-
1
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
10.1038/35048692, 11130711
-
Initiative AG. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815. 10.1038/35048692, 11130711.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
Initiative, A.G.1
-
2
-
-
0034119994
-
National Science Foundation-Sponsored Workshop Report: "The 2010 Project" functional genomics and the virtual plant. A blueprint for understanding how plants are built and how to improve them
-
10.1104/pp.123.2.423, 1539254, 10859172
-
Chory J, Ecker JR, Briggs S, Caboche M, Coruzzi GM, Cook D, Dangl J, Grant S, Guerinot ML, Henikoff S, et al. National Science Foundation-Sponsored Workshop Report: "The 2010 Project" functional genomics and the virtual plant. A blueprint for understanding how plants are built and how to improve them. Plant Physiol 2000, 123:423-426. 10.1104/pp.123.2.423, 1539254, 10859172.
-
(2000)
Plant Physiol
, vol.123
, pp. 423-426
-
-
Chory, J.1
Ecker, J.R.2
Briggs, S.3
Caboche, M.4
Coruzzi, G.M.5
Cook, D.6
Dangl, J.7
Grant, S.8
Guerinot, M.L.9
Henikoff, S.10
-
3
-
-
0034353112
-
Arabidopsis microarray service facilities
-
10.1104/pp.124.4.1468, 1539298, 11115861
-
Wisman E, Ohlrogge J. Arabidopsis microarray service facilities. Plant Physiol 2000, 124:1468-1471. 10.1104/pp.124.4.1468, 1539298, 11115861.
-
(2000)
Plant Physiol
, vol.124
, pp. 1468-1471
-
-
Wisman, E.1
Ohlrogge, J.2
-
4
-
-
0034524684
-
Large-scale profiling of the Arabidopsis transcriptome
-
10.1104/pp.124.4.1472, 1539299, 11115862
-
Zhu T, Wang X. Large-scale profiling of the Arabidopsis transcriptome. Plant Physiol 2000, 124:1472-1476. 10.1104/pp.124.4.1472, 1539299, 11115862.
-
(2000)
Plant Physiol
, vol.124
, pp. 1472-1476
-
-
Zhu, T.1
Wang, X.2
-
5
-
-
2342501846
-
Development and evaluation of an Arabidopsis whole genome Affymetrix probe array
-
10.1111/j.1365-313X.2004.02061.x, 15086809
-
Redman JC, Haas BJ, Tanimoto G, Town CD. Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. Plant J 2004, 38:545-561. 10.1111/j.1365-313X.2004.02061.x, 15086809.
-
(2004)
Plant J
, vol.38
, pp. 545-561
-
-
Redman, J.C.1
Haas, B.J.2
Tanimoto, G.3
Town, C.D.4
-
6
-
-
0037350568
-
Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray
-
10.1101/gr.552003, 430289, 12618363
-
Kim H, Snesrud EC, Haas B, Cheung F, Town CD, Quackenbush J. Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray. Genome Res 2003, 13:327-340. 10.1101/gr.552003, 430289, 12618363.
-
(2003)
Genome Res
, vol.13
, pp. 327-340
-
-
Kim, H.1
Snesrud, E.C.2
Haas, B.3
Cheung, F.4
Town, C.D.5
Quackenbush, J.6
-
7
-
-
0242300620
-
Empirical analysis of transcriptional activity in the Arabidopsis genome
-
10.1126/science.1088305, 14593172
-
Yamada K, Lim J, Dale JM, Chen H, Shinn P, Palm CJ, Southwick AM, Wu HC, Kim C, Nguyen M, et al. Empirical analysis of transcriptional activity in the Arabidopsis genome. Science 2003, 302:842-846. 10.1126/science.1088305, 14593172.
-
(2003)
Science
, vol.302
, pp. 842-846
-
-
Yamada, K.1
Lim, J.2
Dale, J.M.3
Chen, H.4
Shinn, P.5
Palm, C.J.6
Southwick, A.M.7
Wu, H.C.8
Kim, C.9
Nguyen, M.10
-
8
-
-
20144386497
-
Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays
-
10.1073/pnas.0408203102, 555476, 15755812
-
Stolc V, Samanta MP, Tongprasit W, Sethi H, Liang S, Nelson DC, Hegeman A, Nelson C, Rancour D, Bednarek S, et al. Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays. Proc Natl Acad Sci USA 2005, 102:4453-4458. 10.1073/pnas.0408203102, 555476, 15755812.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 4453-4458
-
-
Stolc, V.1
Samanta, M.P.2
Tongprasit, W.3
Sethi, H.4
Liang, S.5
Nelson, D.C.6
Hegeman, A.7
Nelson, C.8
Rancour, D.9
Bednarek, S.10
-
9
-
-
48249130774
-
At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana
-
10.1186/gb-2008-9-7-r112, 2530869, 18613972
-
Laubinger S, Zeller G, Henz SR, Sachsenberg T, Widmer CK, Naouar N, Vuylsteke M, Scholkopf B, Ratsch G, Weigel D. At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana. Genome Biol 2008, 9:R112. 10.1186/gb-2008-9-7-r112, 2530869, 18613972.
