-
1
-
-
1542347591
-
Antibiotic selection pressure and resistance in Streptococcus pneumoniae and Streptococcus pyogenes
-
Albrich WC, Monnet DL, Harbarth S (2004) Antibiotic selection pressure and resistance in Streptococcus pneumoniae and Streptococcus pyogenes. Emerg Infect Dis 10(3): 514-517.
-
(2004)
Emerg Infect Dis
, vol.10
, Issue.3
, pp. 514-517
-
-
Albrich, W.C.1
Monnet, D.L.2
Harbarth, S.3
-
2
-
-
36448959556
-
A multiscale model of biofilm as a senescence-structured fluid
-
Ayati BP, Klapper I (2007) A multiscale model of biofilm as a senescence-structured fluid. SIAM Multi Model Sim 6: 347-365.
-
(2007)
SIAM Multi Model Sim
, vol.6
, pp. 347-365
-
-
Ayati, B.P.1
Klapper, I.2
-
3
-
-
4644343922
-
Bacterial persistence as a phenotypic switch
-
Balaban NQ, Merrin J, Chait R, Kowalik L, Leibler S (2005) Bacterial persistence as a phenotypic switch. Science 305: 1622-1625.
-
(2005)
Science
, vol.305
, pp. 1622-1625
-
-
Balaban, N.Q.1
Merrin, J.2
Chait, R.3
Kowalik, L.4
Leibler, S.5
-
4
-
-
50349141358
-
Treatment of staphylococcal infections with penicillin by intermittent sterilisation
-
Bigger J (1944) Treatment of staphylococcal infections with penicillin by intermittent sterilisation. The Lancet 244: 497-500.
-
(1944)
The Lancet
, vol.244
, pp. 497-500
-
-
Bigger, J.1
-
5
-
-
30444453829
-
Effects of persister formation on bacterial response dosing
-
Cogan NG (2006) Effects of persister formation on bacterial response dosing. J Theor Biol 238: 694-703.
-
(2006)
J Theor Biol
, vol.238
, pp. 694-703
-
-
Cogan, N.G.1
-
6
-
-
34548015005
-
Incorporating toxin hypothesis into a mathematical model of persister formation and dynamics
-
Cogan NG (2007) Incorporating toxin hypothesis into a mathematical model of persister formation and dynamics. J Theor Biol 248: 340-349.
-
(2007)
J Theor Biol
, vol.248
, pp. 340-349
-
-
Cogan, N.G.1
-
7
-
-
44249127219
-
Structure of the scientific community modelling the evolution of resistance
-
Consortium R.E.X. doi:10.1371/journal.pone.0001275
-
Consortium REX (2007) Structure of the scientific community modelling the evolution of resistance. PLoS ONE 2(12): e1275. doi: 10. 1371/journal. pone. 0001275.
-
(2007)
PLoS ONE
, vol.2
, Issue.12
-
-
-
8
-
-
23444440823
-
Inactivation of antibiotics and the dissemination of resistance genes
-
Davies J (1994) Inactivation of antibiotics and the dissemination of resistance genes. Science 264: 375-382.
-
(1994)
Science
, vol.264
, pp. 375-382
-
-
Davies, J.1
-
9
-
-
35748982648
-
Modeling antibiotic resistance in hospitals: The impact of minimizing treatment duration
-
D'Agata EMC, Magal P, Olivier D, Ruan S, Webb GF (2007) Modeling antibiotic resistance in hospitals: the impact of minimizing treatment duration. J Theor Biol 249: 487-499.
-
(2007)
J Theor Biol
, vol.249
, pp. 487-499
-
-
D'Agata, E.M.C.1
Magal, P.2
Olivier, D.3
Ruan, S.4
Webb, G.F.5
-
10
-
-
58149193216
-
The impact of different antibiotic regimens on the emergence of antimicrobial-resistant bacteria
-
doi:10.1371/journal.pone.0004036
-
D'Agata EMC, Dupont-Rouzeyrol M, Magal P, Olivier D, Ruan S (2008) The impact of different antibiotic regimens on the emergence of antimicrobial-resistant bacteria. PLoS ONE 3(12): e4036. doi: 10. 1371/journal. pone. 0004036.
