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Volumn 11, Issue 1, 2010, Pages

Multi-targeted priming for genome-wide gene expression assays

Author keywords

[No Author keywords available]

Indexed keywords

NITROGEN; RIBOSOME RNA; TRANSFER RNA; FUNGAL RNA; MESSENGER RNA; PRIMER DNA;

EID: 77955531013     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-11-477     Document Type: Article
Times cited : (10)

References (58)
  • 1
    • 0033775615 scopus 로고    scopus 로고
    • Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays
    • 10.1677/jme.0.0250169, 11013345
    • Bustin SA. Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays. J Mol Endocrinol 2000, 25(2):169-193. 10.1677/jme.0.0250169, 11013345.
    • (2000) J Mol Endocrinol , vol.25 , Issue.2 , pp. 169-193
    • Bustin, S.A.1
  • 3
    • 0028789793 scopus 로고
    • Serial analysis of gene expression
    • 10.1126/science.270.5235.484, 7570003
    • Velculescu VE, Zhang L, Vogelstein B, Kinzler KW. Serial analysis of gene expression. Science 1995, 270(5235):484. 10.1126/science.270.5235.484, 7570003.
    • (1995) Science , vol.270 , Issue.5235 , pp. 484
    • Velculescu, V.E.1    Zhang, L.2    Vogelstein, B.3    Kinzler, K.W.4
  • 4
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • 10.1126/science.278.5338.680, 9381177
    • DeRisi JL, Iyer VR, Brown PO. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 1997, 278(5338):680. 10.1126/science.278.5338.680, 9381177.
    • (1997) Science , vol.278 , Issue.5338 , pp. 680
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 5
    • 45549088326 scopus 로고    scopus 로고
    • The transcriptional landscape of the yeast genome defined by RNA sequencing
    • 10.1126/science.1158441, 18451266
    • Nagalakshmi U, Wang Z, Waern K, Shou C, Raha D, Gerstein M, Snyder M. The transcriptional landscape of the yeast genome defined by RNA sequencing. Science 2008, 320(5881):1344. 10.1126/science.1158441, 18451266.
    • (2008) Science , vol.320 , Issue.5881 , pp. 1344
    • Nagalakshmi, U.1    Wang, Z.2    Waern, K.3    Shou, C.4    Raha, D.5    Gerstein, M.6    Snyder, M.7
  • 6
    • 0036319960 scopus 로고    scopus 로고
    • Design issues for cDNA microarray experiments
    • Yang YH, Speed T. Design issues for cDNA microarray experiments. Nat Rev Genet 2002, 3(8):579-588.
    • (2002) Nat Rev Genet , vol.3 , Issue.8 , pp. 579-588
    • Yang, Y.H.1    Speed, T.2
  • 8
    • 1542328972 scopus 로고    scopus 로고
    • Properties of the reverse transcription reaction in mRNA quantification
    • 10.1373/clinchem.2003.026161, 14726469
    • Stahlberg A, Hakansson J, Xian XJ, Semb H, Kubista M. Properties of the reverse transcription reaction in mRNA quantification. Clinical Chemistry 2004, 50(3):509-515. 10.1373/clinchem.2003.026161, 14726469.
    • (2004) Clinical Chemistry , vol.50 , Issue.3 , pp. 509-515
    • Stahlberg, A.1    Hakansson, J.2    Xian, X.J.3    Semb, H.4    Kubista, M.5
  • 9
    • 0030845410 scopus 로고    scopus 로고
    • Rational primer design greatly improves differential display-PCR (DD-PCR)
    • Oxford Univ Press
    • Graf D, Fisher AG, Merkenschlager M. Rational primer design greatly improves differential display-PCR (DD-PCR). 1997, 25:2239. Oxford Univ Press.
    • (1997) , vol.25 , pp. 2239
    • Graf, D.1    Fisher, A.G.2    Merkenschlager, M.3
  • 10
    • 33745482592 scopus 로고    scopus 로고
    • Reverse transcription using random pentadecamer primers increases yield and quality of resulting cDNA
    • 10.2144/000112153, 16708763
    • Stangegaard M, Dufva IH, Dufva M. Reverse transcription using random pentadecamer primers increases yield and quality of resulting cDNA. BioTechniques 2006, 40(5):649-657. 10.2144/000112153, 16708763.
