-
1
-
-
0002949107
-
The possible nutritional or detoxification role of the epibiotic bacteria of alvinellid polychaetes: review of current data
-
Alayse-Danet AM, Desbruyères D, Gaill F. The possible nutritional or detoxification role of the epibiotic bacteria of alvinellid polychaetes: review of current data. Symbiosis 1987, 4:51-62.
-
(1987)
Symbiosis
, vol.4
, pp. 51-62
-
-
Alayse-Danet, A.M.1
Desbruyères, D.2
Gaill, F.3
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
77955302385
-
Molecular characterization of the symbionts associated with marine nematodes of the genus Robbea
-
Bayer C, Heindl NR, Rinke C, Lücker S, Ott JA, Bulgheresi S. Molecular characterization of the symbionts associated with marine nematodes of the genus Robbea. Environ Microbiol Rep 2009, 1:136-144.
-
(2009)
Environ Microbiol Rep
, vol.1
, pp. 136-144
-
-
Bayer, C.1
Heindl, N.R.2
Rinke, C.3
Lücker, S.4
Ott, J.A.5
Bulgheresi, S.6
-
4
-
-
33747335397
-
Phylogeny of 16S rRNA, ribulose 1,5-bisphosphate carboxylase/oxygenase, and adenosine 5'-phosphosulfate reductase genes from gamma- and alphaproteobacterial symbionts in gutless marine worms (Oligochaeta) from Bermuda and the Bahamas
-
Blazejak A, Kuever J, Erséus C, Amann R, Dubilier N. Phylogeny of 16S rRNA, ribulose 1,5-bisphosphate carboxylase/oxygenase, and adenosine 5'-phosphosulfate reductase genes from gamma- and alphaproteobacterial symbionts in gutless marine worms (Oligochaeta) from Bermuda and the Bahamas. Appl Environ Microbiol 2006, 72:5527-5536.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5527-5536
-
-
Blazejak, A.1
Kuever, J.2
Erséus, C.3
Amann, R.4
Dubilier, N.5
-
5
-
-
0141816888
-
Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete
-
Campbell BJ, Stein JL, Cary SC. Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete. Appl Environ Microbiol 2003, 69:5070-5078.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 5070-5078
-
-
Campbell, B.J.1
Stein, J.L.2
Cary, S.C.3
-
6
-
-
33646827488
-
The versatile epsilon-proteobacteria: key players in sulphidic habitats
-
Campbell BJ, Engel AS, Porter ML, Takai K. The versatile epsilon-proteobacteria: key players in sulphidic habitats. Nat Rev Microbiol 2006, 4:458-468.
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 458-468
-
-
Campbell, B.J.1
Engel, A.S.2
Porter, M.L.3
Takai, K.4
-
7
-
-
0030950843
-
Epibiotic microorganisms on copepods and other marine crustaceans
-
Carman KR, Dobbs FC. Epibiotic microorganisms on copepods and other marine crustaceans. Microsc Res Tech 1997, 37:116-135.
-
(1997)
Microsc Res Tech
, vol.37
, pp. 116-135
-
-
Carman, K.R.1
Dobbs, F.C.2
-
8
-
-
33846072878
-
The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
-
Cole JR, Chai B, Farris RJ, Wang Q, Kulam-Syed-Mohideen AS, McGarrell DM. The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Res 2007, 35:D169-D172.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
Wang, Q.4
Kulam-Syed-Mohideen, A.S.5
McGarrell, D.M.6
et al7
-
9
-
-
0009658678
-
Nouvelle classification des Annélides sétigères abranches
-
d'Udekem J. Nouvelle classification des Annélides sétigères abranches. B Cl Sci Ac Roy Belg 1855, 22:533-555.
-
(1855)
B Cl Sci Ac Roy Belg
, vol.22
, pp. 533-555
-
-
d'Udekem, J.1
-
10
-
-
0344172842
-
The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set
-
Daims H, Bruhl A, Amann R, Schleifer KH, Wagner M. The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. Syst Appl Microbiol 1999, 22:434-444.
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 434-444
-
-
Daims, H.1
Bruhl, A.2
Amann, R.3
Schleifer, K.H.4
Wagner, M.5
-
11
-
-
68649111370
-
A novel symbiosis between chemoautotrophic bacteria and a freshwater cave amphipod
-
Dattagupta S, Schaperdoth I, Montanari A, Mariani S, Kita N, Valley JW, Macalady JL. A novel symbiosis between chemoautotrophic bacteria and a freshwater cave amphipod. ISME J 2009, 3:935-943.
