Screening of IR50 × Rathu Heenati F7 RILs and identification of SSR markers linked to Brown planthopper (Nilaparvata lugens Stål) resistance in rice (Oryza sativa L.)

Molecular Biotechnology

Volumn 46, Issue 1, 2010, Pages 63-71

  Kumari, Sanju ^a   M Sheba, Jennifer ^a   Marappan, Maheshwaran ^a   Ponnuswamy, Shanmugasunderam ^a   Seetharaman, Suresh ^a   Pothi, Nagarajan ^a   Subbarayalu, Mohankumar ^a   Raveendran, Muthurajan ^a   Natesan, Senthil ^a  

^a TAMIL NADU AGRICULTURAL UNIVERSITY   (India)

Author keywords

Brown planthopper; Marker assisted selection; Quantitative trait loci; Recombinant Inbred lines; Simple sequence repeat; Standard seedbox screening test

Indexed keywords

ANIMALS; BIOMARKERS; DNA SEQUENCES; GENES;

BROWN PLANTHOPPER; MARKER-ASSISTED SELECTION; QUANTITATIVE TRAIT LOCUS; RECOMBINANT INBRED LINES; SCREENING TESTS; SIMPLE SEQUENCE REPEATS;

PLANTS (BOTANY);

GENOMIC DNA; MOLECULAR MARKER; PRIMER DNA;

ARTICLE; CONTROLLED STUDY; CULTIVAR; CULTIVAR IDENTIFICATION; GENETIC LINKAGE; GENETIC POLYMORPHISM; GENETIC RESISTANCE; GENETIC SCREENING; GENOTYPE; GREENHOUSE; INSECT; MARKER ASSISTED BREEDING; MOLECULAR CLONING; NILAPARVATA LUGENS; NONHUMAN; ORTHOPTERA; PHENOTYPE; RATHU HEENATI; RECOMBINANT INBRED STRAIN; RICE; SIMPLE SEQUENCE REPEAT; ANIMAL; CROSS BREEDING; GENETIC MARKER; GENETIC RECOMBINATION; GENETICS; HEMIPTERA; IMMUNOLOGY; INBREEDING; INNATE IMMUNITY; PARASITOLOGY; PHYSIOLOGY; PLANT DISEASE; PLANT GENE; QUANTITATIVE TRAIT LOCUS; VARIABLE NUMBER OF TANDEM REPEAT;

HEXAPODA; LUDWIGIA ALTERNIFOLIA; NILAPARVATA LUGENS; ORYZA SATIVA;

ANIMALS; CROSSES, GENETIC; GENES, PLANT; GENETIC MARKERS; GENETIC TESTING; GENOTYPE; HEMIPTERA; IMMUNITY, INNATE; INBREEDING; LINKAGE (GENETICS); MINISATELLITE REPEATS; ORYZA SATIVA; PLANT DISEASES; POLYMORPHISM, GENETIC; QUANTITATIVE TRAIT LOCI; RECOMBINATION, GENETIC;

EID: 77955417030     PISSN: 10736085     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12033-010-9279-0     Document Type: Article

References (44)

