Soil type-dependent responses to phenanthrene as revealed by determining the diversity and abundance of polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase genes by using a novel PCR detection system

Applied and Environmental Microbiology

Volumn 76, Issue 14, 2010, Pages 4765-4771

  Ding, Guo Chun ^a   Heuer, Holger ^a   Zühlke, Sebastian ^b   Spiteller, Michael ^b   Pronk, Geertje Johanna ^c   Heister, Katja ^c   Kögel Knabner, Ingrid ^c   Smalla, Kornelia ^a,d  

^a INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^b TU DORTMUND UNIVERSITY   (Germany)

^c TECHNICAL UNIVERSITY OF MUNICH   (Germany)

^d JKI   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMPLICONS; CLONING AND SEQUENCING; DIOXYGENASE GENES; DIOXYGENASES; GRAM-NEGATIVE BACTERIA; IN-SILICO; ORDER OF MAGNITUDE; PCR DETECTION; PCR PRIMERS; PRIMER SYSTEMS; QUANTITATIVE REAL TIME PCR; SEQUENCE ANALYSIS; SOIL BACTERIUM; SOIL TYPES;

ANTHRACENE; AROMATIC HYDROCARBONS; BACTERIA; BACTERIOLOGY; CLONING; ORGANIC COMPOUNDS; SOILS; TERNARY SYSTEMS;

GENES;

BACTERIAL PROTEIN; DIOXYGENASE; PHENANTHRENE; PHENANTHRENE DERIVATIVE; PRIMER DNA;

ABUNDANCE; BACTERIUM; CAMBISOL; GENE; LUVISOL; PAH; PHENANTHRENE; POLYMERASE CHAIN REACTION; SOIL MICROORGANISM; SOIL TYPE; SPECIES DIVERSITY;

ARTICLE; BACTERIUM; BIODIVERSITY; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; GENETICS; METABOLISM; METAGENOME; METHODOLOGY; MICROBIOLOGY; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; PROCEDURES;

BACTERIA; BACTERIAL PROTEINS; BIODIVERSITY; CLONING, MOLECULAR; CLUSTER ANALYSIS; DIOXYGENASES; DNA PRIMERS; METAGENOME; MOLECULAR SEQUENCE DATA; PHENANTHRENES; PHYLOGENY; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SOIL MICROBIOLOGY;

NEGIBACTERIA; POSIBACTERIA;

EID: 77954692062     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00047-10     Document Type: Article

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