-
(2009)
ISME J
, vol.3
, pp. 935-943
-
-
Dattagupta, S.1
Schaperdoth, I.2
Montanari, A.3
Mariani, S.4
Kita, N.5
Valley, J.W.6
Macalady, J.L.7
-
12
-
-
0000356297
-
Association of filamentous epibacteria with Tubificoides benedii (Oligochaeta, Annelida)
-
Dubilier N. Association of filamentous epibacteria with Tubificoides benedii (Oligochaeta, Annelida). Mar Biol 1986, 92:285-288.
-
(1986)
Mar Biol
, vol.92
, pp. 285-288
-
-
Dubilier, N.1
-
13
-
-
0028052656
-
Concomitant effects of sulfide and hypoxia on the aerobic metabolism of the marine oligochaete Tubificoides benedii
-
Dubilier N, Giere O, Grieshaber MK. Concomitant effects of sulfide and hypoxia on the aerobic metabolism of the marine oligochaete Tubificoides benedii. J Exp Zool 1994, 269:287-297.
-
(1994)
J Exp Zool
, vol.269
, pp. 287-297
-
-
Dubilier, N.1
Giere, O.2
Grieshaber, M.K.3
-
14
-
-
21844499108
-
Morphological and ecophysiological adaptations of the marine oligochaete Tubificoides benedii to sulfidic sediments
-
Dubilier N, Giere O, Grieshaber MK. Morphological and ecophysiological adaptations of the marine oligochaete Tubificoides benedii to sulfidic sediments. Am Zool 1995a, 35:163-173.
-
(1995)
Am Zool
, vol.35
, pp. 163-173
-
-
Dubilier, N.1
Giere, O.2
Grieshaber, M.K.3
-
15
-
-
0029014177
-
Characterization of chemoautotrophic bacterial symbionts in a gutless marine worm (Oligochaeta, Annelida) by phylogenetic 16S rRNA sequence analysis and in situ hybridization
-
Dubilier N, Giere O, Distel DL, Cavanaugh CM. Characterization of chemoautotrophic bacterial symbionts in a gutless marine worm (Oligochaeta, Annelida) by phylogenetic 16S rRNA sequence analysis and in situ hybridization. Appl Environ Microbiol 1995b, 61:2346-2350.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 2346-2350
-
-
Dubilier, N.1
Giere, O.2
Distel, D.L.3
Cavanaugh, C.M.4
-
16
-
-
0033577209
-
Phylogenetic diversity of bacterial endosymbionts in the gutless marine oligochete Olavius loisae (Annelida)
-
Dubilier N, Amann R, Erséus C, Muyzer G, Park SY, Giere O, Cavanaugh CM. Phylogenetic diversity of bacterial endosymbionts in the gutless marine oligochete Olavius loisae (Annelida). Mar Ecol Prog Ser 1999, 178:271-280.
-
(1999)
Mar Ecol Prog Ser
, vol.178
, pp. 271-280
-
-
Dubilier, N.1
Amann, R.2
Erséus, C.3
Muyzer, G.4
Park, S.Y.5
Giere, O.6
Cavanaugh, C.M.7
-
17
-
-
0342960381
-
Endosymbiotic sulphate-reducing and sulphide-oxidizing bacteria in an oligochaete worm
-
Dubilier N, Mulders C, Ferdelman T, de Beer D, Pernthaler A, Klein M. Endosymbiotic sulphate-reducing and sulphide-oxidizing bacteria in an oligochaete worm. Nature 2001, 411:298-302.
-
(2001)
Nature
, vol.411
, pp. 298-302
-
-
Dubilier, N.1
Mulders, C.2
Ferdelman, T.3
de Beer, D.4
Pernthaler, A.5
Klein, M.6
et al7
-
18
-
-
52049111640
-
Symbiotic diversity in marine animals: the art of harnessing chemosynthesis
-
Dubilier N, Bergin C, Lott C. Symbiotic diversity in marine animals: the art of harnessing chemosynthesis. Nat Rev Microbiol 2008, 6:725-740.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 725-740
-
-
Dubilier, N.1
Bergin, C.2
Lott, C.3
-
19
-
-
0035318376
-
Phylogenetic diversity of ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit genes from deep-sea microorganisms
-
Elsaied H, Naganuma T. Phylogenetic diversity of ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit genes from deep-sea microorganisms. Appl Environ Microbiol 2001, 67:1751-1765.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 1751-1765
-
-
Elsaied, H.1
Naganuma, T.2
-
20
-
-
69249208397
-
Origin of the Sox multienzyme complex system in ancient thermophilic bacteria and coevolution of its constituent proteins
-
Ghosh W, Mallick S, DasGupta SK. Origin of the Sox multienzyme complex system in ancient thermophilic bacteria and coevolution of its constituent proteins. Res Microbiol 2009, 160:409-420.