-
(2008)
PLoS ONE
, vol.3
, Issue.12
-
-
D'Agata, E.M.C.1
Dupont-Rouzeyrol, M.2
Magal, P.3
Olivier, D.4
Ruan, S.5
-
11
-
-
58749093735
-
Modeling the invasion of community-acquired methicillin-resistant Staphylococcus aureusi into the hospital setting
-
D'Agata EMC, Webb GF, Horn MA, Moellering RC Jr, Ruan S (2009) Modeling the invasion of community-acquired methicillin-resistant Staphylococcus aureusi into the hospital setting. Clin Infect Dis 48: 274-284.
-
(2009)
Clin Infect Dis
, vol.48
, pp. 274-284
-
-
D'Agata, E.M.C.1
Webb, G.F.2
Horn, M.A.3
Moellering Jr., R.C.4
Ruan, S.5
-
12
-
-
70349908259
-
Failure of antibiotic treatment in microbial populations
-
De Leenheer P, Cogan NG (2009) Failure of antibiotic treatment in microbial populations. J Math Biol 59(4): 563-579.
-
(2009)
J Math Biol
, vol.59
, Issue.4
, pp. 563-579
-
-
de Leenheer, P.1
Cogan, N.G.2
-
14
-
-
29244438446
-
Mathematical modeling: A tool for hospital infection control
-
Grundmann H, Hellriegel B (2006) Mathematical modeling: a tool for hospital infection control. Lancet Infect Dis 6: 39-45.
-
(2006)
Lancet Infect Dis
, vol.6
, pp. 39-45
-
-
Grundmann, H.1
Hellriegel, B.2
-
15
-
-
34248971890
-
Competitive exclusion principle
-
Hardin G (1960) Competitive exclusion principle. Science 131: 1292-1297.
-
(1960)
Science
, vol.131
, pp. 1292-1297
-
-
Hardin, G.1
-
16
-
-
84990581010
-
Differential equation models for some parasitic infections: Methods for the study of asymptotic behavior
-
Hirsch MW, Hanisch H, Gabriel J-P (1985) Differential equation models for some parasitic infections: methods for the study of asymptotic behavior. Comm Pure Appl Math 38: 733-753.
-
(1985)
Comm Pure Appl Math
, vol.38
, pp. 733-753
-
-
Hirsch, M.W.1
Hanisch, H.2
Gabriel, J.-P.3
-
17
-
-
34547489403
-
The pharmacodynamics of antibiotic treatment
-
Imran M, Smith HL (2006) The pharmacodynamics of antibiotic treatment. J Comp Math Meth Med 7: 229-263.
-
(2006)
J Comp Math Meth Med
, vol.7
, pp. 229-263
-
-
Imran, M.1
Smith, H.L.2
-
18
-
-
0346492817
-
Persister cells and tolerance to antimicrobials
-
Keren I, Kaldalu N, Spoering A, Wang Y, Lewis K (2004) Persister cells and tolerance to antimicrobials. FEMS Microbiol Lett 230: 13-18.
-
(2004)
FEMS Microbiol Lett
, vol.230
, pp. 13-18
-
-
Keren, I.1
Kaldalu, N.2
Spoering, A.3
Wang, Y.4
Lewis, K.5
-
19
-
-
36448953499
-
Senescence can explain microbial persistence
-
Klapper I, Gilbert P, Ayati BP, Dockery J, Stewart PS (2007) Senescence can explain microbial persistence. Microbiology 153: 3623-3630.
-
(2007)
Microbiology
, vol.153
, pp. 3623-3630
-
-
Klapper, I.1
Gilbert, P.2
Ayati, B.P.3
Dockery, J.4
Stewart, P.S.5
-
20
-
-
0028598147
-
Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat
-
Korona R, Nakatsu CH, Forney LJ, Lenski RE (1994) Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat. Proc Natl Acad Sci USA 91: 9037-9041.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 9037-9041
-
-
Korona, R.1
Nakatsu, C.H.2
Forney, L.J.3
Lenski, R.E.4
-
21
-
-
25444489027
-
Phenotypic diversity, population growth, and information in fluctuating environments
-
Kussell E, Leibler S (2005) Phenotypic diversity, population growth, and information in fluctuating environments. Science 309: 275-278.
-
(2005)
Science
, vol.309
, pp. 275-278
-
-
Kussell, E.1
Leibler, S.2
-
22
-
-
18844368812
-
Bacterial persistence: A model of survival in changing environments
-
Kussell E, Kishony R, Balaban NQ, Leibler S (2005) Bacterial persistence: a model of survival in changing environments. Genetics 169: 1807-1814.