-
(2008)
Genome Biol
, vol.9
-
-
Laubinger, S.1
Zeller, G.2
Henz, S.R.3
Sachsenberg, T.4
Widmer, C.K.5
Naouar, N.6
Vuylsteke, M.7
Scholkopf, B.8
Ratsch, G.9
Weigel, D.10
-
10
-
-
2642570305
-
The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote
-
10.1101/gad.1198204, 420352, 15175259
-
Schubeler D, MacAlpine DM, Scalzo D, Wirbelauer C, Kooperberg C, van Leeuwen F, Gottschling DE, O'Neill LP, Turner BM, Delrow J, et al. The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote. Genes Dev 2004, 18:1263-1271. 10.1101/gad.1198204, 420352, 15175259.
-
(2004)
Genes Dev
, vol.18
, pp. 1263-1271
-
-
Schubeler, D.1
MacAlpine, D.M.2
Scalzo, D.3
Wirbelauer, C.4
Kooperberg, C.5
van Leeuwen, F.6
Gottschling, D.E.7
O'Neill, L.P.8
Turner, B.M.9
Delrow, J.10
-
11
-
-
23744483843
-
Profiling histone modification patterns in plants using genomic tiling microarrays
-
10.1038/nmeth0305-213, 16163802
-
Gendrel AV, Lippman Z, Martienssen R, Colot V. Profiling histone modification patterns in plants using genomic tiling microarrays. Nat Methods 2005, 2:213-218. 10.1038/nmeth0305-213, 16163802.
-
(2005)
Nat Methods
, vol.2
, pp. 213-218
-
-
Gendrel, A.V.1
Lippman, Z.2
Martienssen, R.3
Colot, V.4
-
12
-
-
2942518343
-
Mapping global histone acetylation patterns to gene expression
-
10.1016/j.cell.2004.05.023, 15186774
-
Kurdistani SK, Tavazoie S, Grunstein M. Mapping global histone acetylation patterns to gene expression. Cell 2004, 117:721-733. 10.1016/j.cell.2004.05.023, 15186774.
-
(2004)
Cell
, vol.117
, pp. 721-733
-
-
Kurdistani, S.K.1
Tavazoie, S.2
Grunstein, M.3
-
13
-
-
12844280515
-
Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation
-
Chang S, Pikaard CS. Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation. J Biol Chem 2005, 280:796-804.
-
(2005)
J Biol Chem
, vol.280
, pp. 796-804
-
-
Chang, S.1
Pikaard, C.S.2
-
14
-
-
0034704248
-
Genome-wide location and function of DNA binding proteins
-
10.1126/science.290.5500.2306, 11125145
-
Ren B, Robert F, Wyrick JJ, Aparicio O, Jennings EG, Simon I, Zeitlinger J, Schreiber J, Hannett N, Kanin E, et al. Genome-wide location and function of DNA binding proteins. Science 2000, 290:2306-2309. 10.1126/science.290.5500.2306, 11125145.
-
(2000)
Science
, vol.290
, pp. 2306-2309
-
-
Ren, B.1
Robert, F.2
Wyrick, J.J.3
Aparicio, O.4
Jennings, E.G.5
Simon, I.6
Zeitlinger, J.7
Schreiber, J.8
Hannett, N.9
Kanin, E.10
-
15
-
-
33745068992
-
Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants
-
10.1111/j.1365-313X.2006.02770.x, 16824183
-
Thibaud-Nissen F, Wu H, Richmond T, Redman JC, Johnson C, Green R, Arias J, Town CD. Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants. Plant J 2006, 47:152-162. 10.1111/j.1365-313X.2006.02770.x, 16824183.
-
(2006)
Plant J
, vol.47
, pp. 152-162
-
-
Thibaud-Nissen, F.1
Wu, H.2
Richmond, T.3
Redman, J.C.4
Johnson, C.5
Green, R.6
Arias, J.7
Town, C.D.8
-
16
-
-
0033891352
-
Gene traps: tools for plant development and genomics
-
10.1105/tpc.12.7.1007, 149045, 10899970
-
Springer PS. Gene traps: tools for plant development and genomics. Plant Cell 2000, 12:1007-1020. 10.1105/tpc.12.7.1007, 149045, 10899970.
-
(2000)
Plant Cell
, vol.12
, pp. 1007-1020
-
-
Springer, P.S.1
-
17
-
-
0028012477
-
Arabidopsis mutants define downstream branches in the phototransduction pathway
-
10.1101/gad.8.3.339, 8314087
-
Li HM, Altschmied L, Chory J. Arabidopsis mutants define downstream branches in the phototransduction pathway. Genes Dev 1994, 8:339-349. 10.1101/gad.8.3.339, 8314087.
