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Volumn 48, Issue 8, 2010, Pages 2852-2858

Evaluation of the Roche Cobas Ampliprep/Cobas Taqman HIV-1 test and identification of rare polymorphisms potentially affecting assay performance

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CLINICAL ARTICLE; CONTROLLED STUDY; DNA DETERMINATION; GENE AMPLIFICATION; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; PRIORITY JOURNAL; QUALITY CONTROL; REPRODUCIBILITY; SENSITIVITY ANALYSIS; VIRUS LOAD; BASE MISPAIRING; CLASSIFICATION; DIAGNOSTIC ERROR; DIAGNOSTIC KIT; EVALUATION STUDY; GENETICS; GENOTYPE; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; ISOLATION AND PURIFICATION; MOLECULAR DIAGNOSIS; OLIGONUCLEOTIDE PROBE; PROCEDURES; SENSITIVITY AND SPECIFICITY; VIROLOGY;

EID: 77955463859     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00776-10     Document Type: Article
Times cited : (19)

References (17)
  • 1
    • 84908219488 scopus 로고
    • Statistical methods for assessing agreement between two methods of clinical measurement
    • PII S0140673686908378
    • Bland, J. M., and D. G. Altman. 1986. Statistical methods for assessing agreement between two methods of clinical measurement. Lancet i:307-310. (Pubitemid 16134762)
    • (1986) Lancet , vol.1 , Issue.8476 , pp. 307-310
    • Bland, J.M.1    Altman, D.G.2
  • 3
    • 35348823156 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 (HIV-1) plasma load discrepancies between the Roche COBAS AMPLICOR HIV-1 MONITOR version 1.5 and the Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 assays
    • Damond, F., B. Roquebert, A. Bénard, G. Collin, M. Miceli, P. Yéni, F. Brun-Vezinet, and D. Descamps. 2007. Human immunodeficiency virus type 1 (HIV-1) plasma load discrepancies between the Roche COBAS AMPLICOR HIV-1 MONITOR version 1.5 and the Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 assays. J. Clin. Microbiol. 45: 3436-3438.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 3436-3438
    • Damond, F.1    Roquebert, B.2    Bénard, A.3    Collin, G.4    Miceli, M.5    Yéni, P.6    Brun-Vezinet, F.7    Descamps, D.8
  • 4
    • 70449625248 scopus 로고    scopus 로고
    • Clinical and resistance consequences of misquantification of plasma and cerebrospinal fluid human immunodeficiency virus type 1 (HIV-1) RNA in an HIV-1 subtype G-infected patient
    • Delaugerre, C., B. Denis, G. Peytavin, P. Palmer, T. Mourez, J. Le Goff, J. Molina, and F. Simon. 2009. Clinical and resistance consequences of misquantification of plasma and cerebrospinal fluid human immunodeficiency virus type 1 (HIV-1) RNA in an HIV-1 subtype G-infected patient. J. Clin. Microbiol. 47:3763-3764.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 3763-3764
    • Delaugerre, C.1    Denis, B.2    Peytavin, G.3    Palmer, P.4    Mourez, T.5    Le Goff, J.6    Molina, J.7    Simon, F.8
  • 5
    • 33747200876 scopus 로고    scopus 로고
    • Comparison of the LCx human immunodeficiency virus (HIV) RNA Quantitative, RealTime HIV, and COBAS AmpliPrep-COBAS TaqMan assays for quantitation of HIV type 1 RNA in plasma
    • Foulongne, V., B. Montes, M.-N. Didelot-Rousseau, and M. Segondy. 2006. Comparison of the LCx human immunodeficiency virus (HIV) RNA Quantitative, RealTime HIV, and COBAS AmpliPrep-COBAS TaqMan assays for quantitation of HIV type 1 RNA in plasma. J. Clin. Microbiol. 44:2963-2966.
