Cassis: Detection of genomic rearrangement breakpoints

Bioinformatics

Volumn 26, Issue 15, 2010, Pages 1897-1898

  Baudet, Christian ^a,b   Lemaitre, Claire ^a,c   Dias, Zanoni ^b   Gautier, Christian ^a   Tannier, Eric ^a   Sagot, Marie France ^a  

^a UNIVERSITÉ LYON 1   (France)

^b UNIVERSITY OF CAMPINAS   (Brazil)

^c UNIVERSITÉ DE BORDEAUX   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGY; CHROMOSOME; CHROMOSOME BREAKAGE; COMPUTER PROGRAM; GENETIC RECOMBINATION; GENETICS; GENOME; METHODOLOGY; SYNTENY;

ALGORITHMS; CHROMOSOME BREAKPOINTS; CHROMOSOMES; COMPUTATIONAL BIOLOGY; GENOME; RECOMBINATION, GENETIC; SOFTWARE; SYNTENY;

EID: 77955019593     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq301     Document Type: Article

References (5)

1. Darling,A.C.E. et al. (2004) Mauve: alignment of conserved genomic sequence with rearrangements. Genome Res., 14, 1394-1403.
2. Harris,R.S. (2007) Improved pairwise alignment of genomic DNA. PhD Thesis, The Pennsylvania State Univeristy.
3. Lemaitre,C. et al. (2008) Precise detection of rearrangement breakpoints in mammalian chromosomes. BMC Bioinformatics, 9, 286.
4. Lemaitre,C. et al. (2009) Analysis of fine-scale mammalian evolutionary breakpoints provides new insight into their relation to genome organisation. BMC Genomics, 10, 335.
5. Pevzner,P. and Tesler,G. (2003) Genome rearrangements in mammalian evolution: lessons from human and mouse genomes. Genome Res., 13, 37-45.