-
(2009)
Res Microbiol
, vol.160
, pp. 409-420
-
-
Ghosh, W.1
Mallick, S.2
DasGupta, S.K.3
-
21
-
-
33646570893
-
Ecology and biology of marine oligochaeta - an inventory rather than another review
-
Giere O. Ecology and biology of marine oligochaeta - an inventory rather than another review. Hydrobiologia 2006, 564:103-116.
-
(2006)
Hydrobiologia
, vol.564
, pp. 103-116
-
-
Giere, O.1
-
22
-
-
6744249112
-
Anatomy and ultrastructure of the marine oligochaete Tubificoides benedii (Tubificidae), with emphasis on its epidermis-cuticle-complex
-
Giere O, Rhode B. Anatomy and ultrastructure of the marine oligochaete Tubificoides benedii (Tubificidae), with emphasis on its epidermis-cuticle-complex. Hydrobiologia 1987, 155:159-159.
-
(1987)
Hydrobiologia
, vol.155
, pp. 159-159
-
-
Giere, O.1
Rhode, B.2
-
23
-
-
2942591999
-
Novel epibiotic Thiothrix bacterium on a marine amphipod
-
Gillan DC, Dubilier N. Novel epibiotic Thiothrix bacterium on a marine amphipod. Appl Environ Microbiol 2004, 70:3772-3775.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 3772-3775
-
-
Gillan, D.C.1
Dubilier, N.2
-
24
-
-
0027060898
-
Embryos of Homarus americanus are protected by epibiotic bacteria
-
Gil-Turnes MS, Fenical W. Embryos of Homarus americanus are protected by epibiotic bacteria. Biol Bull 1992, 182:105-108.
-
(1992)
Biol Bull
, vol.182
, pp. 105-108
-
-
Gil-Turnes, M.S.1
Fenical, W.2
-
25
-
-
77955301105
-
Indigenous ectosymbiotic bacteria associated with diverse hydrothermal vent invertebrates
-
Goffredi S. Indigenous ectosymbiotic bacteria associated with diverse hydrothermal vent invertebrates. Environ Microbiol Rep 2010, 2:313-321.
-
(2010)
Environ Microbiol Rep
, vol.2
, pp. 313-321
-
-
Goffredi, S.1
-
26
-
-
1642380571
-
Vesicomyid symbioses from Monterey Bay (Central California) cold seeps
-
Goffredi SK, Barry JP, Buck KR. Vesicomyid symbioses from Monterey Bay (Central California) cold seeps. Symbiosis 2004a, 36:1-27.
-
(2004)
Symbiosis
, vol.36
, pp. 1-27
-
-
Goffredi, S.K.1
Barry, J.P.2
Buck, K.R.3
-
27
-
-
2442680697
-
Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian Ocean
-
Goffredi SK, Waren A, Orphan VJ, Van Dover CL, Vrijenhoek RC. Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian Ocean. Appl Environ Microbiol 2004b, 70:3082-3090.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 3082-3090
-
-
Goffredi, S.K.1
Waren, A.2
Orphan, V.J.3
Van Dover, C.L.4
Vrijenhoek, R.C.5
-
28
-
-
51649088141
-
Epibiotic bacteria associated with the recently discovered Yeti crab, Kiwa hirsuta
-
Goffredi SK, Jones WJ, Erhlich H, Springer A, Vrijenhoek RC. Epibiotic bacteria associated with the recently discovered Yeti crab, Kiwa hirsuta. Environ Microbiol 2008, 10:2623-2634.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2623-2634
-
-
Goffredi, S.K.1
Jones, W.J.2
Erhlich, H.3
Springer, A.4
Vrijenhoek, R.C.5
-
29
-
-
0342940789
-
Numerical dominance of a group of marine bacteria in the alpha-subclass of the class Proteobacteria in coastal seawater
-
Gonzalez JM, Moran MA. Numerical dominance of a group of marine bacteria in the alpha-subclass of the class Proteobacteria in coastal seawater. Appl Environ Microbiol 1997, 63:4237-4242.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4237-4242
-
-
Gonzalez, J.M.1
Moran, M.A.2
-
30
-
-
0032774441
-
Lithoheterotrophic growth and electron transfer chain components of the filamentous gliding bacterium Leucothrix mucor DSM 2157 during oxidation of sulfur compounds
-
Grabovich MY, Muntyan MS, Lebedeva VY, Ustiyan VS, Dubinina GA. Lithoheterotrophic growth and electron transfer chain components of the filamentous gliding bacterium Leucothrix mucor DSM 2157 during oxidation of sulfur compounds. FEMS Microbiol Lett 1999, 178:155-161.