-
(2005)
Genetics
, vol.169
, pp. 1807-1814
-
-
Kussell, E.1
Kishony, R.2
Balaban, N.Q.3
Leibler, S.4
-
23
-
-
0037299166
-
Mathematical modeling of viral kinetics: A tool to understand and optimize therapy
-
Layden T, Layden J, Ribeiro R, Perelson A (2003) Mathematical modeling of viral kinetics: a tool to understand and optimize therapy. Clin Liver Dis 7: 163-178.
-
(2003)
Clin Liver Dis
, vol.7
, pp. 163-178
-
-
Layden, T.1
Layden, J.2
Ribeiro, R.3
Perelson, A.4
-
24
-
-
0028990855
-
Coexistence of three microbial populations in a chemostat with periodically varying dilution rate
-
Lenas P, Pavlou S (1995) Coexistence of three microbial populations in a chemostat with periodically varying dilution rate. Math Biosci 129: 111-142.
-
(1995)
Math Biosci
, vol.129
, pp. 111-142
-
-
Lenas, P.1
Pavlou, S.2
-
25
-
-
0035885022
-
Minimizing potential resistance: A population dynamics view
-
Levin BR (2001) Minimizing potential resistance: a population dynamics view. Clin Infect Dis 33: S161-S169.
-
(2001)
Clin Infect Dis
, vol.33
-
-
Levin, B.R.1
-
26
-
-
10944272743
-
Antibacterial resistance worldwide: Causes, challenges and responses
-
Levy S, Marshall B (2004) Antibacterial resistance worldwide: causes, challenges and responses. Nat Med 10: S122-S129.
-
(2004)
Nat Med
, vol.10
-
-
Levy, S.1
Marshall, B.2
-
27
-
-
0035077009
-
Riddle of biofilm resistance
-
Lewis K (2001) Riddle of biofilm resistance. Antimicrob Agents Chemoth 45: 999-1007.
-
(2001)
Antimicrob Agents Chemoth
, vol.45
, pp. 999-1007
-
-
Lewis, K.1
-
28
-
-
33845607284
-
Persister cells, dormancy and infectious disease
-
Lewis K (2007) Persister cells, dormancy and infectious disease. Nat Rev Micro 5: 48-56.
-
(2007)
Nat Rev Micro
, vol.5
, pp. 48-56
-
-
Lewis, K.1
-
29
-
-
0031057479
-
The population dynamics of antimicrobial chemotherapy
-
Lipsitch M, Levin B (1997) The population dynamics of antimicrobial chemotherapy. Antimicrob Agents Chemother 41: 363-373.
-
(1997)
Antimicrob Agents Chemother
, vol.41
, pp. 363-373
-
-
Lipsitch, M.1
Levin, B.2
-
30
-
-
42949100420
-
Asymmetric segregation of protein aggregates is associated with cellular aging and rejuvenation
-
Lindner AB, Madden R, Demarez A, Stewart EJ, Taddei F (2008) Asymmetric segregation of protein aggregates is associated with cellular aging and rejuvenation. Proc Natl Acad Sci USA 105: 3076-3081.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 3076-3081
-
-
Lindner, A.B.1
Madden, R.2
Demarez, A.3
Stewart, E.J.4
Taddei, F.5
-
31
-
-
47749155981
-
Antibiotics and antibiotic resistance genes in natural environments
-
Martinez JL (2008) Antibiotics and antibiotic resistance genes in natural environments. Science 321: 365-367.
-
(2008)
Science
, vol.321
, pp. 365-367
-
-
Martinez, J.L.1
-
32
-
-
0020854842
-
Antimicrobial resistance in hospital organisms and its relation to antibiotic use
-
McGowan JE (1983) Antimicrobial resistance in hospital organisms and its relation to antibiotic use. Rev Inf Dis 5(6): 1033-1048.
-
(1983)
Rev Inf Dis
, vol.5
, Issue.6
, pp. 1033-1048
-
-
McGowan, J.E.1
-
33
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman H, Lawrence JG, Groisman EA (2000) Lateral gene transfer and the nature of bacterial innovation. Nature 405: 299-304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
34
-
-
0001918317
-
Mathematical analysis of HIV-1 dynamics in vivo
-
Perelson A, Nelson P (1999) Mathematical analysis of HIV-1 dynamics in vivo. SIAM Rev 41: 3-44.