-
(1994)
Genes Dev
, vol.8
, pp. 339-349
-
-
Li, H.M.1
Altschmied, L.2
Chory, J.3
-
18
-
-
6544244002
-
The promoter of the plant defensin gene PDF1.2 from Arabidopsis is systemically activated by fungal pathogens and responds to methyl jasmonate but not to salicylic acid
-
10.1023/A:1006070413843, 9869413
-
Manners JM, Penninckx IA, Vermaere K, Kazan K, Brown RL, Morgan A, Maclean DJ, Curtis MD, Cammue BP, Broekaert WF. The promoter of the plant defensin gene PDF1.2 from Arabidopsis is systemically activated by fungal pathogens and responds to methyl jasmonate but not to salicylic acid. Plant Mol Biol 1998, 38:1071-1080. 10.1023/A:1006070413843, 9869413.
-
(1998)
Plant Mol Biol
, vol.38
, pp. 1071-1080
-
-
Manners, J.M.1
Penninckx, I.A.2
Vermaere, K.3
Kazan, K.4
Brown, R.L.5
Morgan, A.6
Maclean, D.J.7
Curtis, M.D.8
Cammue, B.P.9
Broekaert, W.F.10
-
19
-
-
0035166696
-
The promoter of a basic PR1-like gene, AtPRB1, from Arabidopsis establishes an organ-specific expression pattern and responsiveness to ethylene and methyl jasmonate
-
10.1023/A:1012410009930, 11725949
-
Santamaria M, Thomson CJ, Read ND, Loake GJ. The promoter of a basic PR1-like gene, AtPRB1, from Arabidopsis establishes an organ-specific expression pattern and responsiveness to ethylene and methyl jasmonate. Plant Mol Biol 2001, 47:641-652. 10.1023/A:1012410009930, 11725949.
-
(2001)
Plant Mol Biol
, vol.47
, pp. 641-652
-
-
Santamaria, M.1
Thomson, C.J.2
Read, N.D.3
Loake, G.J.4
-
20
-
-
8444233334
-
Potassium carrier TRH1 is required for auxin transport in Arabidopsis roots
-
10.1111/j.1365-313X.2004.02230.x, 15500468
-
Vicente-Agullo F, Rigas S, Desbrosses G, Dolan L, Hatzopoulos P, Grabov A. Potassium carrier TRH1 is required for auxin transport in Arabidopsis roots. Plant J 2004, 40:523-535. 10.1111/j.1365-313X.2004.02230.x, 15500468.
-
(2004)
Plant J
, vol.40
, pp. 523-535
-
-
Vicente-Agullo, F.1
Rigas, S.2
Desbrosses, G.3
Dolan, L.4
Hatzopoulos, P.5
Grabov, A.6
-
21
-
-
34347219445
-
A secretory pathway-localized cation diffusion facilitator confers plant manganese tolerance
-
10.1073/pnas.0609507104, 1895984, 17494768
-
Peiter E, Montanini B, Gobert A, Pedas P, Husted S, Maathuis FJ, Blaudez D, Chalot M, Sanders D. A secretory pathway-localized cation diffusion facilitator confers plant manganese tolerance. Proc Natl Acad Sci USA 2007, 104:8532-8537. 10.1073/pnas.0609507104, 1895984, 17494768.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 8532-8537
-
-
Peiter, E.1
Montanini, B.2
Gobert, A.3
Pedas, P.4
Husted, S.5
Maathuis, F.J.6
Blaudez, D.7
Chalot, M.8
Sanders, D.9
-
22
-
-
57749110503
-
Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells
-
10.1104/pp.108.121939, 2577265, 18768911
-
Bernal AJ, Yoo CM, Mutwil M, Jensen JK, Hou G, Blaukopf C, Sorensen I, Blancaflor EB, Scheller HV, Willats WG. Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells. Plant Physiol 2008, 148:1238-1253. 10.1104/pp.108.121939, 2577265, 18768911.
-
(2008)
Plant Physiol
, vol.148
, pp. 1238-1253
-
-
Bernal, A.J.1
Yoo, C.M.2
Mutwil, M.3
Jensen, J.K.4
Hou, G.5
Blaukopf, C.6
Sorensen, I.7
Blancaflor, E.B.8
Scheller, H.V.9
Willats, W.G.10
-
23
-
-
0037781051
-
Regulatory elements of the floral homeotic gene AGAMOUS identified by phylogenetic footprinting and shadowing
-
10.1105/tpc.009548, 156367, 12782724
-
Hong RL, Hamaguchi L, Busch MA, Weigel D. Regulatory elements of the floral homeotic gene AGAMOUS identified by phylogenetic footprinting and shadowing. Plant Cell 2003, 15:1296-1309. 10.1105/tpc.009548, 156367, 12782724.