-
(1999)
FEMS Microbiol Lett
, vol.178
, pp. 155-161
-
-
Grabovich, M.Y.1
Muntyan, M.S.2
Lebedeva, V.Y.3
Ustiyan, V.S.4
Dubinina, G.A.5
-
31
-
-
0030481512
-
Analytical study of the locomotor and respiratory movements of tubificid worms by means of video recording
-
Guérin C, Giani N. Analytical study of the locomotor and respiratory movements of tubificid worms by means of video recording. Hydrobiologia 1996, 333:63-69.
-
(1996)
Hydrobiologia
, vol.333
, pp. 63-69
-
-
Guérin, C.1
Giani, N.2
-
32
-
-
72649084530
-
Polymerase chain reaction primers miss half of rRNA microbial diversity
-
Hong SH, Bunge J, Leslin C, Jeon S, Epstein SS. Polymerase chain reaction primers miss half of rRNA microbial diversity. ISME J 2009, 3:1365-1373.
-
(2009)
ISME J
, vol.3
, pp. 1365-1373
-
-
Hong, S.H.1
Bunge, J.2
Leslin, C.3
Jeon, S.4
Epstein, S.S.5
-
33
-
-
5444247841
-
Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the ε-Proteobacteria isolated from Okinawa Trough hydrothermal sediments
-
Inagaki F, Takai K, Nealson KH, Horikoshi K. Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the ε-Proteobacteria isolated from Okinawa Trough hydrothermal sediments. Int J Syst Evol Microbiol 2004, 54:1477-1482.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1477-1482
-
-
Inagaki, F.1
Takai, K.2
Nealson, K.H.3
Horikoshi, K.4
-
34
-
-
0000472804
-
Leucothrix mucor infestation of benthic Crustacea, fish eggs, and tropical algae
-
Johnson PW, Sieburth JM, Sastry A, Arnold CR, Doty MS. Leucothrix mucor infestation of benthic Crustacea, fish eggs, and tropical algae. Limnol Oceanogr 1971, 16:962-969.
-
(1971)
Limnol Oceanogr
, vol.16
, pp. 962-969
-
-
Johnson, P.W.1
Sieburth, J.M.2
Sastry, A.3
Arnold, C.R.4
Doty, M.S.5
-
35
-
-
0344629203
-
Bias and artifacts in multitemplate polymerase chain reactions (PCR)
-
Kanagawa T. Bias and artifacts in multitemplate polymerase chain reactions (PCR). J Biosci Bioeng 2003, 96:317-323.
-
(2003)
J Biosci Bioeng
, vol.96
, pp. 317-323
-
-
Kanagawa, T.1
-
36
-
-
0034095798
-
Sulfur cycling of intertidal Wadden Sea sediments (Konigshafen, Island of Sylt, Germany): sulfate reduction and sulfur gas emission
-
Kristensen E, Bodenbenderb J, Jensenc MH, Rennenbergb H, Jensena KM. Sulfur cycling of intertidal Wadden Sea sediments (Konigshafen, Island of Sylt, Germany): sulfate reduction and sulfur gas emission. J Sea Res 2000, 43:93-104.
