The demographic histories of the M and S molecular forms of anopheles gambiae s.s.

Molecular Biology and Evolution

Volumn 27, Issue 8, 2010, Pages 1739-1744

  Crawford, Jacob E ^a   Lazzaro, Brian P ^a  

^a Department of Entomology Cornell University ^*  (United States)

Author keywords

Anopheles gambiae; demographic history; maximum likelihood; population genetics; population growth

Indexed keywords

AGRICULTURE; ANOPHELES GAMBIAE; BOTTLENECK POPULATION; DEMOGRAPHY; GENE LOCUS; MOLECULAR GENETICS; NONHUMAN; POPULATION GROWTH; POPULATION MIGRATION; REVIEW; SIMULATION; ANIMAL; BIOLOGICAL MODEL; CAMEROON; DISEASE CARRIER; EVOLUTION; GENETIC POLYMORPHISM; GENETICS; HUMAN; PARASITOLOGY; POPULATION GENETICS; STATISTICAL MODEL;

ANIMALS; ANOPHELES GAMBIAE; BIOLOGICAL EVOLUTION; CAMEROON; DEMOGRAPHY; GENETICS, POPULATION; HUMANS; INSECT VECTORS; LIKELIHOOD FUNCTIONS; MODELS, GENETIC; POLYMORPHISM, GENETIC;

EID: 77954995624     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msq070     Document Type: Review

References (30)

1. Alphey L, Beard CB, Billingsley P, et al. (23 co-authors). 2002. Malaria control with genetically manipulated insect vectors. Science 298:119-121.
2. Ayala FJ, Coluzzi M. 2005. Chromosome speciation: humans, Drosophila, and mosquitoes. Proc Natl Acad Sci USA. 102(1 Suppl):6535-6542.
3. Cohuet A, Krishnakumar S, Simard F, Morlais I, Koutsos A, Fontenille D, Mindrinos M, Kafatos FC. 2008. SNP discovery and molecular evolution in Anopheles gambiae, with special emphasis on innate immune system. BMC genomics. 9:227.
4. Collins FH, Paskewitz SM. 1995. Malaria: current and future prospects for control. Annu Rev Entomol. 40:195-219.
5. Coluzzi M, Sabatini A, della Torre A, Di Deco MA, Petrarca V. 2002. A polytene chromosome analysis of the Anopheles gambiae species complex. Science 298:1415-1418.
6. Costantini C, Ayala D, Guelbeogo WM, et al. (12 co-authors). 2009. Living at the edge: biogeographic patterns of habitat segregation conform to speciation by niche expansion in Anopheles gambiae. BMC Ecol. 9:16.
7. della Torre A, Fanello C, Akogbeto M, Dossou-Yovo J, Favia G, Petrarca V, Coluzzi M. 2001. Molecular evidence of incipient speciation within Anopheles gambiae ss in West Africa. Insect Mol Biol. 10:9-18.
8. della Torre A, Tu Z, Petrarca V. 2005. On the distribution and genetic differentiation of Anopheles gambiae ss molecular forms. Insect Biochem Mol Biol. 35:755-769.
9. Donnelly MJ, Licht MC, Lehmann T. 2001. Evidence for recent population expansion in the evolutionary history of the malaria vectors Anopheles arabiensis and Anopheles gambiae. Mol Biol Evol. 18:1353-1364.
10. Esnault C, Boulesteix M, Duchemin JB, et al. (12 co-authors). 2008. High genetic differentiation between the M and S molecular forms of Anopheles gambiae in Africa. PloS One. 3:e1968.
11. Fu YX, Li WH. 1993. Statistical tests of neutrality of mutations. Genetics 133:693-709.
12. Haddrill PR, Thornton KR, Charlesworth B, Andolfatto P. 2005. Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations. Genome Res. 15:790-799.
13. Keightley PD, Trivedi U, Thomson M, Oliver F, Kumar S, Blaxter ML. 2009. Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines. Genome Res. 19:1195-1201.
14. Kim Y, Stephan W. 2002. Detecting a local signature of genetic hitchhiking along a recombining chromosome. Genetics 160: 765-777.
15. Lehmann T, Hawley WA, Grebert H, Collins FH. 1998. The effective population size of Anopheles gambiae in Kenya: implications for population structure. Mol Biol Evol. 15:264-276.
16. Lehmann T, Licht M, Elissa N, Maega BTA, Chimumbwa JM, Watsenga FT, Wondji CS, Simard F, Hawley WA. 2003. Population structure of Anopheles gambiae in Africa. J Hered. 94:133-147.
17. Mukabayire O, Caridi J, Wang X, et al. 2001. Patterns of DNA sequence variation in chromosomally recognized taxa of Anopheles gambiae: evidence from rDNA and single-copy loci. Insect Mol Biol. 10:33-46.
18. Obbard DJ, Linton YM, Jiggins FM, Yan G, Little TJ. 2007. Population genetics of Plasmodium resistance genes in Anopheles gambiae: no evidence for strong selection. Mol Ecol. 16:3497.
19. Obbard DJ, Welch JJ, Little TJ. 2009. Inferring selection in the Anopheles gambiae species complex: an example from immune-related serine protease inhibitors. Malar J. 8:117.
20. Phillipson DW. 2005. African archaeology. Cambridge: Cambridge University Press. p. 202.
21. Reed F, Tishkoff S. 2006. African human diversity, origins and migrations. Curr Opin Genet Dev. 16:597-605.
22. Rogers AR, Harpending H. 1992. Population growth makes waves in the distribution of pairwise genetic differences. Mol Biol Evol. 9:552-569.
23. Slotman MA, Tripet F, Cornel AJ, et al. (11 co-authors). 2007. Evidence for subdivision within the M molecular form of Anopheles gambiae. Mol Ecol. 16:639-649.
24. Stajich JE, Hahn MW. 2005. Disentangling the effects of demography and selection in human history. Mol Biol Evol. 22:63-73.
25. Tajima F. 1989a. The effect of change in population size on DNA polymorphism. Genetics 123:597-601.
26. Tajima F. 1989b. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
27. Tamura K, Subramanian S, Kumar S. 2004. Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks. Mol Biol Evol. 21:36-44.
28. Weijers JWH, Schefuss E, Schouten S, Damste JSS. 2007. Coupled thermal and hydrological evolution of tropical Africa over the last deglaciation. Science 315:1701-1704.
29. Weiss G, von Haeseler A. 1998. Inference of population history using a likelihood approach. Genetics 149:1539-1546.
30. WHO/UNICEF World Malaria Report. 2008. World Malaria Report. Geneva (Switzerland): World Health Organization [cited 2009 Oct]. Available from: http://apps.who.int/malaria/wmr2008/.