The importance of platform annotation in interpreting microarray data

The Lancet Oncology

Volumn 11, Issue 8, 2010, Pages 717-

  Dunning, Mark J ^b   Curtis, Christina ^a   Barbosa Morais, Nuno L ^a   Caldas, Carlos ^a   Tavaré, Simon ^a   Lynch, Andrew G ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b CANCER RESEARCH UK CAMBRIDGE RESEARCH INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EPIDERMAL GROWTH FACTOR RECEPTOR 2; GROWTH FACTOR RECEPTOR BOUND PROTEIN 7;

BREAST CANCER; GENE ACTIVITY; GENE MAPPING; HUMAN; HUMAN GENOME; LETTER; MICROARRAY ANALYSIS; MOLECULAR PROBE; PREDICTION; PRIORITY JOURNAL; PROTEIN EXPRESSION; SIGNAL NOISE RATIO; SINGLE NUCLEOTIDE POLYMORPHISM;

BREAST NEOPLASMS; DNA, NEOPLASM; FEMALE; GENE EXPRESSION PROFILING; HUMANS; MOLECULAR PROBES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; TERMINOLOGY AS TOPIC;

EID: 77955262935     PISSN: 14702045     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1470-2045(10)70115-7     Document Type: Letter

References (5)

1. Weigelt B, Mackay A, A'hern R, et al. Breast cancer molecular profiling with single sample predictors: a retrospective analysis. Lancet Oncol 2010, 11:339-349.
2. Lusa L, McShane LM, Reid JF, et al. Challenges in projecting clustering results across gene expression-profiling datasets. J Natl Cancer Inst 2007, 99:1715-1723.
3. Parker JS, Mullins M, Cheang MC, et al. Supervised risk predictor of breast cancer based on intrinsic subtypes. J Clin Oncol 2009, 27:1160-1167.
4. Natrajan R, Weigelt B, Mackay A, et al. An integrative genomic and transcriptomic analysis reveals molecular pathways and networks regulated by copy number aberrations in basal-like, HER2 and luminal cancers. Breast Cancer Res Treat 2009, 121:575-589.
5. Barbosa-Morais NL, Dunning MJ, Samarajiwa SA, et al. A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data. Nucleic Acids Res 2009, published online Nov 18. 10.1093/nar/gkp942.