-
(2000)
J Sea Res
, vol.43
, pp. 93-104
-
-
Kristensen, E.1
Bodenbenderb, J.2
Jensenc, M.H.3
Rennenbergb, H.4
Jensena, K.M.5
-
37
-
-
0036795787
-
Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment
-
Loy A, Lehner A, Lee N, Adamczyk J, Meier H, Ernst J. Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Appl Environ Microbiol 2002, 68:5064-5081.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 5064-5081
-
-
Loy, A.1
Lehner, A.2
Lee, N.3
Adamczyk, J.4
Meier, H.5
Ernst, J.6
et al7
-
38
-
-
33846102841
-
ProbeBase - an online resource for rRNA-targeted oligonucleotide probes: new features 2007
-
Loy A, Maixner F, Wagner M, Horn M. probeBase - an online resource for rRNA-targeted oligonucleotide probes: new features 2007. Nucleic Acids Res 2007, 35:D800-D804.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Loy, A.1
Maixner, F.2
Wagner, M.3
Horn, M.4
-
39
-
-
2542523843
-
ARB: a software environment for sequence data
-
Ludwig W, Strunk O, Westram R, Richter L, Meier H, Yadhukumar. ARB: a software environment for sequence data. Nucleic Acids Res 2004, 32:1363-1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar6
et al7
-
40
-
-
33747369622
-
Dominant microbial populations in limestone-corroding stream biofilms, Frasassi Cave System, Italy
-
Macalady JL, Lyon EH, Koffman B, Albertson LK, Meyer K, Galdenzi S, Mariani S. Dominant microbial populations in limestone-corroding stream biofilms, Frasassi Cave System, Italy. Appl Environ Microbiol 2006, 72:5596-5609.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5596-5609
-
-
Macalady, J.L.1
Lyon, E.H.2
Koffman, B.3
Albertson, L.K.4
Meyer, K.5
Galdenzi, S.6
Mariani, S.7
-
41
-
-
52049102283
-
Are biologists in 'future shock'? Symbiosis integrates biology across domains
-
McFall-Ngai M. Are biologists in 'future shock'? Symbiosis integrates biology across domains. Nat Rev Microbiol 2008, 6:789-792.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 789-792
-
-
McFall-Ngai, M.1
-
42
-
-
62249192807
-
A single regulatory gene is sufficient to alter bacterial host range
-
Mandel MJ, Wollenberg MS, Stabb EV, Visick KL, Ruby EG. A single regulatory gene is sufficient to alter bacterial host range. Nature 2009, 458:215-218.
-
(2009)
Nature
, vol.458
, pp. 215-218
-
-
Mandel, M.J.1
Wollenberg, M.S.2
Stabb, E.V.3
Visick, K.L.4
Ruby, E.G.5
-
43
-
-
0027068041
-
Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: problems and solutions
-
Manz W, Amann R, Ludwig W, Wagner M, Schleifer K-H. Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: problems and solutions. Syst Appl Microbiol 1992, 15:593-600.
-
(1992)
Syst Appl Microbiol
, vol.15
, pp. 593-600
-
-
Manz, W.1
Amann, R.2
Ludwig, W.3
Wagner, M.4
Schleifer, K.-H.5
-
44
-
-
9344247522
-
Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum Cytophaga-Flavobacter-Bacteroides in the natural environment
-
Manz W, Amann R, Ludwig W, Vancanneyt M, Schleifer K-H. Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum Cytophaga-Flavobacter-Bacteroides in the natural environment. Microbiology 1996, 142:1097-1106.
-
(1996)
Microbiology
, vol.142
, pp. 1097-1106
-
-
Manz, W.1
Amann, R.2
Ludwig, W.3
Vancanneyt, M.4
Schleifer, K.-H.5
-
45
-
-
35448969252
-
Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-5'-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes
-
Meyer B, Kuever J. Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-5'-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes. Microbiology 2007, 153:3478-3498.
-
(2007)
Microbiology
, vol.153
, pp. 3478-3498
-
-
Meyer, B.1
Kuever, J.2
-
46
-
-
35448951067
-
Molecular analysis of the distribution and phylogeny of the soxB gene among sulfur-oxidizing bacteria - evolution of the Sox sulfur oxidation enzyme system
-
Meyer B, Imhoff JF, Kuever J. Molecular analysis of the distribution and phylogeny of the soxB gene among sulfur-oxidizing bacteria - evolution of the Sox sulfur oxidation enzyme system. Environ Microbiol 2007, 9:2957-2977.
-
(2007)
Environ Microbiol
, vol.9
, pp. 2957-2977
-
-
Meyer, B.1
Imhoff, J.F.2
Kuever, J.3
-
47
-
-
45149091572
-
Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance
-
Nakagawa S, Takai K. Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance. FEMS Microbiol Ecol 2008, 65:1-14.
-
(2008)
FEMS Microbiol Ecol
, vol.65
, pp. 1-14
-
-
Nakagawa, S.1
Takai, K.2
-
48
-
-
2542427835
-
Symbioses between marine nematodes and sulfur-oxidizing chemoautotrophic bacteria
-
Ott J, Bright M, Bulgheresi S. Symbioses between marine nematodes and sulfur-oxidizing chemoautotrophic bacteria. Symbiosis 2004, 36:103-126.
