Multinomial inference on distributed responses in SPM

NeuroImage

Volumn 53, Issue 1, 2010, Pages 161-170

  Chumbley, J R ^a   Flandin, G ^a   Seghier, M L ^a   Friston, K J ^a  

^a WELLCOME TRUST CENTRE FOR NEUROIMAGING   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANISOTROPY; ARTICLE; BAYES THEOREM; BRAIN REGION; FUNCTIONAL MAGNETIC RESONANCE IMAGING; GEOMETRY; HEMISPHERIC DOMINANCE; HUMAN; LANGUAGE; POISSON DISTRIBUTION; PRIORITY JOURNAL; SIMULATION; STATISTICAL ANALYSIS; STATISTICAL MODEL; STATISTICAL PARAMETRIC MAP;

ADULT; ALGORITHMS; BRAIN; COMPUTER SIMULATION; EVOKED POTENTIALS; FEMALE; HUMANS; IMAGE ENHANCEMENT; IMAGE INTERPRETATION, COMPUTER-ASSISTED; LANGUAGE; MAGNETIC RESONANCE IMAGING; MALE; MODELS, NEUROLOGICAL; MODELS, STATISTICAL; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY;

EID: 77955306086     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2010.05.076     Document Type: Article

References (38)

1. Adler R.J., Hasofer A.M. The Geometry of Random Fields 1981, Wiley, New York.
2. Ashburner J., Friston K.J. Voxel-based morphometry - the methods. NeuroImage 2000, 11:805-821.
3. Cabeza R., Nyberg L. Imaging cognition II: an empirical review of 275 PET and fMRI studies. J. Cogn. Neurosci. 2000, 12:1-47.
4. Chumbley J.R., Worsley K.J., Flandin G., Friston K.J. Topological FDR for neuroimaging. NeuroImage 2010, 49(4):3057-3064.
5. Eickhoff S.B., Laird A.R., Grefkes C., Wang L.E., Zilles K., Fox P.T. Coordinate-based activation likelihood estimation meta-analysis of neuroimaging data: a random-effects approach based on empirical estimates of spatial uncertainty. Hum. Brain Mapp. 2009, 30(9):2907-2926.
6. Flitney D.E., Jenkinson M. Cluster analysis revisited. Tech. rept. Oxford Centre for Functional Magnetic Resonance Imaging of the Brain, Department of Clinical Neurology, Oxford University, Oxford, UK. TR00DF1 2000.
7. Flandin G., Kherif F., Pennec X., Malandain G., Ayache N., Poline J.-B. Improved detection sensitivity in functional MRI data using a brain parcelling technique. Medical Image Computing and Computer-Assisted Intervention (MICCAI'02), volume 2488 of LNCS 2002, 467-474. Tokyo, Japan.
8. Friston K.J., Frith C.D., Liddle P.F., Frackowiak R.S. Comparing functional (PET) images: the assessment of significant change. J. Cereb. Blood Flow Metab. 1991, 11(4):690-699.
9. Friston K.J., Worsley K.J., Frackowiak R.S.J., Mazziotta J.C., Evans A.C. Assessing the significance of focal activations using their spatial extent. Hum. Brain Mapp. 1994, 1:214-220.
10. Friston K.J., Holmes A., Poline J.B., Price C.J., Frith C.D. Detecting activations in PET and fMRI: levels of inference and power. NeuroImage 1996, 4(3 Pt 1):223-235. Dec.
11. Gelman A., Carlin J.B., Stern H.S., Rubin D.B. Bayesian Data Analysis 2004, Chapman and Hall/CRC, New York. second ed.
12. Hassabis D., Chu C., Rees G., Weiskopf N., Molyneux P.D., Maguire E.A. Decoding neuronal ensembles in the human hippocampus. Curr. Biol. 2009, 19(7):546-554.
13. Jeffreys H. An invariant form for the prior probability in estimation problems. Proc. R. Soc. Lond. Ser. A, Math. Phys. Sci. 1946, 186(1007):453-461.
14. Jeffreys H. The Theory of Probability 1961, The Oxford University Press.
15. Kiebel S.J., Poline J.B., Friston K.J., Holmes A.P., Worsley K.J. Robust smoothness estimation in statistical parametric maps using standardized residuals from the general linear model. NeuroImage 1999, 10(6):756-766.
16. Kilner JM and Friston KJ (2010) Topological inference for EEG and MEG. Ann. Applied Stat. under review.
17. Oldfield R.C. The assessment and analysis of handedness: the Edinburgh inventory. Neuropsychologia 1971, 9:97-113.