-
(2003)
Plant Cell
, vol.15
, pp. 1296-1309
-
-
Hong, R.L.1
Hamaguchi, L.2
Busch, M.A.3
Weigel, D.4
-
24
-
-
0027130892
-
Arabidopsis GLABROUS1 Gene Requires Downstream Sequences for Function
-
10.1105/tpc.5.12.1739, 160400, 12271054
-
Larkin JC, Oppenheimer DG, Pollock S, Marks MD. Arabidopsis GLABROUS1 Gene Requires Downstream Sequences for Function. Plant Cell 1993, 5:1739-1748. 10.1105/tpc.5.12.1739, 160400, 12271054.
-
(1993)
Plant Cell
, vol.5
, pp. 1739-1748
-
-
Larkin, J.C.1
Oppenheimer, D.G.2
Pollock, S.3
Marks, M.D.4
-
25
-
-
0036682518
-
Differential chromatin structure within a tandem array 100 kb upstream of the maize b1 locus is associated with paramutation
-
10.1101/gad.1006702, 186425, 12154122
-
Stam M, Belele C, Dorweiler JE, Chandler VL. Differential chromatin structure within a tandem array 100 kb upstream of the maize b1 locus is associated with paramutation. Genes Dev 2002, 16:1906-1918. 10.1101/gad.1006702, 186425, 12154122.
-
(2002)
Genes Dev
, vol.16
, pp. 1906-1918
-
-
Stam, M.1
Belele, C.2
Dorweiler, J.E.3
Chandler, V.L.4
-
26
-
-
33846942242
-
Experimental validation of novel genes predicted in the un-annotated regions of the Arabidopsis genome
-
10.1186/1471-2164-8-18, 1783852, 17229318
-
Moskal WA, Wu HC, Underwood BA, Wang W, Town CD, Xiao Y. Experimental validation of novel genes predicted in the un-annotated regions of the Arabidopsis genome. BMC Genomics 2007, 8:18. 10.1186/1471-2164-8-18, 1783852, 17229318.
-
(2007)
BMC Genomics
, vol.8
, pp. 18
-
-
Moskal, W.A.1
Wu, H.C.2
Underwood, B.A.3
Wang, W.4
Town, C.D.5
Xiao, Y.6
-
27
-
-
33846945914
-
EuGene: an eukaryotic gene finder that combines several sources of evidence
-
Schiex TMA, Rouzé P. EuGene: an eukaryotic gene finder that combines several sources of evidence. Lect Notes in Comput Sci 2006, 11-125.
-
(2006)
Lect Notes in Comput Sci
, pp. 11-125
-
-
Schiex, T.M.A.1
Rouzé, P.2
-
28
-
-
17444437765
-
Integrating genomic homology into gene structure prediction
-
Korf I, Flicek P, Duan D, Brent MR. Integrating genomic homology into gene structure prediction. Bioinformatics 2001, 17(Suppl 1):S140-148.
-
(2001)
Bioinformatics
, vol.17
, Issue.SUPPL. 1
-
-
Korf, I.1
Flicek, P.2
Duan, D.3
Brent, M.R.4
-
29
-
-
33644840915
-
Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants
-
10.1104/pp.105.063479, 1283769, 16244158
-
Xiao YL, Smith SR, Ishmael N, Redman JC, Kumar N, Monaghan EL, Ayele M, Haas BJ, Wu HC, Town CD. Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants. Plant Physiol 2005, 139:1323-1337. 10.1104/pp.105.063479, 1283769, 16244158.
-
(2005)
Plant Physiol
, vol.139
, pp. 1323-1337
-
-
Xiao, Y.L.1
Smith, S.R.2
Ishmael, N.3
Redman, J.C.4
Kumar, N.5
Monaghan, E.L.6
Ayele, M.7
Haas, B.J.8
Wu, H.C.9
Town, C.D.10
-
30
-
-
33644876658
-
Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA
-
10.1093/nar/gkj077, 1347440, 16381968
-
Nakano M, Nobuta K, Vemaraju K, Tej SS, Skogen JW, Meyers BC. Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA. Nucleic Acids Res 2006, 34:D731-735. 10.1093/nar/gkj077, 1347440, 16381968.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Nakano, M.1
Nobuta, K.2
Vemaraju, K.3
Tej, S.S.4
Skogen, J.W.5
Meyers, B.C.6
-
31
-
-
33645525430
-
Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations
-
10.1111/j.1467-7652.2006.00183.x, 17147637
-
Underwood BA, Vanderhaeghen R, Whitford R, Town CD, Hilson P. Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations. Plant Biotechnol J 2006, 4:317-324. 10.1111/j.1467-7652.2006.00183.x, 17147637.
