Influence of microbial photosynthesis on tufa stromatolite formation and ambient water chemistry, SW Japan

Geochimica et Cosmochimica Acta

Volumn 74, Issue 18, 2010, Pages 5289-5304

  Shiraishi, Fumito ^a   Okumura, Tomoyo ^a   Takahashi, Yoshio ^b   Kano, Akihiro ^a  

^a KYUSHU UNIVERSITY   (Japan)

^b HIROSHIMA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ALKALINITY; CALCITE; CYANOBACTERIUM; PH; PHOTOSYNTHESIS; PRECIPITATION (CHEMISTRY); STREAM; STROMATOLITE; TUFA; WATER CHEMISTRY;

JAPAN;

CYANOBACTERIA; PHOTOBACTERIA;

EID: 77955515006     PISSN: 00167037     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gca.2010.06.025     Document Type: Article

References (52)

1. Andrews J.E. Palaeoclimatic records from stable isotopes in riverine tufas: synthesis and review. Earth Sci. Rev. 2006, 75:85-104.
2. Andrews J.E., Brasier A.T. Seasonal records of climatic change in annually laminated tufas: short review and future prospects. J. Quatern. Sci. 2005, 20:411-421.
3. Arp G., Reimer A., Reitner J. Photosynthesis-induced biofilm calcification and calcium concentrations in Phanerozoic oceans. Science 2001, 292:1701-1704.
4. Arp G., Wedemeyer N., Reitner J. Fluvial tufa formation in a hard-water creek (Deinschwanger Bach, Franconian Alb, Germany). Facies 2001, 44:1-22.
5. Arp G., Bissett A., Brinkmann N., Cousin S., de Beer D., Friedl T., Mohr K., Neu T.R., Reimer A., Shiraishi F., Stackebrandt E., Zippel B. Tufa-forming biofilms of German karstwater creeks: microorganisms, exopolymers, hydrochemistry and calcification. Geol. Soc. Lond. Spec. Publ. 2010, 336:83-118.
6. Awramik S.M. Ancient stromatolites and microbial mats. Microbial Mats: Stromatolites 1984, 1-22. Alan R. Liss, New York. Y. Cohen, R.W. Castenholtz, H.O. Halvorson (Eds.).
7. Awramik S.M., Riding R. Role of algal eukaryotes in subtidal columnar stromatolite formation. Proc. Natl. Acad. Sci. USA 1988, 85:1327-1329.
8. Badger M.R., Price G.D. The role of carbonic anhydrase in photosynthesis. Annu. Rev. Plant Physiol. Plant Mol. Biol. 1994, 45:369-392.
9. Barnes I. Geochemistry of Birch Creek, Inyo County, California-a travertine depositing creek in an arid climate. Geochim. Cosmochim. Acta 1965, 29:85-112.
10. Bissett A., de Beer D., Schoon R., Shiraishi F., Reimer A., Arp G. Microbial mediation of stromatolite formation in karst-water creeks. Limnol. Oceanogr. 2008, 53:1159-1168.
11. Bissett A., Reimer A., de Beer D., Shiraishi F., Arp G. Metabolic microenvironmental control by photosynthetic biofilms under changing macroenvironmental temperature and pH. Appl. Environ. Microbiol. 2008, 74:6306-6312.
12. Broecker W.S., Peng T.H. Gas exchange rates between air and sea. Tellus 1974, 26:21-35.
13. Chen J., Zhang D.D., Wang S., Xiao T., Huang R. Factors controlling tufa deposition in natural waters at waterfall sites. Sed. Geol. 2004, 166:353-366.
14. Daims H., Bruhl A., Amann R., Schleifer K.H., Wanger M. The domain-specific probe EUB338 is insufficient for the detection of all bacteria: development and evaluation of a more comprehensive probe set. Syst. Appl. Microbiol. 1999, 22:434-444.
15. Dandurand J.L., Gout R., Hoefs J., Menschel G., Schott J., Usdowski E. Kinetically controlled variation of major components and carbon and oxygen isotopes in a calcite-precipitating spring. Chem. Geol. 1982, 36:299-315.