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 2963-2966
    • Foulongne, V.1    Montes, B.2    Didelot-Rousseau, M.-N.3    Segondy, M.4
  • 6
    • 0242668393 scopus 로고    scopus 로고
    • Failure to detect a non-B HIV-1 subtype by the HIV-1 amplicor monitor test, version 1.5: A case of unexpected vertical transmission [3]
    • DOI 10.1097/00002030-200303280-00027
    • Geelen, S., J. Lange, J. Borleffs, T. Wolfs, A. Weersink, and R. Schuurman. 2003. Failure to detect a non-B HIV-1 subtype by the HIV-1 Amplicor Monitor test, version 1.5: a case of unexpected vertical transmission. AIDS 17:781-782. (Pubitemid 36521095)
    • (2003) AIDS , vol.17 , Issue.5 , pp. 781-782
    • Geelen, S.1    Lange, J.2    Borleffs, J.3    Wolfs, T.4    Weersink, A.5    Schuurman, R.6
  • 8
    • 53649083887 scopus 로고    scopus 로고
    • Performance of three commercial viral load assays, Versant human immunodeficiency virus type 1 (HIV-1) RNA bDNA v3.0, Cobas AmpliPrep/Cobas TaqMan HIV-1, and NucliSens HIV-1 EasyQ v1.2, testing HIV-1 non-B subtypes and recombinant variants
    • Holguín, A., M. López, M. Molinero, and V. Soriano. 2008. Performance of three commercial viral load assays, Versant human immunodeficiency virus type 1 (HIV-1) RNA bDNA v3.0, Cobas AmpliPrep/Cobas TaqMan HIV-1, and NucliSens HIV-1 EasyQ v1.2, testing HIV-1 non-B subtypes and recombinant variants. J. Clin. Microbiol. 46:2918-2923.
    • (2008) J. Clin. Microbiol. , vol.46 , pp. 2918-2923
    • Holguín, A.1    López, M.2    Molinero, M.3    Soriano, V.4
  • 9
    • 30644456415 scopus 로고    scopus 로고
    • Evaluation of the clinical sensitivity for the quantification of human immunodeficiency virus type 1 RNA in plasma: Comparison of the new COBAS TaqMan HIV-1 with three current HIVRNA assays - LCx HIV RNA quantitative, VERSANT HIV-1 RNA 3.0 (bDNA) and COBAS Amplicor HIV-1 Monitor v1.5
    • Katsoulidou, A., M. Petrodaskalaki, V. Sypsa, E. Papachristou, C. G. Anastassopoulou, P. Gargalianos, A. Karafoulidou, M. Lazanas, T. Kordossis, A. Andoniadou, and A. Hatzakis. 2006. Evaluation of the clinical sensitivity for the quantification of human immunodeficiency virus type 1 RNA in plasma: comparison of the new COBAS TaqMan HIV-1 with three current HIVRNA assays - LCx HIV RNA quantitative, VERSANT HIV-1 RNA 3.0 (bDNA) and COBAS Amplicor HIV-1 Monitor v1.5. J. Virol. Methods 131:168-174.
    • (2006) J. Virol. Methods , vol.131 , pp. 168-174
    • Katsoulidou, A.1    Petrodaskalaki, M.2    Sypsa, V.3    Papachristou, E.4    Anastassopoulou, C.G.5    Gargalianos, P.6    Karafoulidou, A.7    Lazanas, M.8    Kordossis, T.9    Andoniadou, A.10    Hatzakis, A.11
  • 10
    • 38549170656 scopus 로고    scopus 로고
    • Identification of a novel HIV type 1 subtype H/J recombinant in Canada with discordant HIV viral load (RNA) values in three different commercial assays
    • Kim, J. E., B. Beckthold, Z. Chen, J. Mihowich, L. Malloch, and M. J. Gill. 2007. Identification of a novel HIV type 1 subtype H/J recombinant in Canada with discordant HIV viral load (RNA) values in three different commercial assays. AIDS Res. Hum. Retroviruses 23:1309-1313.