    • (2006) BioTechniques , vol.40 , Issue.5 , pp. 649-657
    • Stangegaard, M.1    Dufva, I.H.2    Dufva, M.3
  • 11
    • 36348929994 scopus 로고    scopus 로고
    • Counterselection of prokaryotic ribosomal RNA during reverse transcription using non-random hexameric oligonucleotides
    • 10.1016/j.mimet.2007.09.010, 17961767
    • Gonzalez JM, Robb FT. Counterselection of prokaryotic ribosomal RNA during reverse transcription using non-random hexameric oligonucleotides. J Microbiol Methods 2007, 71(3):288-291. 10.1016/j.mimet.2007.09.010, 17961767.
    • (2007) J Microbiol Methods , vol.71 , Issue.3 , pp. 288-291
    • Gonzalez, J.M.1    Robb, F.T.2
  • 12
    • 0034044318 scopus 로고    scopus 로고
    • Genome-directed primers for selective labeling of bacterial transcripts for DNA microarray analysis
    • 10.1038/76543, 10835610
    • Talaat AM, Hunter P, Johnston SA. Genome-directed primers for selective labeling of bacterial transcripts for DNA microarray analysis. Nat Biotechnol 2000, 18(6):679-682. 10.1038/76543, 10835610.
    • (2000) Nat Biotechnol , vol.18 , Issue.6 , pp. 679-682
    • Talaat, A.M.1    Hunter, P.2    Johnston, S.A.3
  • 14
    • 0027200335 scopus 로고
    • Intermolecular mRNA-rRNA hybridization and the distribution of potential interaction regions in murine 18S rRNA
    • 10.1093/nar/21.4.1007, 309236, 8451167
    • Matveeva OM, Shabalina SA. Intermolecular mRNA-rRNA hybridization and the distribution of potential interaction regions in murine 18S rRNA. Nucl Acids Res 1993, 21:1007-1007. 10.1093/nar/21.4.1007, 309236, 8451167.
    • (1993) Nucl Acids Res , vol.21 , pp. 1007-1007
    • Matveeva, O.M.1    Shabalina, S.A.2
  • 15
    • 0030794656 scopus 로고    scopus 로고
    • Genetic regulation of nitrogen metabolism in the fungi
    • 232598, 9106362
    • Marzluf GA. Genetic regulation of nitrogen metabolism in the fungi. Microbiol Mol Biol Rev 1997, 61(1):17-32. 232598, 9106362.
    • (1997) Microbiol Mol Biol Rev , vol.61 , Issue.1 , pp. 17-32
    • Marzluf, G.A.1
  • 16
    • 59349119879 scopus 로고    scopus 로고
    • The complexity of nitrogen metabolism and nitrogen-regulated gene expression in plant pathogenic fungi
    • Bolton MD, Thomma B. The complexity of nitrogen metabolism and nitrogen-regulated gene expression in plant pathogenic fungi. Physiol Mol Plant Pathol 2008, 72(4-6):104-110.
    • (2008) Physiol Mol Plant Pathol , vol.72 , Issue.4-6 , pp. 104-110
    • Bolton, M.D.1    Thomma, B.2
  • 17
    • 33746846959 scopus 로고    scopus 로고
    • Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea
    • 10.1016/j.fgb.2006.03.005, 16731015
    • Donofrio NM, Oh Y, Lundy R, Pan H, Brown DE, Jeong JS, Coughlan S, Mitchell TK, Dean RA. Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea. Fungal Genet Biol 2006, 43(9):605-617. 10.1016/j.fgb.2006.03.005, 16731015.
    • (2006) Fungal Genet Biol , vol.43 , Issue.9 , pp. 605-617
    • Donofrio, N.M.1    Oh, Y.2    Lundy, R.3    Pan, H.4    Brown, D.E.5    Jeong, J.S.6    Coughlan, S.7    Mitchell, T.K.8    Dean, R.A.9
  • 18
    • 33845665850 scopus 로고    scopus 로고
    • Nitrogen transport in the ectomycorrhiza association: The Hebeloma cylindrosporum-Pinus pinaster model
    • 10.1016/j.phytochem.2006.09.021, 17083951
    • Mueller T, Avolio M, Olivi M, Benjdia M, Rikirsch E, Kasaras A, Fitz M, Chalot M, Wipf D. Nitrogen transport in the ectomycorrhiza association: The Hebeloma cylindrosporum-Pinus pinaster model. Phytochemistry 2007, 68(1):41-51. 10.1016/j.phytochem.2006.09.021, 17083951.