-
(2006)
Plant Biotechnol J
, vol.4
, pp. 317-324
-
-
Underwood, B.A.1
Vanderhaeghen, R.2
Whitford, R.3
Town, C.D.4
Hilson, P.5
-
32
-
-
0033676098
-
DNA cloning using in vitro site-specific recombination
-
10.1101/gr.143000, 310948, 11076863
-
Hartley JL, Temple GF, Brasch MA. DNA cloning using in vitro site-specific recombination. Genome Res 2000, 10:1788-1795. 10.1101/gr.143000, 310948, 11076863.
-
(2000)
Genome Res
, vol.10
, pp. 1788-1795
-
-
Hartley, J.L.1
Temple, G.F.2
Brasch, M.A.3
-
33
-
-
0344913554
-
Intergeneric transfer and exchange recombination of restriction fragments cloned in pBR322: a novel strategy for the reversed genetics of the Ti plasmids of Agrobacterium tumefaciens
-
555148, 11894957
-
Van Haute E, Joos H, Maes M, Warren G, Van Montagu M, Schell J. Intergeneric transfer and exchange recombination of restriction fragments cloned in pBR322: a novel strategy for the reversed genetics of the Ti plasmids of Agrobacterium tumefaciens. Embo J 1983, 2:411-417. 555148, 11894957.
-
(1983)
Embo J
, vol.2
, pp. 411-417
-
-
Van Haute, E.1
Joos, H.2
Maes, M.3
Warren, G.4
Van Montagu, M.5
Schell, J.6
-
34
-
-
0036909848
-
Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2 of Arabidopsis
-
10.1104/pp.010207, 12481096
-
Xiao YL, Malik M, Whitelaw CA, Town CD. Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2 of Arabidopsis. Plant Physiol 2002, 130:2118-2128. 10.1104/pp.010207, 12481096.
-
(2002)
Plant Physiol
, vol.130
, pp. 2118-2128
-
-
Xiao, Y.L.1
Malik, M.2
Whitelaw, C.A.3
Town, C.D.4
-
35
-
-
0032447801
-
Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
-
10.1046/j.1365-313x.1998.00343.x, 10069079
-
Clough SJ, Bent AF. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 1998, 16:735-743. 10.1046/j.1365-313x.1998.00343.x, 10069079.
-
(1998)
Plant J
, vol.16
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
36
-
-
33644751190
-
Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages
-
10.1002/cfg.496, 2447502, 18629207
-
Jaiswal P, Avraham S, Ilic K, Kellogg EA, McCouch S, Pujar A, Reiser L, Rhee SY, Sachs MM, Schaeffer M, et al. Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages. Comp Funct Genomics 2005, 6:388-397. 10.1002/cfg.496, 2447502, 18629207.
-
(2005)
Comp Funct Genomics
, vol.6
, pp. 388-397
-
-
Jaiswal, P.1
Avraham, S.2
Ilic, K.3
Kellogg, E.A.4
McCouch, S.5
Pujar, A.6
Reiser, L.7
Rhee, S.Y.8
Sachs, M.M.9
Schaeffer, M.10
-
37
-
-
0027570115
-
Alkali treatment for rapid preparation of plant material for reliable PCR analysis
-
10.1046/j.1365-313X.1993.t01-26-00999.x, 8220456
-
Klimyuk VI, Carroll BJ, Thomas CM, Jones JD. Alkali treatment for rapid preparation of plant material for reliable PCR analysis. Plant J 1993, 3:493-494. 10.1046/j.1365-313X.1993.t01-26-00999.x, 8220456.
-
(1993)
Plant J
, vol.3
, pp. 493-494
-
-
Klimyuk, V.I.1
Carroll, B.J.2
Thomas, C.M.3
Jones, J.D.4
-
38
-
-
0034538379
-
Technical advance: an aniline blue staining procedure for confocal microscopy and 3 D imaging of normal and perturbed cellular phenotypes in mature Arabidopsis embryos
-
10.1046/j.1365-313x.2000.00892.x, 11115135
-
Bougourd S, Marrison J, Haseloff J. Technical advance: an aniline blue staining procedure for confocal microscopy and 3 D imaging of normal and perturbed cellular phenotypes in mature Arabidopsis embryos. Plant J 2000, 24:543-550. 10.1046/j.1365-313x.2000.00892.x, 11115135.
-
(2000)
Plant J
, vol.24
, pp. 543-550
-
-
Bougourd, S.1
Marrison, J.2
Haseloff, J.3
-
39
-
-
0033120395
-
Sequences surrounding the transcription initiation site of the Arabidopsis enoyl-acyl carrier protein reductase gene control seed expression in transgenic tobacco
-
10.1023/A:1006129924683, 10380806
-
de Boer GJ, Testerink C, Pielage G, Nijkamp HJ, Stuitje AR. Sequences surrounding the transcription initiation site of the Arabidopsis enoyl-acyl carrier protein reductase gene control seed expression in transgenic tobacco. Plant Mol Biol 1999, 39:1197-1207. 10.1023/A:1006129924683, 10380806.