    • (2007) AIDS Res. Hum. Retroviruses , vol.23 , pp. 1309-1313
    • Kim, J.E.1    Beckthold, B.2    Chen, Z.3    Mihowich, J.4    Malloch, L.5    Gill, M.J.6
  • 11
    • 65249103899 scopus 로고    scopus 로고
    • Single-point mutations causing more than 100-fold underestimation of human immunodeficiency virus type 1 (HIV-1) load with the Cobas TaqMan HIV-1 real-time PCR assay
    • Korn, K., B. Weissbrich, C. Henke-Gendo, A. Heim, C. M. Jauer, N. Taylor, and J. Eberle. 2009. Single-point mutations causing more than 100-fold underestimation of human immunodeficiency virus type 1 (HIV-1) load with the Cobas TaqMan HIV-1 real-time PCR assay. J. Clin. Microbiol. 47:1238-1240.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 1238-1240
    • Korn, K.1    Weissbrich, B.2    Henke-Gendo, C.3    Heim, A.4    Jauer, C.M.5    Taylor, N.6    Eberle, J.7
  • 12
    • 36349034685 scopus 로고    scopus 로고
    • Comparative evaluation of the automated Roche TaqMan real-time quantitative human immunodeficiency virus type 1 RNA PCR assay and the Roche AMPLICOR version 1.5 conventional PCR assay
    • Oliver, A. R., S. F. Pereira, and D. A. Clark. 2007. Comparative evaluation of the automated Roche TaqMan real-time quantitative human immunodeficiency virus type 1 RNA PCR assay and the Roche AMPLICOR version 1.5 conventional PCR assay. J. Clin. Microbiol. 45:3616-3619.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 3616-3619
    • Oliver, A.R.1    Pereira, S.F.2    Clark, D.A.3
  • 13
    • 0036471553 scopus 로고    scopus 로고
    • Estimated global distribution and regional spread of HIV-1 genetic subtypes in the year 2000
    • and the WHO-UNAIDS Network for HIV Isolation and Characterization
    • Osmanov, S., C. Pattou, N. Waler, B. Schwardländer, J. Esparza, and the WHO-UNAIDS Network for HIV Isolation and Characterization. 2002. Estimated global distribution and regional spread of HIV-1 genetic subtypes in the year 2000. J. Acquir. Immune Defic. Syndr. 29:184-190.
    • (2002) J. Acquir. Immune Defic. Syndr. , vol.29 , pp. 184-190
    • Osmanov, S.1    Pattou, C.2    Waler, N.3    Schwardländer, B.4    Esparza, J.5
  • 14
    • 69249097519 scopus 로고    scopus 로고
    • Evaluation of the Abbott investigational use only RealTime HIV-1 assay and comparison to the Roche Amplicor HIV-1 monitor test
    • version 1.5
    • Pyne, M. T., E. Q. Konnick, A. Phansalkar, and D. R. Hillyard. 2009. Evaluation of the Abbott investigational use only RealTime HIV-1 assay and comparison to the Roche Amplicor HIV-1 monitor test, version 1.5. J. Mol. Diagn. 11:347-354.
    • (2009) J. Mol. Diagn. , vol.11 , pp. 347-354
    • Pyne, M.T.1    Konnick, E.Q.2    Phansalkar, A.3    Hillyard, D.R.4
  • 15
    • 33947141044 scopus 로고    scopus 로고
    • Fully automated quantification of human immunodeficiency virus (HIV) type 1 RNA in human plasma by the COBAS AmpliPrep/COBAS Taqman system
    • Schumacher, W., E. Frick, M. Kauselmann, V. Maier-Hoyle, R. van der Vliet, and R. Babiel. 2007. Fully automated quantification of human immunodeficiency virus (HIV) type 1 RNA in human plasma by the COBAS AmpliPrep/COBAS Taqman system. J. Clin. Virol. 38:304-312.
    • (2007) J. Clin. Virol. , vol.38 , pp. 304-312
    • Schumacher, W.1    Frick, E.2    Kauselmann, M.3    Maier-Hoyle, V.4    Van Der Vliet, R.5    Babiel, R.6
  • 16
    • 46949096989 scopus 로고    scopus 로고
    • Comparison of the Abbott Realtime HIV-1 and HCV viral load assays with commercial competitor assays
    • Schutten, M. 2008. Comparison of the Abbott Realtime HIV-1 and HCV viral load assays with commercial competitor assays. Expert Rev. Mol. Diagn. 8:369-377.
    • (2008) Expert Rev. Mol. Diagn. , vol.8 , pp. 369-377
    • Schutten, M.1
  • 17
    • 34447280788 scopus 로고    scopus 로고
    • Comparison of the Roche COBAS Amplicor Monitor, Roche COBAS Ampliprep/COBAS Taqman and Abbott RealTime test assays for quantification of hepatitis C virus and HIV RNA
    • Wolff, D., and A. Gerritzen. 2007. Comparison of the Roche COBAS Amplicor Monitor, Roche COBAS Ampliprep/COBAS Taqman and Abbott RealTime test assays for quantification of hepatitis C virus and HIV RNA. Clin. Chem. Lab. Med. 45:917-922.
    • (2007) Clin. Chem. Lab. Med. , vol.45 , pp. 917-922
    • Wolff, D.1    Gerritzen, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.