1. SN Alam MB Cohen 1998 Detection and analysis of QTLs for resistance to the brown planthopper, Nilaparvata lugens, in a doubled-haploid rice population Theoretical and Applied Genetics 97 1370 1379 10.1007/s001220051031 1:CAS:528:DyaK1MXltF2msQ%3D%3D (Pubitemid 29010001)
2. Ausubel, F. M., Brent, R., Kinston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., et al. (1994). Current protocols in molecular biology. New York: Wiley.
3. JM Bonman GS Khush RJ Nelson 1992 Breeding rice for resistance to pests Annual Review of Phytopathology 30 507 528 10.1146/annurev.py.30.090192.002451
4. W Buna H Zhen S Lihui R Xiang L Xiang L Xianghua H Guangcun 2001 Mapping of two new brown planthopper resistance genes from wild rice Chinese Science Bulletin 46 1092 1095 10.1007/BF02900685
5. JW Chen L Wang XF Pang QH Pan 2006 Genetic analysis and fine mapping of a rice brown planthopper (Nilaparvata lugens Stål) resistance gene bph19(t) Molecular Genetics and Genomics 275 321 329 10.1007/s00438-005-0088-2 1:CAS:528:DC%2BD28XjsVOltrY%3D
6. Gomathi, S. K. (2002). Identification of genetic locus associated with resistance to brown planthopper (Nilaparvata lugens Stål) in rice (Oryza sativa L.). PhD Thesis, Tamil Nadu Agricultural University, Coimbatore.
7. Heinrichs, E. A. (1979). Control of leafhopper and planthopper vectors of rice viruses. In K. Moramorosch & K. F. Arris (Eds.), Leafhopper vectors and planthopper disease agents (pp. 529-558). New York: Academic Press.
8. Heinrichs, E. A., Medrano, F. G., & Rapusas, H. R. (1985). Genetic evaluation for insect resistance in rice (p. 365). Manila, Philippines: International Rice Research Institute.
9. Hirabayashi, H., Kaji, R., Angeles, E. R., Ogawa, T., Brar, D. S., & Khush, G. S. (1999). RFLP analysis of a new gene for resistance to brown planthopper derived from O. officinalis on rice chromosome 4. Breeding Science, 49 (Suppl. 1), 48. (abstract in Japanese).
10. Hirabayashi, H., Kaji R., Okamoto M., Ogawa, T., Brar, D. S., Angeles, E. R., & Khush, G. S. (1998). Mapping QTLs for brown planthopper (BPH) resistance introgressed from Oryza officinalis in rice. Advances in rice genetics, 268-270.
11. Z Huang G He L Shu X Li Q Zhang 2001 Identification and mapping of two brown planthopper resistance genes in rice Theoretical and Applied Genetics 102 929 934 10.1007/s001220000455 1:CAS:528:DC%2BD3MXlt1Skur8%3D (Pubitemid 32532694)
12. R Ikeda 1985 Studies on the inheritance of resistance to the rice brown planthopper (Nilaparvata lugens Stål) and the breeding of resistant rice cultivars Bulletin of National Agricultural Research Centre 3 1 54 (in Japanese)
13. R Ikeda C Kaneda 1981 Genetic analysis of resistance to brown planthopper, Nilaparvata lugens Stål, in rice Japanese Journal of Breeding 31 279 285
14. IRRI. (1988). Standard evaluation systems for rice. International Rice Research Institute, Manila, Philippines.
15. T Ishii DS Brar DS Multani GS Khush 1994 Molecular tagging of genes for brown planthopper resistance and earliness introgressed from Oryza australiensis into cultivated rice, O. sativa Genome 37 217 221 10.1139/g94-030 1:CAS:528:DyaK2cXmslegtbc%3D
16. J Jairin K Phengrat S Teangdeerith A Vanavichit T Toojinda 2007 Mapping of broad spectrum brown planthopper resistance gene, Bph3, on rice chromosome 6 Molecular Breeding 19 35 44 10.1007/s11032-006-9040-3 1:CAS:528: DC%2BD28XhtlGktbjF (Pubitemid 46034283)