-
(2004)
Symbiosis
, vol.36
, pp. 103-126
-
-
Ott, J.1
Bright, M.2
Bulgheresi, S.3
-
49
-
-
33947381025
-
Microbial diversity within early-stage cultured Panulirus ornatus phyllosomas
-
Payne MS, Hall MR, Sly L, Bourne DG. Microbial diversity within early-stage cultured Panulirus ornatus phyllosomas. Appl Environ Microbiol 2007, 73:1940-1951.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 1940-1951
-
-
Payne, M.S.1
Hall, M.R.2
Sly, L.3
Bourne, D.G.4
-
50
-
-
52149101801
-
A standard operating procedure for phylogenetic inference (SOPPI) using (rRNA) marker genes
-
Peplies J, Kottmann R, Ludwig W, Glöckner FO. A standard operating procedure for phylogenetic inference (SOPPI) using (rRNA) marker genes. Syst Appl Microbiol 2008, 31:251-257.
-
(2008)
Syst Appl Microbiol
, vol.31
, pp. 251-257
-
-
Peplies, J.1
Kottmann, R.2
Ludwig, W.3
Glöckner, F.O.4
-
51
-
-
77955249226
-
Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous Gamma- and Epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields
-
in press, doi:10.1111/j.1462-2920.2009.02129.x
-
Petersen J, Ramette A, Lott C, Cambon, Bonavita M-A, Zbinden M, Dubilier, N. Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous Gamma- and Epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields. Environ Microbiol 2010, in press, doi:10.1111/j.1462-2920.2009.02129.x
-
(2010)
Environ Microbiol
-
-
Petersen, J.1
Ramette, A.2
Lott, C.3
Cambon4
Bonavita, M.-A.5
Zbinden, M.6
Dubilier, N.7
-
52
-
-
0035853451
-
Phylogeny and distribution of the soxB gene among thiosulfate-oxidizing bacteria
-
Petri R, Podgorsek L, Imhoff JF. Phylogeny and distribution of the soxB gene among thiosulfate-oxidizing bacteria. FEMS Microbiol Lett 2001, 197:171-178.
-
(2001)
FEMS Microbiol Lett
, vol.197
, pp. 171-178
-
-
Petri, R.1
Podgorsek, L.2
Imhoff, J.F.3
-
53
-
-
0000304280
-
Chemoautotrophic, sulfur-oxidizing symbiotic bacteria on marine nematodes: morphological and biochemical characterization
-
Polz MF, Felbeck H, Novak R, Nebelsick M, Ott JA. Chemoautotrophic, sulfur-oxidizing symbiotic bacteria on marine nematodes: morphological and biochemical characterization. Microb Ecol 1992, 24:313-329.
-
(1992)
Microb Ecol
, vol.24
, pp. 313-329
-
-
Polz, M.F.1
Felbeck, H.2
Novak, R.3
Nebelsick, M.4
Ott, J.A.5
-
54
-
-
0031797660
-
Trophic ecology of massive shrimp aggregations at a Mid-Atlantic Ridge hydrothermal vent site
-
Polz MF, Robinson JJ, Cavanaugh CM, Van Dover CL. Trophic ecology of massive shrimp aggregations at a Mid-Atlantic Ridge hydrothermal vent site. Limnol Oceanogr 1998, 43:1631-1638.
-
(1998)
Limnol Oceanogr
, vol.43
, pp. 1631-1638
-
-
Polz, M.F.1
Robinson, J.J.2
Cavanaugh, C.M.3
Van Dover, C.L.4
-
55
-
-
0025153152
-
Metabolic diversity in epibiotic microflora associated with the Pompeii worms Alvinella pompejana and A. caudata (Polychaetae: Annelida) from deep-sea hydrothermal vents
-
Prieur D, Chamroux S, Durand P, Erauso G, Fera P, Jeanthon C. Metabolic diversity in epibiotic microflora associated with the Pompeii worms Alvinella pompejana and A. caudata (Polychaetae: Annelida) from deep-sea hydrothermal vents. Mar Biol 1990, 106:361-367.
-
(1990)
Mar Biol
, vol.106
, pp. 361-367
-
-
Prieur, D.1
Chamroux, S.2
Durand, P.3
Erauso, G.4
Fera, P.5
Jeanthon, C.6
et al7
-
56
-
-
37549027613
-
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J, Glockner FO. SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 2007, 35:7188-7196.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
Fuchs, B.M.4
Ludwig, W.5
Peplies, J.6
Glockner, F.O.7
-
57
-
-
39649116938
-
Seagrass recovery in the Northern Wadden Sea?
-
Reise K, Kohlus J. Seagrass recovery in the Northern Wadden Sea? Helgol Mar Res 2008, 62:77-84.
-
(2008)
Helgol Mar Res
, vol.62
, pp. 77-84
-
-
Reise, K.1
Kohlus, J.2
-
58
-
-
0032891926
-
Trophic ecology of Rimicaris exoculata: a combined lipid abundance/stable isotope approach
-
Rieley G, Dover CLV, Hedrick DB, Eglinton G. Trophic ecology of Rimicaris exoculata: a combined lipid abundance/stable isotope approach. Mar Biol 1999, 133:495-499.