-
(1999)
Plant Mol Biol
, vol.39
, pp. 1197-1207
-
-
de Boer, G.J.1
Testerink, C.2
Pielage, G.3
Nijkamp, H.J.4
Stuitje, A.R.5
-
40
-
-
0035000589
-
Small changes in the regulation of one Arabidopsis profilin isovariant, PRF1, alter seedling development
-
10.1105/tpc.13.5.1179, 135555, 11340190
-
McKinney EC, Kandasamy MK, Meagher RB. Small changes in the regulation of one Arabidopsis profilin isovariant, PRF1, alter seedling development. Plant Cell 2001, 13:1179-1191. 10.1105/tpc.13.5.1179, 135555, 11340190.
-
(2001)
Plant Cell
, vol.13
, pp. 1179-1191
-
-
McKinney, E.C.1
Kandasamy, M.K.2
Meagher, R.B.3
-
41
-
-
14844320081
-
Arabidopsis AtSPL14, a plant-specific SBP-domain transcription factor, participates in plant development and sensitivity to fumonisin B1
-
10.1111/j.1365-313X.2005.02334.x, 15703061
-
Stone JM, Liang X, Nekl ER, Stiers JJ. Arabidopsis AtSPL14, a plant-specific SBP-domain transcription factor, participates in plant development and sensitivity to fumonisin B1. Plant J 2005, 41:744-754. 10.1111/j.1365-313X.2005.02334.x, 15703061.
-
(2005)
Plant J
, vol.41
, pp. 744-754
-
-
Stone, J.M.1
Liang, X.2
Nekl, E.R.3
Stiers, J.J.4
-
42
-
-
29544438551
-
Differential expression of the Arabidopsis cytochrome c genes Cytc-1 and Cytc-2. Evidence for the involvement of TCP-domain protein-binding elements in anther- and meristem-specific expression of the Cytc-1 gene
-
10.1104/pp.105.065920, 1203360, 16113211
-
Welchen E, Gonzalez DH. Differential expression of the Arabidopsis cytochrome c genes Cytc-1 and Cytc-2. Evidence for the involvement of TCP-domain protein-binding elements in anther- and meristem-specific expression of the Cytc-1 gene. Plant Physiol 2005, 139:88-100. 10.1104/pp.105.065920, 1203360, 16113211.
-
(2005)
Plant Physiol
, vol.139
, pp. 88-100
-
-
Welchen, E.1
Gonzalez, D.H.2
-
43
-
-
58149232499
-
Mutations in AtCML9, a calmodulin-like protein from Arabidopsis thaliana, alter plant responses to abiotic stress and abscisic acid
-
10.1111/j.1365-313X.2008.03622.x, 18643966
-
Magnan F, Ranty B, Charpenteau M, Sotta B, Galaud JP, Aldon D. Mutations in AtCML9, a calmodulin-like protein from Arabidopsis thaliana, alter plant responses to abiotic stress and abscisic acid. Plant J 2008, 56:575-589. 10.1111/j.1365-313X.2008.03622.x, 18643966.
-
(2008)
Plant J
, vol.56
, pp. 575-589
-
-
Magnan, F.1
Ranty, B.2
Charpenteau, M.3
Sotta, B.4
Galaud, J.P.5
Aldon, D.6
-
44
-
-
40749137402
-
ECA3, a Golgi-localized P2A-type ATPase, plays a crucial role in manganese nutrition in Arabidopsis
-
10.1104/pp.107.110817, 2230566, 18024560
-
Mills RF, Doherty ML, Lopez-Marques RL, Weimar T, Dupree P, Palmgren MG, Pittman JK, Williams LE. ECA3, a Golgi-localized P2A-type ATPase, plays a crucial role in manganese nutrition in Arabidopsis. Plant Physiol 2008, 146:116-128. 10.1104/pp.107.110817, 2230566, 18024560.
-
(2008)
Plant Physiol
, vol.146
, pp. 116-128
-
-
Mills, R.F.1
Doherty, M.L.2
Lopez-Marques, R.L.3
Weimar, T.4
Dupree, P.5
Palmgren, M.G.6
Pittman, J.K.7
Williams, L.E.8
-
45
-
-
33750094693
-
Three methods for the introduction of foreign DNA into Agrobacterium
-
Wise AA, Liu Z, Binns AN. Three methods for the introduction of foreign DNA into Agrobacterium. Methods Mol Biol 2006, 343:43-53.