17. J Jairin S Teangdeerith P Leelagud K Phengrat A Vanavichit T Toojinda 2007 Physical mapping of Bph3, a brown planthopper resistance locus in rice Maejo International Journal of Science and Technology 01 166 177 1:CAS:528:DC%2BD2sXhtleqtL7M
18. KK Jena JU Jeung JH Lee HC Choi DS Brar 2006 High-resolution mapping of a new brown planthopper (BPH) resistance gene, Bph 18(t). and marker assisted selection for BPH resistance in rice (Oryza sativa L.) Theoretical and Applied Genetics 112 288 297 10.1007/s00122-005-0127-8 1:CAS:528:DC%2BD2MXhtlajsrzF (Pubitemid 41813197)
19. KK Jena GS Khush 1990 Introgression of genes from Oryza officinalis Well ex. Watt to cultivated rice, O. sativa L Theoretical and Applied Genetics 80 737 745 10.1007/BF00224186
20. KK Jena IC Pasalu YK Rao Y Varalaxmi K Krishnaiah GS Khush G Kochert 2002 Molecular tagging of a gene for resistance to brown planthopper in rice (Oryza sativa L.) Eyphytica 129 81 88 10.1023/A:1021590025240
21. 4 families of IR50/Rathu Heenati of rice (Oryza sativa L.). PhD Thesis, Tamil Nadu Agricultural University, Coimbatore.
22. MA Kabir GS Khush 1988 Genetic analysis of resistance of brown planthoppers in rice, Oryza sativa L Plant Breeding 100 54 58 10.1111/j.1439-0523.1988.tb00216.x
23. M Kawaguchi K Murata T Ishii S Takumi N Mori C Nakamura 2001 Assignment of a brown planthopper (Nilaparvata lugens Stål.) resistance gene bph4 to the rice chromosome 6 Breeding Science 51 13 18 10.1270/jsbbs.51.13 1:CAS:528:DC%2BD3MXjsFShu7s%3D (Pubitemid 32235304)
24. Khush, G.S. (1979).Genetics of and breeding resistance to the brown planthopper. In Brown planthopper : Threat to rice production in Asia (pp. 321-332). Los Banos, Philippines: IRRI.
25. GS Khush DS Brar 1991 Genetics of resistance to insects in crop plants Advances in Agronomy 45 223 274 10.1016/S0065-2113(08)60042-5
26. GS Khush ANMR Karim ER Angeles 1985 Genetics of resistance of rice cultivar ARC 10550 to Bangladesh brown planthopper biotype Journal of Genetics 64 121 125 10.1007/BF02931140
27. A Lakshminarayana GS Khush 1977 New genes for resistance to brown planthopper in rice Crop Science 17 96 100 10.2135/cropsci1977. 0011183X001700010028x
28. CR Martinez GS Khush 1974 Sources and inheritance of resistance to brown planthopper in some breeding lines of rice (Oryza sativa L.) Crop Science 14 264 267 10.2135/cropsci1974.0011183X001400020029x
29. KKM Myint M Matsumura M Takagi H Yasui 2009 Demographic parameters of long-term laboratory strains of the brown planthopper, Nilaparvata lugens stål, (Homoptera: Delphacidae) on resistance genes, bph20(t) and Bph21(t) in rice Journal of the Faculty of Agriculture Kyushu University 54 1 159 164 1:CAS:528:DC%2BD1MXmtVKrt7o%3D
30. H Nemoto R Ikeda C Kaneda 1989 New genes for resistance to brown planthopper, Nilaparvata lugens Stål, in rice Japanese Journal of Breeding 39 23 28 1:CAS:528:DyaL1MXkslCqsLs%3D
31. Panda, N., & Khush, G. S. (1995). Host plant resistance to insects. London, UK: CAB International.
32. ML Rahman W Jiang SH Chu Y Qiao TH Ham MK Woo J Lee MS Khanam JH Chin JU Jeung DS Brar KK Jena HJ Koh 2009 High-resolution mapping of two rice brown planthopper resistance genes, Bph20(t) and Bph21(t), originating from Oryza minuta Theoretical and Applied Genetics 119 1237 1246 10.1007/s00122-009-1125-z