-
(1999)
Mar Biol
, vol.133
, pp. 495-499
-
-
Rieley, G.1
Dover, C.L.V.2
Hedrick, D.B.3
Eglinton, G.4
-
59
-
-
33644959092
-
Candidatus Thiobios zoothamnicoli, an ectosymbiotic bacterium covering the giant marine ciliate Zoothamnium niveum
-
Rinke C, Schmitz-Esser S, Stoecker K, Nussbaumer AD, Molnar DA, Vanura K. Candidatus Thiobios zoothamnicoli, an ectosymbiotic bacterium covering the giant marine ciliate Zoothamnium niveum. Appl Environ Microbiol 2006, 72:2014-2021.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 2014-2021
-
-
Rinke, C.1
Schmitz-Esser, S.2
Stoecker, K.3
Nussbaumer, A.D.4
Molnar, D.A.5
Vanura, K.6
et al7
-
60
-
-
58149116713
-
High genetic similarity between two geographically distinct strains of the sulfur-oxidizing symbiont Candidatus Thiobios zoothamnicoli
-
Rinke C, Schmitz-Esser S, Loy A, Horn M, Wagner M, Bright M. High genetic similarity between two geographically distinct strains of the sulfur-oxidizing symbiont Candidatus Thiobios zoothamnicoli. FEMS Microbiol Ecol 2009, 67:229-241.
-
(2009)
FEMS Microbiol Ecol
, vol.67
, pp. 229-241
-
-
Rinke, C.1
Schmitz-Esser, S.2
Loy, A.3
Horn, M.4
Wagner, M.5
Bright, M.6
-
61
-
-
38549111793
-
Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics
-
Robidart JC, Bench SR, Feldman RA, Novoradovsky A, Podell SB, Gaasterland T. Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics. Environ Microbiol 2008, 10:727-737.
-
(2008)
Environ Microbiol
, vol.10
, pp. 727-737
-
-
Robidart, J.C.1
Bench, S.R.2
Feldman, R.A.3
Novoradovsky, A.4
Podell, S.B.5
Gaasterland, T.6
et al7
-
62
-
-
60449113946
-
Sulfide assimilation by ectosymbionts of the sessile ciliate Zoothamnium niveum
-
Røy H, Vopel K, Huettel M, Jørgensen B. Sulfide assimilation by ectosymbionts of the sessile ciliate Zoothamnium niveum. Mar Biol 2009, 156:669-677.
-
(2009)
Mar Biol
, vol.156
, pp. 669-677
-
-
Røy, H.1
Vopel, K.2
Huettel, M.3
Jørgensen, B.4
-
63
-
-
55849147706
-
Multiple bacterial symbionts in two species of co-occurring gutless oligochaete worms from Mediterranean sea grass sediments
-
Ruehland C, Blazejak A, Lott C, Loy A, Erséus C, Dubilier N. Multiple bacterial symbionts in two species of co-occurring gutless oligochaete worms from Mediterranean sea grass sediments. Environ Microbiol 2008, 10:3404-3416.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3404-3416
-
-
Ruehland, C.1
Blazejak, A.2
Lott, C.3
Loy, A.4
Erséus, C.5
Dubilier, N.6
-
64
-
-
0031463324
-
An efficient DNA extraction method for small metazoans
-
Schizas NV, Street GT, Coull BC, Chandler GT, Quattro JM. An efficient DNA extraction method for small metazoans. Mol Mar Biol Biotechnol 1997, 6:381-383.
-
(1997)
Mol Mar Biol Biotechnol
, vol.6
, pp. 381-383
-
-
Schizas, N.V.1
Street, G.T.2
Coull, B.C.3
Chandler, G.T.4
Quattro, J.M.5
-
65
-
-
0003820695
-
-
Baltimore, MD, USA, University Park Press
-
Sieburth JM. Microbial Seascapes 1975, Baltimore, MD, USA, University Park Press
-
(1975)
Microbial Seascapes
-
-
Sieburth, J.M.1
-
66
-
-
34247098019
-
Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis
-
Sipos R, Szekely AJ, Palatinszky M, Revesz S, Marialigeti K, Nikolausz M. Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis. FEMS Microbiol Ecol 2007, 60:341-350.