    • (2007) Phytochemistry , vol.68 , Issue.1 , pp. 41-51
    • Mueller, T.1    Avolio, M.2    Olivi, M.3    Benjdia, M.4    Rikirsch, E.5    Kasaras, A.6    Fitz, M.7    Chalot, M.8    Wipf, D.9
  • 19
    • 52649172286 scopus 로고    scopus 로고
    • A gene repertoire for nitrogen transporters in Laccaria bicolor
    • 10.1111/j.1469-8137.2008.02580.x, 18665901
    • Lucic E, Fourrey C, Kohler A, Martin F, Chalot M, Brun-Jacob A. A gene repertoire for nitrogen transporters in Laccaria bicolor. New Phytol 2008, 180(2):343-364. 10.1111/j.1469-8137.2008.02580.x, 18665901.
    • (2008) New Phytol , vol.180 , Issue.2 , pp. 343-364
    • Lucic, E.1    Fourrey, C.2    Kohler, A.3    Martin, F.4    Chalot, M.5    Brun-Jacob, A.6
  • 20
    • 0032215737 scopus 로고    scopus 로고
    • Nitrogen demand of different yeast strains during alcoholic fermentation. Importance of the stationary phase
    • Manginot C, Roustan JL, Sablayrolles JM. Nitrogen demand of different yeast strains during alcoholic fermentation. Importance of the stationary phase. Enzyme Microb Technol 1998, 23(7-8):511-517.
    • (1998) Enzyme Microb Technol , vol.23 , Issue.7-8 , pp. 511-517
    • Manginot, C.1    Roustan, J.L.2    Sablayrolles, J.M.3
  • 21
    • 0035733887 scopus 로고    scopus 로고
    • Functional genomic analysis of a commercial wine strain of Saccharomyces cerevisiae under differing nitrogen conditions
    • 10.1111/j.1567-1364.2001.tb00022.x, 12702356
    • Backhus LE, DeRisi J, Brown PO, Bisson LF. Functional genomic analysis of a commercial wine strain of Saccharomyces cerevisiae under differing nitrogen conditions. FEMS Yeast Res 2001, 1(2):111-125. 10.1111/j.1567-1364.2001.tb00022.x, 12702356.
    • (2001) FEMS Yeast Res , vol.1 , Issue.2 , pp. 111-125
    • Backhus, L.E.1    DeRisi, J.2    Brown, P.O.3    Bisson, L.F.4
  • 22
    • 0017431084 scopus 로고
    • The cytogenetics of Neurospora
    • full_text, 327765
    • Perkins DD, Barry EG. The cytogenetics of Neurospora. Adv Genet 1977, 19:133-285. full_text, 327765.
    • (1977) Adv Genet , vol.19 , pp. 133-285
    • Perkins, D.D.1    Barry, E.G.2
  • 23
    • 0019293982 scopus 로고
    • Meiosis in Neurospora crassa .I. the Isolation of recessive mutants defective in the production of viable ascospores
    • 1214305, 6455324
    • Delange AM, Griffiths AJF. Meiosis in Neurospora crassa .I. the Isolation of recessive mutants defective in the production of viable ascospores. Genetics 1980, 96(2):367-378. 1214305, 6455324.
    • (1980) Genetics , vol.96 , Issue.2 , pp. 367-378
    • Delange, A.M.1    Griffiths, A.J.F.2
  • 24
    • 0000012737 scopus 로고
    • Genetic control of the sexual cycle in Neurospora
    • Raju NB. Genetic control of the sexual cycle in Neurospora. Mycol Res 1992, 96:241-262.
    • (1992) Mycol Res , vol.96 , pp. 241-262
    • Raju, N.B.1
  • 26
    • 0037197827 scopus 로고    scopus 로고
    • Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription
    • 10.1073/pnas.092140899, 122918, 11972056
    • Nam DK, Lee S, Zhou GL, Cao XH, Wang C, Clark T, Chen JJ, Rowley JD, Wang SM. Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription. Proc Natl Acad Sci USA 2002, 99(9):6152-6156. 10.1073/pnas.092140899, 122918, 11972056.