-
(2006)
Methods Mol Biol
, vol.343
, pp. 43-53
-
-
Wise, A.A.1
Liu, Z.2
Binns, A.N.3
-
46
-
-
63049126127
-
Protocol: Streamlined sub-protocols for floral-dip transformation and selection of transformants in Arabidopsis thaliana
-
10.1186/1746-4811-5-3, 2660325, 19250520
-
Davis AM, Hall A, Millar AJ, Darrah C, Davis SJ. Protocol: Streamlined sub-protocols for floral-dip transformation and selection of transformants in Arabidopsis thaliana. Plant Methods 2009, 5:3. 10.1186/1746-4811-5-3, 2660325, 19250520.
-
(2009)
Plant Methods
, vol.5
, pp. 3
-
-
Davis, A.M.1
Hall, A.2
Millar, A.J.3
Darrah, C.4
Davis, S.J.5
-
47
-
-
0033941146
-
Female reproductive tissues are the primary target of Agrobacterium-mediated transformation by the Arabidopsis floral-dip method
-
10.1104/pp.123.3.895, 59052, 10889238
-
Desfeux C, Clough SJ, Bent AF. Female reproductive tissues are the primary target of Agrobacterium-mediated transformation by the Arabidopsis floral-dip method. Plant Physiol 2000, 123:895-904. 10.1104/pp.123.3.895, 59052, 10889238.
-
(2000)
Plant Physiol
, vol.123
, pp. 895-904
-
-
Desfeux, C.1
Clough, S.J.2
Bent, A.F.3
-
48
-
-
0344583765
-
Targeted integration of T-DNA into the tobacco genome at double-stranded breaks: new insights on the mechanism of T-DNA integration
-
10.1104/pp.103.026104, 281593, 14551336
-
Chilton MD, Que Q. Targeted integration of T-DNA into the tobacco genome at double-stranded breaks: new insights on the mechanism of T-DNA integration. Plant Physiol 2003, 133:956-965. 10.1104/pp.103.026104, 281593, 14551336.
-
(2003)
Plant Physiol
, vol.133
, pp. 956-965
-
-
Chilton, M.D.1
Que, Q.2
-
49
-
-
13844272946
-
Identification of Arabidopsis thaliana transformants without selection reveals a high occurrence of silenced T-DNA integrations
-
10.1111/j.1365-313X.2004.02312.x, 15659104
-
Francis KE, Spiker S. Identification of Arabidopsis thaliana transformants without selection reveals a high occurrence of silenced T-DNA integrations. Plant J 2005, 41:464-477. 10.1111/j.1365-313X.2004.02312.x, 15659104.
-
(2005)
Plant J
, vol.41
, pp. 464-477
-
-
Francis, K.E.1
Spiker, S.2
-
50
-
-
36749007180
-
Boron-toxicity tolerance in barley arising from efflux transporter amplification
-
10.1126/science.1146853, 18048688
-
Sutton T, Baumann U, Hayes J, Collins NC, Shi BJ, Schnurbusch T, Hay A, Mayo G, Pallotta M, Tester M, Langridge P. Boron-toxicity tolerance in barley arising from efflux transporter amplification. Science 2007, 318:1446-1449. 10.1126/science.1146853, 18048688.
-
(2007)
Science
, vol.318
, pp. 1446-1449
-
-
Sutton, T.1
Baumann, U.2
Hayes, J.3
Collins, N.C.4
Shi, B.J.5
Schnurbusch, T.6
Hay, A.7
Mayo, G.8
Pallotta, M.9
Tester, M.10
Langridge, P.11
-
51
-
-
60249091588
-
AtHMA3, a P1B-ATPase allowing Cd/Zn/Co/Pb vacuolar storage in Arabidopsis
-
10.1104/pp.108.130294, 2633814, 19036834
-
Morel M, Crouzet J, Gravot A, Auroy P, Leonhardt N, Vavasseur A, Richaud P. AtHMA3, a P1B-ATPase allowing Cd/Zn/Co/Pb vacuolar storage in Arabidopsis. Plant Physiol 2009, 149:894-904. 10.1104/pp.108.130294, 2633814, 19036834.
-
(2009)
Plant Physiol
, vol.149
, pp. 894-904
-
-
Morel, M.1
Crouzet, J.2
Gravot, A.3
Auroy, P.4
Leonhardt, N.5
Vavasseur, A.6
Richaud, P.7
-
52
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
Bailey TL, Elkan C. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol 1994, 2:28-36.