18. Paul S., Balasooriya U., Banerjee T. Fisher information matrix of the Dirichlet-multinomial distribution. Biomet. J. 2005, 47(2):230-236.
19. Poline J.-B., Mazoyer B.M. Enhanced detection in activation maps using a multi-filtering approach. J. Cereb. Blood Flow Metab. 1994, 14:690-699.
20. Poline J.-B., Mazoyer B.M. Analysis of individual brain activation maps using hierarchical description and multiscale detection. IEEE Trans. Med. Imaging 1994, 13(4):702-710.
21. Pujol J., Deus J., Losilla J.M., Capdevila A. Cerebral lateralization of language in normal left-handed people studied by functional MRI. Neurology 1999, 52:1038-1043.
22. Rasmussen C.E., Ghahramani Z. Occam's Razor. Advances in Neural Information Processing Systems 13 2000, MIT Press, (2001). T. Leen, T. Dietterich, V. Tresp (Eds.).
23. Smith S.M., Nichols T.E. Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference. NeuroImage 2009, 44(1):83-98.
24. Seghier M.L. Laterality index in functional MRI: methodological issues. Magn. Res. Imaging 2008, 26:594-601.
25. Seghier M.L., Lazeyras F., Pegna A.J., Annoni J.M., Zimine I., Mayer E., Michel C.M., Khateb A. Variability of fMRI activation during a phonological and semantic language task in healthy subjects. Hum. Brain Mapp. 2004, 23:140-155.
26. Seghier M.L., Price C.J. Dissociating functional brain networks by decoding the between-subject variability. Neuroimage 2009, 45:349-359.
27. Szaflarski J.P., Binder J.R., Possing E.T., McKiernan K.A., Ward B.D., Hammeke T.A. Language lateralization in left-handed and ambidextrous people: fMRI data. Neurology 2002, 59:238-244.
28. Taylor J.E., Worsley K.J. Detecting sparse cone alternatives for Gaussian random fields, with an application to brain mapping. J. Am. Stat. Assoc. 2007, 102:913-928.
29. Thirion B., Pinel P., Tucholka A., Roche A., Ciuciu P., Mangin J.F., Poline J.B. Structural analysis of fMRI data revisited: improving the sensitivity and reliability of fMRI group studies. IEEE Trans. Med. Imaging 2007, 26(9).
30. Tripsiannis G.A., Philippou A.N., Papathanasiou A.A. Communications in statistics. Theory Methods 2002, 31(11):1899-1912.
31. Tzourio-Mazoyer N., Landeau B., Papathanassiou D., Crivello F., Etard O., Delcroix N., Mazoyer B., Joliot M. Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. NeuroImage 2002, 15(1):273-289.
32. Vigneau M., Beaucousin V., Herve P.Y., Duffau H., Crivello F., Houde O., Mazoyer B., Tzourio-Mazoyer N. Meta-analyzing left hemisphere language areas: phonology, semantics, and sentence processing. Neuroimage 2006, 30:1414-1432.
33. Wager T.D., Lindquist M.A., Nichols T.E., Kober H., Van Snellenberg J.X. Evaluating the consistency and specificity of neuroimaging data using meta-analysis. NeuroImage 2009, 45(1):S210-S221. Supplement 1.
34. Worsley K.J., Evans A.C., Marrett S., Neelin P. A three-dimensional statistical analysis for CBF activation studies in human brain. J. Cereb. Blood Flow Metab. 1992, 12:900-918.
35. Worsley K.J., Marrett S., Neelin P., Evans A.C. Searching scale space for activation in PET images. Hum. Brain Mapp. 1996, 4(1):74-90.
36. Worsley K.J., Andermann M., Koulis T., MacDonald D., Evans A.C. Detecting changes in nonisotropic images. Hum. Brain Mapp. 1999, 8:98-101.
37. Worsley K.J., Taylor J.E., Tomaiuolo F., Lerch J. Unified univariate and multivariate random field theory. NeuroImage 2004, 23(Suppl 1):S189-S195.
38. Xu L., Johnson T.D., Nichols T.E., Nee D.E. Modeling inter-subject variability in fMRI activation location: a Bayesian hierarchical spatial model. Biometrics 2009, 65:1041-1051.