    • (2002) Proc Natl Acad Sci USA , vol.99 , Issue.9 , pp. 6152-6156
    • Nam, D.K.1    Lee, S.2    Zhou, G.L.3    Cao, X.H.4    Wang, C.5    Clark, T.6    Chen, J.J.7    Rowley, J.D.8    Wang, S.M.9
  • 27
    • 2942612362 scopus 로고    scopus 로고
    • Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels and spotted DNA microarrays
    • 10.1186/1471-2105-5-54, 420235, 15128431
    • Townsend J. Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels and spotted DNA microarrays. BMC Bioinformatics 2004, 5(1):54. 10.1186/1471-2105-5-54, 420235, 15128431.
    • (2004) BMC Bioinformatics , vol.5 , Issue.1 , pp. 54
    • Townsend, J.1
  • 28
    • 0021913292 scopus 로고
    • Assembly of the mitochondrial membrane system
    • Dieckmann CL, Tzagoloff A. Assembly of the mitochondrial membrane system. J Biol Chem 1985, 260:1513-1520.
    • (1985) J Biol Chem , vol.260 , pp. 1513-1520
    • Dieckmann, C.L.1    Tzagoloff, A.2
  • 29
    • 1942533644 scopus 로고    scopus 로고
    • Aep3p stabilizes the mitochondrial bicistronic mRNA encoding subunits 6 and 8 of the H+-translocating ATP synthase of Saccharomyces cerevisiae
    • 10.1074/jbc.M314162200, 14742425
    • Ellis TP, Helfenbein KG, Tzagoloff A, Dieckmann CL. Aep3p stabilizes the mitochondrial bicistronic mRNA encoding subunits 6 and 8 of the H+-translocating ATP synthase of Saccharomyces cerevisiae. J Biol Chem 2004, 279(16):15728. 10.1074/jbc.M314162200, 14742425.
    • (2004) J Biol Chem , vol.279 , Issue.16 , pp. 15728
    • Ellis, T.P.1    Helfenbein, K.G.2    Tzagoloff, A.3    Dieckmann, C.L.4
  • 30
    • 0028984035 scopus 로고
    • The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae
    • 394481, 7664742
    • Manthey GM, McEwen JE. The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995, 14(16):4031. 394481, 7664742.
    • (1995) EMBO J , vol.14 , Issue.16 , pp. 4031
    • Manthey, G.M.1    McEwen, J.E.2
  • 31
    • 0024892285 scopus 로고
    • The role of a conserved dodecamer sequence in yeast mitochondrial gene expression
    • Butow RA, Zhu H, Perlman P, Conrad-Webb H. The role of a conserved dodecamer sequence in yeast mitochondrial gene expression. Genome 1989, 31(2):757-760.
    • (1989) Genome , vol.31 , Issue.2 , pp. 757-760
    • Butow, R.A.1    Zhu, H.2    Perlman, P.3    Conrad-Webb, H.4
  • 32
    • 0003903343 scopus 로고
    • Selection of poly(A)+ RNA by Oligo(dT)-cellulose chromatography
    • Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY
    • Sambrook J, Fritsch EF, Maniatis T. Selection of poly(A)+ RNA by Oligo(dT)-cellulose chromatography. Molecular cloning 1989, 1:7.26-27.29. Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY.
    • (1989) Molecular cloning , vol.1
    • Sambrook, J.1    Fritsch, E.F.2    Maniatis, T.3
  • 33
    • 0000438808 scopus 로고    scopus 로고
    • Preparation of Poly(A)+ RNA
    • New York: John Wiley & Sons, Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K
    • Kingston R. Preparation of Poly(A)+ RNA. Current Protocols in Molecular Biology 1997, 4.5.1-4.5.3. New York: John Wiley & Sons, Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K.
    • (1997) Current Protocols in Molecular Biology
    • Kingston, R.1
  • 34
    • 0001206879 scopus 로고    scopus 로고
    • Screening poly (dA/dT)-cDNAs for gene identification
    • 10.1073/pnas.97.8.4162, 18183, 10760283
    • Wang SM, Fears SC, Zhang L, Chen JJ, Rowley JD. Screening poly (dA/dT)-cDNAs for gene identification. Proc Natl Acad Sci USA 2000, 97(8):4162. 10.1073/pnas.97.8.4162, 18183, 10760283.
