, mono- and polychromatic UV, and ionizing radiation J Bacteriol 189 3306 3311 10.1128/JB.00018-07 1:CAS:528:DC%2BD2sXkslGqtb4%3D (Pubitemid 46697422)
    • (2007) Journal of Bacteriology , vol.189 , Issue.8 , pp. 3306-3311
    • Moeller, R.1    Stackebrandt, E.2    Reitz, G.3    Berger, T.4    Rettberg, P.5    Doherty, A.J.6    Horneck, G.7    Nicholson, W.L.8
  • 24
    • 0025357616 scopus 로고
    • Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group i intron
    • 10.1093/nar/18.6.1407 1:CAS:528:DyaK3cXktVagtbw%3D
    • C Monteilhet A Perrin A Thierry L Colleaux B Dujon 1990 Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group I intron Nucleic Acids Res 18 1407 1413 10.1093/nar/18.6.1407 1:CAS:528:DyaK3cXktVagtbw%3D
    • (1990) Nucleic Acids Res , vol.18 , pp. 1407-1413
    • Monteilhet, C.1    Perrin, A.2    Thierry, A.3    Colleaux, L.4    Dujon, B.5
  • 25
  • 26
    • 0027227703 scopus 로고
    • Asymmetrical recognition and activity of the I-SceI endonuclease on its site and on intron-exon junctions
    • 1:CAS:528:DyaK3sXltFSnurs%3D
    • A Perrin M Buckle B Dujon 1993 Asymmetrical recognition and activity of the I-SceI endonuclease on its site and on intron-exon junctions EMBO J 12 2939 2947 1:CAS:528:DyaK3sXltFSnurs%3D
    • (1993) EMBO J , vol.12 , pp. 2939-2947
    • Perrin, A.1    Buckle, M.2    Dujon, B.3
  • 27
    • 67650688116 scopus 로고    scopus 로고
    • In vivo Tn5 based transposon mutagenesis of Streptomycetes
    • L Petzke A Luzhetskyy 2008 In vivo Tn5 based transposon mutagenesis of Streptomycetes Appl Microbiol Biotechnol 5 979 986
    • (2008) Appl Microbiol Biotechnol , vol.5 , pp. 979-986
    • Petzke, L.1    Luzhetskyy, A.2
  • 28
    • 0345504146 scopus 로고    scopus 로고
    • Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome
    • DOI 10.1093/nar/27.22.4409
    • G Posfai V Kolisnychenko Z Bereczki FR Blattner 1999 Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome Nucleic Acids Res 27 4409 4415 10.1093/nar/27.22.4409 1:CAS:528:DyaK1MXns1ykurY%3D (Pubitemid 29533182)
    • (1999) Nucleic Acids Research , vol.27 , Issue.22 , pp. 4409-4415
    • Posfai, G.1    Kolisnychenko, V.2    Bereczki, Z.3    Blattner, F.R.4
  • 29
    • 0028061666 scopus 로고
    • Introduction of double-strand breaks into the genome of mouse cells by expression of a rare-cutting endonuclease
    • 1:CAS:528:DyaK2MXisVWgtL4%3D
    • P Rouet F Smih M Jasin 1994 Introduction of double-strand breaks into the genome of mouse cells by expression of a rare-cutting endonuclease Mol Cell Biol 14 8096 8106 1:CAS:528:DyaK2MXisVWgtL4%3D
    • (1994) Mol Cell Biol , vol.14 , pp. 8096-8106
    • Rouet, P.1    Smih, F.2    Jasin, M.3
  • 31
    • 0026703169 scopus 로고
    • Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector
    • 10.1073/pnas.89.18.8794 1:CAS:528:DyaK38XmtVKju7w%3D
    • H Shizuya B Birren UJ Kim V Mancino T Slepak Y Tachiiri M Simon 1992 Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector Proc Natl Acad Sci USA 89 18 8794 8797 10.1073/pnas.89.18.8794 1:CAS:528:DyaK38XmtVKju7w%3D
    • (1992) Proc Natl Acad Sci USA , vol.89 , Issue.18 , pp. 8794-8797
    • Shizuya, H.1    Birren, B.2    Kim, U.J.3    Mancino, V.4    Slepak, T.5    Tachiiri, Y.6    Simon, M.7
  • 32
    • 0034770437 scopus 로고    scopus 로고
    • Forty years with homologous recombination
    • DOI 10.1038/nm1001-1083
    • O Smithies 2001 Forty years with homologous recombination Nat Med 7 1083 1086 10.1038/nm1001-1083 1:CAS:528:DC%2BD3MXns12ksLg%3D (Pubitemid 33010006)
    • (2001) Nature Medicine , vol.7 , Issue.10 , pp. 1083-1086
    • Smithies, O.1
  • 33
    • 34447508310 scopus 로고    scopus 로고
    • Mycobacterial nonhomologous end joining mediates mutagenic repair of chromosomal double-strand DNA breaks
    • DOI 10.1128/JB.00332-07
    • N Stephanou F Gao P Bongiorno S Ehrt D Schnappinger S Shuman M Glickman 2007 Mycobacterial nonhomologous end joining mediates mutagenic repair of chromosomal double-strand DNA breaks J Bacteriol 189 5237 5246 10.1128/JB.00332-07 1:CAS:528:DC%2BD2sXotFaktL4%3D (Pubitemid 47076069)
    • (2007) Journal of Bacteriology , vol.189 , Issue.14 , pp. 5237-5246
    • Stephanou, N.C.1    Gao, F.2    Bongiorno, P.3    Ehrt, S.4    Schnappinger, D.5    Shuman, S.6    Glickman, M.S.7
  • 34
    • 29144440227 scopus 로고    scopus 로고
    • Multiple large segment deletion method for Corynebacterium glutamicum
    • DOI 10.1007/s00253-005-1976-4
    • N Suzuki H Nonaka Y Tsuge S Okayama M Inui H Yukawa 2005 Multiple large segment deletion method for Corynebacterium glutamicum Appl Microbiol Biotechnol 69 151 161 10.1007/s00253-005-1976-4 1:CAS:528:DC%2BD2MXhtlWktrfJ (Pubitemid 41795088)
    • (2005) Applied Microbiology and Biotechnology , vol.69 , Issue.2 , pp. 151-161
    • Suzuki, N.1    Nonaka, H.2    Tsuge, Y.3    Okayama, S.4    Inui, M.5    Yukawa, H.6
  • 35
    • 0034730128 scopus 로고    scopus 로고
    • Genetic footprinting with mariner-based transposition in Pseudomonas aeruginosa
    • 10.1073/pnas.97.18.10191 1:CAS:528:DC%2BD3cXmtleht74%3D
    • SM Wong JJ Mekalanos 2000 Genetic footprinting with mariner-based transposition in Pseudomonas aeruginosa Proc Natl Acad Sci USA 97 10191 10196 10.1073/pnas.97.18.10191 1:CAS:528:DC%2BD3cXmtleht74%3D
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 10191-10196
    • Wong, S.M.1    Mekalanos, J.J.2


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