16. Dreybrodt W., Buhmann D. A mass transfer model for dissolution and precipitation of calcite from solutions in turbulent motion. Chem. Geol. 1991, 90:107-122.
17. 2 outgassing: field measurements of precipitation rates in comparison to theoretical predictions. Chem. Geol. 1992, 97:285-294.
18. Ford T.D., Pedley H.M. A review of tufa and travertine deposits of the world. Earth Sci. Rev. 1996, 41:117-175.
19. Gieseke A., de Beer D. Use of microelectrodes to measure in situ microbial activities in biofilms, sediments, and microbial mats. Molecular Microbial Ecology Manual 2004, 1581-1612. Springer-Verlag, Berlin, Heidelberg. second ed. G.G. Kowalchuk, F.J. de Bruijn, I.M. Head, A.D. Akkermans, J.D. van Elsas (Eds.).
20. Golubic S. The relationship between blue-green algae and carbonate deposits. Bot. Monogr. 9 1973, 434-472. Blackwell, Oxford. N.G. Carr, B.A. Whitton (Eds.).
21. Grotzinger J.P., Knoll A.H. Stromatolites in Precambrian carbonates: evolutionary mileposts or environmental dipsticks?. Annu. Rev. Earth Planet. Sci. 1999, 27:313-358.
22. Hori M., Kano A. Tufa in oga limestone plateau, okayama prefecture: its developmental conditions and annual lamination. J. Geol. Soc. Jpn. 2006, 112:491-502.
23. Hori M., Hoshino K., Okumura K., Kano A. Seasonal patterns of carbon chemistry and isotopes in tufa depositing groundwaters of southwestern Japan. Geochim. Cosmochim. Acta 2008, 72:480-492.
24. Hori M., Kawai T., Matsuoka J., Kano A. Intra-annual perturbations of stable isotopes in tufas: effects of hydrological processes. Geochim. Cosmochim. Acta 2009, 73:1684-1695.
25. Ihlenfeld C., Norman M., Gagan M., Drysdale R., Maas R., Webb J. Climatic significance of seasonal trace element and stable isotope variations in a modern freshwater tufa. Geochim. Cosmochim. Acta 2003, 67:2341-2357.
26. Jacobson R.L., Usdowski E. Geochemical controls on a calcite precipitating spring. Contrib. Mineral. Petrol. 1975, 51:65-74.
27. Jørgensen B.B., Revsbech N.P. Diffusive boundary layers and the oxygen uptake of sediments and detritus. Limnol. Oceanogr. 1985, 30:111-122.
28. Kano A., Fujii H. Origin of the gross morphorogy and internal texture of tufas of Shirokawa Town, Ehime Prefecture, southwestern Japan. J. Geol. Soc. Jpn. 2000, 106:397-412.
29. Kano A., Kambayashi T., Fujii H., Matsuoka J., Sakuma K., Ihara T. Seasonal variation in water chemistry and hydrological conditions of tufa deposition of Shirokawa, Ehime Prefecture, southwestern Japan. J. Geol. Soc. Jpn. 1999, 105:289-304.
30. Kano A., Matsuoka J., Kojo T., Fujii H. Origin of annual laminations in tufa deposits, southwest Japan. Palaeogeogr. Palaeoclimatol. Palaeoecol. 2003, 191:243-262.
31. Kano A., Kawai T., Matsuoka J., Ihara T. High-resolution records of rainfall events from clay bands in tufa. Geology 2004, 32:793-796.
32. Kano A., Hagiwara R., Kawai T., Hori M., Matsuoka J. Climatic conditions and hydrological change recorded in a high-resolution stable isotope profile of a recent laminated tufa on a subtropical island, southern Japan. J. Sed. Res. 2007, 77:59-67.
33. Kawai T., Kano A., Matsuoka J., Ihara T. Seasonal variation in water chemistry and depositional processes in a tufa-bearing stream in SW-Japan, based on 5years of monthly observations. Chem. Geol. 2006, 232:33-53.
34. Kawai T., Kano A., Hori M. Geochemical and hydrological controls on biannual lamination of tufa deposits. Sed. Geol. 2009, 213:41-50.