    • (2000) Proc Natl Acad Sci USA , vol.97 , Issue.8 , pp. 4162
    • Wang, S.M.1    Fears, S.C.2    Zhang, L.3    Chen, J.J.4    Rowley, J.D.5
  • 37
    • 33845870439 scopus 로고    scopus 로고
    • Conservation of the metabolomic response to starvation across two divergent microbes
    • 10.1073/pnas.0609508103, 1697828, 17159141
    • Brauer MJ, Yuan J, Bennett BD, Lu WY, Kimball E, Botstein D, Rabinowitz JD. Conservation of the metabolomic response to starvation across two divergent microbes. Proc Natl Acad Sci USA 2006, 103(51):19302-19307. 10.1073/pnas.0609508103, 1697828, 17159141.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.51 , pp. 19302-19307
    • Brauer, M.J.1    Yuan, J.2    Bennett, B.D.3    Lu, W.Y.4    Kimball, E.5    Botstein, D.6    Rabinowitz, J.D.7
  • 38
    • 0020356027 scopus 로고
    • Mechanisms of appearance of the Pasteur effect in Saccharomyces cerevisiae: inactivation of sugar transport systems
    • 221369, 6749805
    • Lagunas R, Dominguez C, Busturia A, Saez MJ. Mechanisms of appearance of the Pasteur effect in Saccharomyces cerevisiae: inactivation of sugar transport systems. J Bacteriol 1982, 152(1):19-25. 221369, 6749805.
    • (1982) J Bacteriol , vol.152 , Issue.1 , pp. 19-25
    • Lagunas, R.1    Dominguez, C.2    Busturia, A.3    Saez, M.J.4
  • 39
    • 0030859939 scopus 로고    scopus 로고
    • An important role for glutathione and gamma-glutamyltranspeptidase in the supply of growth requirements during nitrogen starvation of the yeast Saccharomyces cerevisiae
    • 10.1099/00221287-143-6-1885, 9202464
    • Mehdi K, Penninckx MJ. An important role for glutathione and gamma-glutamyltranspeptidase in the supply of growth requirements during nitrogen starvation of the yeast Saccharomyces cerevisiae. Microbiology 1997, 143:1885-1889. 10.1099/00221287-143-6-1885, 9202464.
    • (1997) Microbiology , vol.143 , pp. 1885-1889
    • Mehdi, K.1    Penninckx, M.J.2
  • 40
    • 0025058543 scopus 로고
    • The GLN3 gene product is required for transcriptional activation of allantoin system gene expression in Saccharomyces cerevisiae
    • 208530, 2153652
    • Cooper TG, Ferguson D, Rai R, Bysani N. The GLN3 gene product is required for transcriptional activation of allantoin system gene expression in Saccharomyces cerevisiae. J Bacteriol 1990, 172(2):1014-1018. 208530, 2153652.
    • (1990) J Bacteriol , vol.172 , Issue.2 , pp. 1014-1018
    • Cooper, T.G.1    Ferguson, D.2    Rai, R.3    Bysani, N.4
  • 41
    • 0028147205 scopus 로고
    • Symmetrical cell-division in pseudohyphae of the yeast Saccharomyces cerevisiae
    • 301123, 7841518
    • Kron SJ, Styles CA, Fink GR. Symmetrical cell-division in pseudohyphae of the yeast Saccharomyces cerevisiae. Mol Biol Cell 1994, 5(9):1003-1022. 301123, 7841518.
    • (1994) Mol Biol Cell , vol.5 , Issue.9 , pp. 1003-1022
    • Kron, S.J.1    Styles, C.A.2    Fink, G.R.3
  • 42
    • 0141484319 scopus 로고    scopus 로고
    • Isolation and characterization from pathogenic fungi of genes encoding ammonium permeases and their roles in dimorphism
    • 10.1046/j.1365-2958.2003.03680.x, 14507379
    • Smith DG, Garcia-Pedrajas MD, Gold SE, Perlin MH. Isolation and characterization from pathogenic fungi of genes encoding ammonium permeases and their roles in dimorphism. Molecular Microbiology 2003, 50(1):259-275. 10.1046/j.1365-2958.2003.03680.x, 14507379.
