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Volumn 11, Issue 1, 2010, Pages

High-throughput SNP discovery and assay development in common bean

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

EID: 77955527989     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-11-475     Document Type: Article
Times cited : (123)

References (28)
  • 1
    • 33746266617 scopus 로고    scopus 로고
    • Highly parallel genomic assays
    • 10.1038/nrg1901, 16847463
    • Fan JB, Chee MS, Gunderson KL. Highly parallel genomic assays. Nat Rev Genet 2006, 7(8):632-644. 10.1038/nrg1901, 16847463.
    • (2006) Nat Rev Genet , vol.7 , Issue.8 , pp. 632-644
    • Fan, J.B.1    Chee, M.S.2    Gunderson, K.L.3
  • 6
    • 76749130701 scopus 로고    scopus 로고
    • High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
    • 10.1186/1471-2164-11-38, 2817691, 20078886
    • Hyten DL, Cannon SB, Song Q, Weeks N, Fickus EW, Shoemaker RC, Specht JE, Farmer AD, May GD, Cregan PB. High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence. BMC Genomics 2010, 11(1):38. 10.1186/1471-2164-11-38, 2817691, 20078886.
    • (2010) BMC Genomics , vol.11 , Issue.1 , pp. 38
    • Hyten, D.L.1    Cannon, S.B.2    Song, Q.3    Weeks, N.4    Fickus, E.W.5    Shoemaker, R.C.6    Specht, J.E.7    Farmer, A.D.8    May, G.D.9    Cregan, P.B.10
  • 8
    • 74549158577 scopus 로고    scopus 로고
    • Single Nucleotide Polymorphisms in Common Bean: Their Discovery and Genotyping Using a Multiplex Detection System
    • Gaitán-Solís E, Choi IY, Quigley C, Cregan P, Tohme J. Single Nucleotide Polymorphisms in Common Bean: Their Discovery and Genotyping Using a Multiplex Detection System. The Plant Genome 2008, 1(2):125-134.
    • (2008) The Plant Genome , vol.1 , Issue.2 , pp. 125-134
    • Gaitán-Solís, E.1    Choi, I.Y.2    Quigley, C.3    Cregan, P.4    Tohme, J.5
  • 11
    • 85167510667 scopus 로고    scopus 로고
    • SNP discovery via genomic reduction, barcoding, and 454-pyroseqeuncing in Amaranth
    • Maughan PJ, Yourstone SM, Jellen EN, Udall JA. SNP discovery via genomic reduction, barcoding, and 454-pyroseqeuncing in Amaranth. The Plant Genome 2009, 2(3):260-270.
    • (2009) The Plant Genome , vol.2 , Issue.3 , pp. 260-270
    • Maughan, P.J.1    Yourstone, S.M.2    Jellen, E.N.3    Udall, J.A.4
  • 12
    • 0028873712 scopus 로고
    • Nuclear DNA amounts in angiosperms
    • Bennett MD, Leitch IJ. Nuclear DNA amounts in angiosperms. Ann bot 1995, 76(2):113-176.
    • (1995) Ann bot , vol.76 , Issue.2 , pp. 113-176
    • Bennett, M.D.1    Leitch, I.J.2
  • 13
    • 34548128406 scopus 로고    scopus 로고
    • SNP discovery via 454 transcriptome sequencing
    • 10.1111/j.1365-313X.2007.03193.x, 17662031
    • Barbazuk WB, Scott JE, Hsin DC, Li L, Patrick SS. SNP discovery via 454 transcriptome sequencing. The Plant Journal 2007, 51(5):910-918. 10.1111/j.1365-313X.2007.03193.x, 17662031.
    • (2007) The Plant Journal , vol.51 , Issue.5 , pp. 910-918
    • Barbazuk, W.B.1    Scott, J.E.2    Hsin, D.C.3    Li, L.4    Patrick, S.S.5
  • 15
    • 13844261201 scopus 로고    scopus 로고
    • Comparison of four flow cytometric SNP detection assays and their use in plant improvement
    • 10.1007/s00122-004-1827-1, 15551036
    • Lee SH, Walker DR, Cregan PB, Boerma HR. Comparison of four flow cytometric SNP detection assays and their use in plant improvement. Theor appl genet 2004, 110(1):167-174. 10.1007/s00122-004-1827-1, 15551036.
    • (2004) Theor appl genet , vol.110 , Issue.1 , pp. 167-174
    • Lee, S.H.1    Walker, D.R.2    Cregan, P.B.3    Boerma, H.R.4
  • 19
    • 34548128406 scopus 로고    scopus 로고
    • SNP discovery via 454 transcriptome sequencing
    • 10.1111/j.1365-313X.2007.03193.x, 2169515, 17662031
    • Barbazuk WB, Emrich SJ, Chen HD, Li L, Schnable PS. SNP discovery via 454 transcriptome sequencing. Plant J 2007, 51(5):910-918. 10.1111/j.1365-313X.2007.03193.x, 2169515, 17662031.
    • (2007) Plant J , vol.51 , Issue.5 , pp. 910-918
    • Barbazuk, W.B.1    Emrich, S.J.2    Chen, H.D.3    Li, L.4    Schnable, P.S.5
  • 20
    • 48249125753 scopus 로고    scopus 로고
    • High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
    • 10.1186/1471-2164-9-312, 2483731, 18590545
    • Novaes E, Drost D, Farmerie W, Pappas G, Grattapaglia D, Sederoff R, Kirst M. High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome. BMC Genomics 2008, 9(1):312. 10.1186/1471-2164-9-312, 2483731, 18590545.
    • (2008) BMC Genomics , vol.9 , Issue.1 , pp. 312
    • Novaes, E.1    Drost, D.2    Farmerie, W.3    Pappas, G.4    Grattapaglia, D.5    Sederoff, R.6    Kirst, M.7
  • 22
    • 34548546841 scopus 로고    scopus 로고
    • A soybean transcript map: gene distribution, haplotype and single-nucleotide polymorphism analysis
    • 10.1534/genetics.107.070821, 1893076, 17339218
    • Choi I-Y, Hyten DL, Matukumalli LK, Song Q, Chaky JM, Quigley CV, Chase K, Lark KG, Reiter RS, Yoon M-S, et al. A soybean transcript map: gene distribution, haplotype and single-nucleotide polymorphism analysis. Genetics 2007, 176(1):685-696. 10.1534/genetics.107.070821, 1893076, 17339218.
    • (2007) Genetics , vol.176 , Issue.1 , pp. 685-696
    • Choi, I.-.Y.1    Hyten, D.L.2    Matukumalli, L.K.3    Song, Q.4    Chaky, J.M.5    Quigley, C.V.6    Chase, K.7    Lark, K.G.8    Reiter, R.S.9    Yoon, M.-.S.10
  • 24
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol 2000, 132:365-386.
    • (2000) Methods Mol Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 25
    • 0030920610 scopus 로고    scopus 로고
    • Sequence mapping by electronic PCR
    • 310656, 9149949
    • Schuler GD. Sequence mapping by electronic PCR. Genome Res 1997, 7(5):541-550. 310656, 9149949.
    • (1997) Genome Res , vol.7 , Issue.5 , pp. 541-550
    • Schuler, G.D.1
  • 26
    • 77956179217 scopus 로고    scopus 로고
    • SAS In., Version 9.1th edn. Cary, NC: SAS Institute, Inc, SAS Institute
    • SAS Institute 2003, SAS In., Version 9.1th edn. Cary, NC: SAS Institute, Inc, SAS Institute.
    • (2003)


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.