35. Li Y.H., Gregory S. Diffusion of ions in sea water and in deep-sea sediments. Geochim. Cosmochim. Acta 1974, 38:703-714.
36. Liu Z., Svensson U., Dreybrodt W., Yuan D., Buhmann D. Hydrodynamic control of inorganic calcite precipitation in Huanglong Ravine, China: field measurements and theoretical prediction of deposition rates. Geochim. Cosmochim. Acta 1995, 59:3087-3097.
37. Matsuoka J., Kano A., Oba T., Watanabe T., Sakai S., Seto K. Seasonal variation of stable isotopic compositions recorded in a laminated tufa, SW Japan. Earth Planet. Sci. Lett. 2001, 192:31-44.
38. Merz-Preiß M., Riding R. Cyanobacterial tufa calcification in two freshwater streams: ambient environment, chemical thresholds and biological processes. Sed. Geol. 1999, 126:103-124.
39. Parkhurst D. L., and Appelo C. A. J. (1999) User's guide to PHREEQC (version 2) - a computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations. Water-Resources Investigations Report 99-4259, US Geological Survey, Denver.
40. Pazdur A., Pazdur M.F., Starkel L., Szulc J. Stable isotopes of Holocene calcareous tufa in southern Poland as paleoclimatic indicators. Quatern. Res. 1988, 30:177-189.
41. Pedley M. Ambient temperature freshwater microbial tufas. Microbial Sediments 2000, 179-186. Springer-Verlag, Berlin, Heidelberg. R. Riding, S.M. Awramik (Eds.).
42. Pentecost A., Riding R. Calcification of cyanobacteria. Systematic Association Spec. 1986, vol. 30:73-90. Clarendon Press, Oxford. B.S.C. Leadbeater, R. Riding (Eds.).
43. Riding R. Cyanobacterial calcification, carbon dioxide concentrating mechanisms, and Proterozoic-Cambrian changes in atmospheric composition. Geobiology 2006, 4:299-316.
44. Riding R. Marrying stromatolite perspectives: 3500 million year of history and a century of research. Abstract Volume of International Kalkowsky-Symposium 2008, 29-30. Universitätsdrucke Göttingen, Göttingen. J. Reitner, N.V. Quéric, M. Reich (Eds.).
45. Rogerson M., Pedley H.M., Wadhawan J.D., Middleton R. New insight into biological influence on the geochemistry of freshwater carbonate deposits. Geochim. Cosmochim. Acta 2008, 72:4976-4987.
46. Shiraishi F., Bissett A., de Beer D., Reimer A., Arp G. Photosynthesis, respiration and exopolymer calcium-binding in biofilm calcification (Westerhöfer and Deinschwanger Creek, Germany). Geomicrobiol. J. 2008, 25:83-94.
47. Shiraishi F., Reimer A., Bissett A., de Beer D., Arp G. Microbial effects on biofilm calcification, ambient water chemistry and stable isotope records (Westerhöfer Bach, Germany). Palaeogeogr. Palaeoclimatol. Palaeoecol. 2008, 262:84-99.
48. Shiraishi F., Zippel B., Neu T.R., Arp G. In situ detection of bacteria in calcified biofilms using FISH and CARD-FISH. J. Microbiol. Methods 2008, 74:6306-6312.
49. Sueoka M., Kano A., Kojo T., Matsuoka J., Ihara T. Characteristics of tufas developed in the western Tokuno-shima, southern Japan. J. Geol. Soc. Jpn. 2002, 108:153-163.
50. 3 precipitation. Earth Planet. Sci. Lett. 1979, 42:267-276.
51. 2 in natural waters and its role in extensive tufa deposition in the Huanglong Ravines, Sichuan, China. Chem. Geol. 2004, 205:141-153.
52. Zhang D.D., Zhang Y., Zhu A., Cheng X. Physical mechanisms of river waterfall tufa (travertine) formation. J. Sed. Res. 2001, 71:205-216.