    • (2003) Molecular Microbiology , vol.50 , Issue.1 , pp. 259-275
    • Smith, D.G.1    Garcia-Pedrajas, M.D.2    Gold, S.E.3    Perlin, M.H.4
  • 43
    • 0031827817 scopus 로고    scopus 로고
    • Changes in fatty acid composition of Neurospora crassa accompany sexual development and ascospore germination
    • 10.1099/00221287-144-7-1713, 9695905
    • Goodrich-Tanrikulu M, Howe K, Stafford A, Nelson MA. Changes in fatty acid composition of Neurospora crassa accompany sexual development and ascospore germination. Microbiology 1998, 144:1713-1720. 10.1099/00221287-144-7-1713, 9695905.
    • (1998) Microbiology , vol.144 , pp. 1713-1720
    • Goodrich-Tanrikulu, M.1    Howe, K.2    Stafford, A.3    Nelson, M.A.4
  • 44
    • 0029822056 scopus 로고    scopus 로고
    • Circadian clock-controlled genes isolated from Neurospora crassa are late night- to early morning-specific
    • 10.1073/pnas.93.23.13096, 24052, 8917550
    • Bell-Pedersen D, Shinohara ML, Loros JJ, Dunlap JC. Circadian clock-controlled genes isolated from Neurospora crassa are late night- to early morning-specific. Proc Natl Acad Sci USA 1996, 93(23):13096-13101. 10.1073/pnas.93.23.13096, 24052, 8917550.
    • (1996) Proc Natl Acad Sci USA , vol.93 , Issue.23 , pp. 13096-13101
    • Bell-Pedersen, D.1    Shinohara, M.L.2    Loros, J.J.3    Dunlap, J.C.4
  • 45
    • 0036367217 scopus 로고    scopus 로고
    • The Neurospora crassa pheromone precursor genes are regulated by the mating type locus and the circadian clock
    • 10.1046/j.1365-2958.2002.03052.x, 12139624
    • Bobrowicz P, Pawlak R, Correa A, Bell-Pedersen D, Ebbole DJ. The Neurospora crassa pheromone precursor genes are regulated by the mating type locus and the circadian clock. Molecular Microbiology 2002, 45(3):795-804. 10.1046/j.1365-2958.2002.03052.x, 12139624.
    • (2002) Molecular Microbiology , vol.45 , Issue.3 , pp. 795-804
    • Bobrowicz, P.1    Pawlak, R.2    Correa, A.3    Bell-Pedersen, D.4    Ebbole, D.J.5
  • 46
    • 0033229970 scopus 로고    scopus 로고
    • The economics of ribosome biosynthesis in yeast
    • 10.1016/S0968-0004(99)01460-7, 10542411
    • Warner JR. The economics of ribosome biosynthesis in yeast. Trends Biochem Sci 1999, 24(11):437-440. 10.1016/S0968-0004(99)01460-7, 10542411.
    • (1999) Trends Biochem Sci , vol.24 , Issue.11 , pp. 437-440
    • Warner, J.R.1
  • 47
    • 84981669971 scopus 로고
    • Physiological changes during protoperithecial differentiation in Neurospora tetrasperma
    • Viswanath-Reddy M, Turian G. Physiological changes during protoperithecial differentiation in Neurospora tetrasperma. Physiol Plant 1975, 35(2):166-174.
    • (1975) Physiol Plant , vol.35 , Issue.2 , pp. 166-174
    • Viswanath-Reddy, M.1    Turian, G.2
  • 48
    • 43049138051 scopus 로고    scopus 로고
    • Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease
    • 10.1038/ncb1723, 18391941
    • Kraft C, Deplazes A, Sohrmann M, Peter M. Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease. Nat Cell Biol 2008, 10(5):602-610. 10.1038/ncb1723, 18391941.
    • (2008) Nat Cell Biol , vol.10 , Issue.5 , pp. 602-610
    • Kraft, C.1    Deplazes, A.2    Sohrmann, M.3    Peter, M.4
  • 49
    • 33846322849 scopus 로고    scopus 로고
    • Quantification of low-expressed mRNA using 5' LNA-containing real-time PCR primers
    • 10.1016/j.bbrc.2006.12.194, 17217915
    • Malgoyre A, Banzet S, Mouret C, Bigard A, Peinnequin A. Quantification of low-expressed mRNA using 5' LNA-containing real-time PCR primers. Biochem Biophys Res Commun 2007, 354(1):246-252. 10.1016/j.bbrc.2006.12.194, 17217915.