-
(1999)
SIAM Rev
, vol.41
, pp. 3-44
-
-
Perelson, A.1
Nelson, P.2
-
35
-
-
36849045772
-
Management of multidrug-resistant organisms in health care settings, 2006
-
Siegel JD, Rhinehart E, Jackson M, Chiarello L (2007) Management of multidrug-resistant organisms in health care settings, 2006. Am J Infect Control 35: S165-S193.
-
(2007)
Am J Infect Control
, vol.35
-
-
Siegel, J.D.1
Rhinehart, E.2
Jackson, M.3
Chiarello, L.4
-
36
-
-
39449103059
-
The epidemic of antibiotic-resistant infections: A call to action for the medical community from the Infectious Diseases Society of America
-
Spellberg B, Guidos R, Gilbert D, Bradley J, Boucher HW, Scheld WM, Bartlett JG, Edwards J Jr (2008) The epidemic of antibiotic-resistant infections: a call to action for the medical community from the Infectious Diseases Society of America. Clin Infect Dis 46: 155-164.
-
(2008)
Clin Infect Dis
, vol.46
, pp. 155-164
-
-
Spellberg, B.1
Guidos, R.2
Gilbert, D.3
Bradley, J.4
Boucher, H.W.5
Scheld, W.M.6
Bartlett, J.G.7
Edwards Jr., J.8
-
38
-
-
22444452981
-
Perturbation of a globally stable steady state
-
Smith HL, Waltman P (1999) Perturbation of a globally stable steady state. Proc AMS 127: 447-453.
-
(1999)
Proc AMS
, vol.127
, pp. 447-453
-
-
Smith, H.L.1
Waltman, P.2
-
39
-
-
13944272143
-
Aging and death in an organism that reproduces by morphologically symmetric division
-
Stewart EJ, Madden R, Paul G, Taddei F (2005) Aging and death in an organism that reproduces by morphologically symmetric division. PLoS Comp Biol 3: 295-300.
-
(2005)
PLoS Comp Biol
, vol.3
, pp. 295-300
-
-
Stewart, E.J.1
Madden, R.2
Paul, G.3
Taddei, F.4
-
40
-
-
0039591930
-
Persistence under relaxed point-dissipativity (with application to an endemic model)
-
Thieme HR (1993) Persistence under relaxed point-dissipativity (with application to an endemic model). SIAM J Math Anal 24: 407-435.
-
(1993)
SIAM J Math Anal
, vol.24
, pp. 407-435
-
-
Thieme, H.R.1
-
42
-
-
39049113270
-
The rising impact of mathematical modeling in epidemiology: Antibiotic resistance research as a case study
-
Temime L, Hejblum G, Setbon M, Valleron AJ (2008) The rising impact of mathematical modeling in epidemiology: antibiotic resistance research as a case study. Epidemiol Infect 136: 289-298.
-
(2008)
Epidemiol Infect
, vol.136
, pp. 289-298
-
-
Temime, L.1
Hejblum, G.2
Setbon, M.3
Valleron, A.J.4
-
43
-
-
0030427959
-
Tests of ecological mechanisms promoting the stable coexistence of two bacterial genotypes
-
Turner PE, Souza V, Lenski RE (1996) Tests of ecological mechanisms promoting the stable coexistence of two bacterial genotypes. Ecology 77: 2119-2129.
-
(1996)
Ecology
, vol.77
, pp. 2119-2129
-
-
Turner, P.E.1
Souza, V.2
Lenski, R.E.3
-
44
-
-
0022225896
-
The stable coexistence of two competitors for one resource
-
Vance RR (1985) The stable coexistence of two competitors for one resource. Am Nat 126: 72-86.
-
(1985)
Am Nat
, vol.126
, pp. 72-86
-
-
Vance, R.R.1
-
45
-
-
0036845274
-
Reproduction numbers and sub-treshold endemic equilibria for compartmental models of disease transmission
-
van den Driessche P, Watmough J (2002) Reproduction numbers and sub-treshold endemic equilibria for compartmental models of disease transmission. Math Biosci 180: 29-48.
-
(2002)
Math Biosci
, vol.180
, pp. 29-48
-
-
van den Driessche, P.1
Watmough, J.2
-
46
-
-
33947505371
-
Antibiotic treatment in vitro of phenotypically tolerant bacterial populations
-
Wiuff C, Anderson D (2007) Antibiotic treatment in vitro of phenotypically tolerant bacterial populations. J Antimicrob Chemother 59: 254-263.
-
(2007)
J Antimicrob Chemother
, vol.59
, pp. 254-263
-
-
Wiuff, C.1
Anderson, D.2
|