-
(2007)
FEMS Microbiol Ecol
, vol.60
, pp. 341-350
-
-
Sipos, R.1
Szekely, A.J.2
Palatinszky, M.3
Revesz, S.4
Marialigeti, K.5
Nikolausz, M.6
-
67
-
-
0000471310
-
Transport, metabolism and detoxification of hydrogen sulfide in animals from sulfide-rich marine environments
-
Somero GN, Childress JJ, Anderson AE. Transport, metabolism and detoxification of hydrogen sulfide in animals from sulfide-rich marine environments. Rev Aquat Sci 1989, 1:591-614.
-
(1989)
Rev Aquat Sci
, vol.1
, pp. 591-614
-
-
Somero, G.N.1
Childress, J.J.2
Anderson, A.E.3
-
68
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML web servers
-
Stamatakis A, Hoover P, Rougemont J. A rapid bootstrap algorithm for the RAxML web servers. Syst Biol 2008, 57:758-771.
-
(2008)
Syst Biol
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
69
-
-
69749099160
-
Molecular investigations of the stalked barnacle Vulcanolepas osheai and the epibiotic bacteria from the Brothers Caldera, Kermadec Arc, New Zealand
-
Suzuki Y, Suzuki M, Tsuchida S, Takai K, Horikoshi K, Southward AJ. Molecular investigations of the stalked barnacle Vulcanolepas osheai and the epibiotic bacteria from the Brothers Caldera, Kermadec Arc, New Zealand. J Mar Biol Assoc UK 2009, 89:727-733.
-
(2009)
J Mar Biol Assoc UK
, vol.89
, pp. 727-733
-
-
Suzuki, Y.1
Suzuki, M.2
Tsuchida, S.3
Takai, K.4
Horikoshi, K.5
Southward, A.J.6
et al7
-
70
-
-
32044458392
-
Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria
-
Takai K, Campbell BJ, Cary SC, Suzuki M, Oida H, Nunoura T. Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria. Appl Environ Microbiol 2005, 71:7310-7320.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7310-7320
-
-
Takai, K.1
Campbell, B.J.2
Cary, S.C.3
Suzuki, M.4
Oida, H.5
Nunoura, T.6
et al7
-
71
-
-
84856383856
-
Tubificoides benedii (Udekem, 1855): Accessed through the World Register of Marine Species
-
WWW document]. URL (accessed on 13 August 2009
-
Timm T, Erséus C. Tubificoides benedii (Udekem, 1855): Accessed through the World Register of Marine Species. 2009, http://www.marinespecies.org/aphia.php?p=taxdetails&id=137571, WWW document]. URL (accessed on 13 August 2009
-
(2009)
-
-
Timm, T.1
Erséus, C.2
-
72
-
-
0027339723
-
Optimizing fluorescent in situ-hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms
-
Wallner G, Amann R, Beisker W. Optimizing fluorescent in situ-hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms. Cytometry 1993, 14:136-143.
-
(1993)
Cytometry
, vol.14
, pp. 136-143
-
-
Wallner, G.1
Amann, R.2
Beisker, W.3
-
73
-
-
77955297223
-
Compositional and functional transition in epibiotic symbionts of Shinkaia crosnieri: morphology, structure, energy and carbon metabolisms during rearing: Goldschmidt Conference 2009 - Challenges to Our Volatile Planet
-
Poster presentation. Davos, Switzerland
-
Watsuji T, Takai K. Compositional and functional transition in epibiotic symbionts of Shinkaia crosnieri: morphology, structure, energy and carbon metabolisms during rearing: Goldschmidt Conference 2009 - Challenges to Our Volatile Planet. 2009, Poster presentation. Davos, Switzerland
-
(2009)
-
-
Watsuji, T.1
Takai, K.2
-
74
-
-
33750431080
-
Symbiosis insights through metagenomic analysis of a microbial consortium
-
Woyke T, Teeling H, Ivanova NN, Huntemann M, Richter M, Gloeckner FO. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 2006, 443:950-955.
-
(2006)
Nature
, vol.443
, pp. 950-955
-
-
Woyke, T.1
Teeling, H.2
Ivanova, N.N.3
Huntemann, M.4
Richter, M.5
Gloeckner, F.O.6
et al7
-
75
-
-
0142028043
-
Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea alvinocarid shrimp Rimicaris exoculata gut
-
Zbinden M, Cambon-Bonavita MA. Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea alvinocarid shrimp Rimicaris exoculata gut. FEMS Microbiol Ecol 2003, 46:23-30.
-
(2003)
FEMS Microbiol Ecol
, vol.46
, pp. 23-30
-
-
Zbinden, M.1
Cambon-Bonavita, M.A.2
|