    • (2007) Biochem Biophys Res Commun , vol.354 , Issue.1 , pp. 246-252
    • Malgoyre, A.1    Banzet, S.2    Mouret, C.3    Bigard, A.4    Peinnequin, A.5
  • 51
    • 0037572260 scopus 로고    scopus 로고
    • Population genetic variation in genome-wide gene expression
    • 10.1093/molbev/msg106, 12716989
    • Townsend JP, Cavalieri D, Hartl DL. Population genetic variation in genome-wide gene expression. Mol Biol Evol 2003, 20(6):955-963. 10.1093/molbev/msg106, 12716989.
    • (2003) Mol Biol Evol , vol.20 , Issue.6 , pp. 955-963
    • Townsend, J.P.1    Cavalieri, D.2    Hartl, D.L.3
  • 53
    • 0037975700 scopus 로고    scopus 로고
    • Bayesian analysis of gene expression levels: statistical quantification of relative mRNA level across multiple strains or treatments
    • research0071.0071-0071.0016, 10.1186/gb-2002-3-12-research0071, 151173, 12537560
    • Townsend JP, Hartl D. Bayesian analysis of gene expression levels: statistical quantification of relative mRNA level across multiple strains or treatments. Genome Biol 2002, 3(12). research0071.0071-0071.0016, 10.1186/gb-2002-3-12-research0071, 151173, 12537560.
    • (2002) Genome Biol , vol.3 , Issue.12
    • Townsend, J.P.1    Hartl, D.2
  • 54
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • 10.1093/nar/28.1.27, 102409, 10592173
    • Kanehisa M, Goto S. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucl Acids Res 2000, 28(1):27-30. 10.1093/nar/28.1.27, 102409, 10592173.
    • (2000) Nucl Acids Res , vol.28 , Issue.1 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 55
    • 75749156884 scopus 로고    scopus 로고
    • The filamentous fungal gene expression database (FFGED)
    • 10.1016/j.fgb.2009.12.001, 20025988
    • Zhang Z, Townsend JP. The filamentous fungal gene expression database (FFGED). Fungal Genet Biol 2009, 47(3):199-204. 10.1016/j.fgb.2009.12.001, 20025988.
    • (2009) Fungal Genet Biol , vol.47 , Issue.3 , pp. 199-204
    • Zhang, Z.1    Townsend, J.P.2
  • 56
    • 33747884345 scopus 로고    scopus 로고
    • Gene expression omnibus: microarray data storage, submission, retrieval, and analysis
    • 10.1016/S0076-6879(06)11019-8, 1619900, 16939800
    • Barrett T, Edgar R. Gene expression omnibus: microarray data storage, submission, retrieval, and analysis. Methods Enzymol 2006, 411:352-369. 10.1016/S0076-6879(06)11019-8, 1619900, 16939800.
    • (2006) Methods Enzymol , vol.411 , pp. 352-369
    • Barrett, T.1    Edgar, R.2
  • 57
    • 77956405947 scopus 로고    scopus 로고
    • RNA extraction, probe preparation, and competitive hybridization for transcriptional profiling using Neurospora crassa long-oligomer DNA microarrays
    • Clark AT, Guilmette JM, Renstrom D, Townsend JP. RNA extraction, probe preparation, and competitive hybridization for transcriptional profiling using Neurospora crassa long-oligomer DNA microarrays. Fungal Genet Rep 2008, 55:18-28.
    • (2008) Fungal Genet Rep , vol.55 , pp. 18-28
    • Clark, A.T.1    Guilmette, J.M.2    Renstrom, D.3    Townsend, J.P.4
  • 58
    • 29144452005 scopus 로고    scopus 로고
    • Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination
    • 10.1093/nar/gki953, 1283539, 16287898
    • Kasuga T, Townsend JP, Tian C, Gilbert LB, Mannhaupt G, Taylor JW, Glass NL. Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination. Nucl Acids Res 2005, 33(20):6469-6485. 10.1093/nar/gki953, 1283539, 16287898.
    • (2005) Nucl Acids Res , vol.33 , Issue.20 , pp. 6469-6485
    • Kasuga, T.1    Townsend, J.P.2    Tian, C.3    Gilbert, L.B.4    Mannhaupt, G.5    Taylor, J.W.6    Glass, N.L.7


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