33. J Ramalingam CMV Cruz K Kukereja JM Chittor JL Wu SW Lee M Baraodian ML George MB Cohen SH Hulbert JE Leach H Leung 2003 Candidate defence genes from rice, barley, and maize and their association with qualitative resistance in rice Molecular Plant-Microbe Interactions 16 14 24 10.1094/MPMI.2003.16.1.14 1:CAS:528:DC%2BD38XpvVWgs7w%3D
34. X Ren X Wang X Yuan Q Weng L Zhu G He 2004 Mapping quantitative trait loci and expressed sequence tags related to brown planthopper resistance in rice Plant Breeding 123 342 348 10.1111/j.1439-0523.2004.01003.x 1:CAS:528:DC%2BD2cXnsVagur4%3D (Pubitemid 39059489)
35. K Renganayaki AK Friz S Sadasivam S Pammi SE Harrington SR McCouch SM Kumar AS Reddy 2002 Mapping and progress toward map-based cloning of brown planthopper biotype-4 resistance gene introgressed from Oryza officinalis into cultivated rice, O. sativa Crop Science 42 2112 2117 10.2135/cropsci2002.2112 1:CAS:528:DC%2BD38XptlSjsb0%3D
36. PN Sharma Y Ketipearachchi K Murata A Torii S Takumi N Mori C Nakamura 2003 RFLP/AFLP mapping of a brown planthopper (Nilaparvata lugens Stål) resistance gene Bph1 in rice Euphytica 129 109 117 10.1023/A:1021514829783 1:CAS:528:DC%2BD38XpsVSkt74%3D (Pubitemid 36189111)
37. RP Soundararajan P Kadirvel K Gunathilagaraj M Maheswaran 2004 Mapping of quantitative trait loci associated with resistance to brown planthopper in rice by means of a doubled haploid population Crop Science 44 2214 2220 10.2135/cropsci2004.2214 1:CAS:528:DC%2BD2cXhtVKqsb3E
38. L Sun Y Liu L Jiang C Su C Wang H Zhai J Wan 2007 Identification of quantitative trait loci associated with resistance to brown planthopper in the indica rice cultivar Col.5 Thailand Hereditas 144 48 52 10.1111/j.2006.0018- 0661.01932.x (Pubitemid 47162127)
39. L Sun C Su C Wang H Zhai J Wan 2005 Mapping of a major resistance gene to the brown planthopper in the rice cultivar Rathu Heenati Breeding Science 55 391 396 10.1270/jsbbs.55.391 1:CAS:528:DC%2BD28XhsVekurY%3D (Pubitemid 41796316)
40. GX Tan QM Weng X Ren Z Huang L Zhu GC He 2004 Two whitebacked planthopper resistance genes in rice share the same loci with those for brown planthopper resistance Heredity 9 212 217 10.1038/sj.hdy.6800398 (Pubitemid 38427304)
41. XF Xu HW Mei LJ Luo XN Cheng ZK Li 2002 RFLP-facilitated investigation of the quantitative resistance of rice to brown planthopper (Nilaparvata lugens stål) Theoretical and Applied Genetics 104 248 253 10.1007/s00122-001- 0777-0 1:CAS:528:DC%2BD38XislOgsbw%3D (Pubitemid 36065051)
42. 2, backcross. Double haploid and recombinant inbred populations in rice (Oryza sativa L.) Theoretical and Applied Genetics 253 535 545 1:CAS:528:DyaK2sXit1OhtLo%3D
43. HY Yang AQ You ZF Yang F Zhang RF He LL Zhu GG He 2004 High resolution genetic mapping at the Bph15 locus for brown planthopper resistance in rice (Oryza sativa L.) Theoretical and Applied Genetics 110 182 191 10.1007/s00122-004-1844-0 1:CAS:528:DC%2BD2MXotVGrtQ%3D%3D (Pubitemid 40240650)
44. B Yarasi V Sadumpati CP Immanni DR Vudem VR Khareedu 2008 Transgenic rice expressing Allium sativum leaf agglutinin (ASAL) exhibits high-level resistance against major sap-sucking pests BMC Plant Biology. 8 102 115 10.1186/1471-2229-8-102