-
(1994)
Proc Int Conf Intell Syst Mol Biol
, vol.2
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
53
-
-
55749086044
-
Regulation of floral organ abscission in Arabidopsis thaliana
-
10.1073/pnas.0805539105, 2563077, 18809915
-
Cho SK, Larue CT, Chevalier D, Wang H, Jinn TL, Zhang S, Walker JC. Regulation of floral organ abscission in Arabidopsis thaliana. Proc Natl Acad Sci USA 2008, 105:15629-15634. 10.1073/pnas.0805539105, 2563077, 18809915.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 15629-15634
-
-
Cho, S.K.1
Larue, C.T.2
Chevalier, D.3
Wang, H.4
Jinn, T.L.5
Zhang, S.6
Walker, J.C.7
-
54
-
-
44449158107
-
The BLADE-ON-PETIOLE genes are essential for abscission zone formation in Arabidopsis
-
10.1242/dev.012807, 18339677
-
McKim SM, Stenvik GE, Butenko MA, Kristiansen W, Cho SK, Hepworth SR, Aalen RB, Haughn GW. The BLADE-ON-PETIOLE genes are essential for abscission zone formation in Arabidopsis. Development 2008, 135:1537-1546. 10.1242/dev.012807, 18339677.
-
(2008)
Development
, vol.135
, pp. 1537-1546
-
-
McKim, S.M.1
Stenvik, G.E.2
Butenko, M.A.3
Kristiansen, W.4
Cho, S.K.5
Hepworth, S.R.6
Aalen, R.B.7
Haughn, G.W.8
-
55
-
-
0033758843
-
Identification of BFN1, a bifunctional nuclease induced during leaf and stem senescence in Arabidopsis
-
10.1104/pp.122.1.169, 58855, 10631260
-
Perez-Amador MA, Abler ML, De Rocher EJ, Thompson DM, van Hoof A, LeBrasseur ND, Lers A, Green PJ. Identification of BFN1, a bifunctional nuclease induced during leaf and stem senescence in Arabidopsis. Plant Physiol 2000, 122:169-180. 10.1104/pp.122.1.169, 58855, 10631260.
-
(2000)
Plant Physiol
, vol.122
, pp. 169-180
-
-
Perez-Amador, M.A.1
Abler, M.L.2
De Rocher, E.J.3
Thompson, D.M.4
van Hoof, A.5
LeBrasseur, N.D.6
Lers, A.7
Green, P.J.8
-
56
-
-
51749100088
-
Expression analysis of the BFN1 nuclease gene promoter during senescence, abscission, and programmed cell death-related processes
-
10.1093/jxb/ern176, 2529240, 18603613
-
Farage-Barhom S, Burd S, Sonego L, Perl-Treves R, Lers A. Expression analysis of the BFN1 nuclease gene promoter during senescence, abscission, and programmed cell death-related processes. J Exp Bot 2008, 59:3247-3258. 10.1093/jxb/ern176, 2529240, 18603613.
-
(2008)
J Exp Bot
, vol.59
, pp. 3247-3258
-
-
Farage-Barhom, S.1
Burd, S.2
Sonego, L.3
Perl-Treves, R.4
Lers, A.5
-
57
-
-
48949107734
-
Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2
-
10.1104/pp.107.110908, 2259061, 18192438
-
Cai S, Lashbrook CC. Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. Plant Physiol 2008, 146:1305-1321. 10.1104/pp.107.110908, 2259061, 18192438.
-
(2008)
Plant Physiol
, vol.146
, pp. 1305-1321
-
-
Cai, S.1
Lashbrook, C.C.2
-
58
-
-
42149112836
-
The second intron of AGAMOUS drives carpel- and stamen-specific expression sufficient to induce complete sterility in Arabidopsis
-
10.1007/s00299-008-0511-3, 18256838
-
Liu Z, Liu Z. The second intron of AGAMOUS drives carpel- and stamen-specific expression sufficient to induce complete sterility in Arabidopsis. Plant Cell Rep 2008, 27:855-863. 10.1007/s00299-008-0511-3, 18256838.
-
(2008)
Plant Cell Rep
, vol.27
, pp. 855-863
-
-
Liu, Z.1
Liu, Z.2
-
59
-
-
0035045653
-
Reduction in allergenicity of grass pollen by genetic engineering
-
10.1159/000053666, 11306924
-
Bhalla PL, Swoboda I, Singh MB. Reduction in allergenicity of grass pollen by genetic engineering. Int Arch Allergy Immunol 2001, 124:51-54. 10.1159/000053666, 11306924.
-
(2001)
Int Arch Allergy Immunol
, vol.124
, pp. 51-54
-
-
Bhalla, P.L.1
Swoboda, I.2
Singh, M.B.3
-
60
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
61
-
-
0036909848
-
Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2 of Arabidopsis
-
10.1104/pp.010207, 166724, 12481096
-
Xiao YL, Malik M, Whitelaw CA, Town CD. Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2 of Arabidopsis. Plant Physiol 2002, 130:2118-28. 10.1104/pp.010207, 166724, 12481096.
-
(2002)
Plant Physiol
, vol.130
, pp. 2118-2128
-
-
Xiao, Y.L.1
Malik, M.2
Whitelaw, C.A.3
Town, C.D.4
|