Isolation and characterization of aniline degradation slightly halophilic bacterium, Erwinia sp. Strain HSA 6

Microbiological Research

Volumn 165, Issue 5, 2010, Pages 418-426

  Li, Junmin ^a   Jin, Zexin ^a   Yu, Binbin ^a  

^a TAIZHOU UNIVERSITY   (China)

Author keywords

Aniline degradation; Characteristics; Erwinia amylovora; Plasmid; Salinity tolerant

Indexed keywords

16S RDNA SEQUENCE; ANILINE CONCENTRATION; CARBON SOURCE; CONCENTRATION OF; CULTURE TIME; DEGRADATION CHARACTERISTICS; DEGRADATION RATE; DEGRADATION TEST; ELECTRON DONORS; ERWINIA; ERWINIA AMYLOVORA; GENE CLUSTERS; HALOPHILIC BACTERIA; ISOLATED STRAINS; ISOLATION AND CHARACTERIZATION; NACL CONCENTRATION; PCR AMPLIFICATION; PHYSIOLOGICAL PROPERTIES; PURE CULTURE; WASTEWATER CONCENTRATION;

AMPLIFICATION; ANILINE; BACTERIA; BACTERIOLOGY; CELL CULTURE; CONCENTRATION (PROCESS); PH EFFECTS; SALINITY MEASUREMENT; SODIUM CHLORIDE; WASTEWATER;

DEGRADATION;

AMMONIUM COMPOUND; BACTERIUM; BIODEGRADATION; GENE EXPRESSION; GENETIC ANALYSIS; MORPHOLOGY; PH; PLASMID; PROTEIN; SALINITY TOLERANCE; SODIUM CHLORIDE; TAXONOMY; WASTEWATER;

BACTERIA (MICROORGANISMS); ERWINIA; ERWINIA AMYLOVORA; ERWINIA SP.;

ANILINE; ANILINE DERIVATIVE;

ARTICLE; BIOREMEDIATION; CHEMISTRY; CLASSIFICATION; CULTURE MEDIUM; ERWINIA; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY;

ANILINE COMPOUNDS; BASE SEQUENCE; BIODEGRADATION, ENVIRONMENTAL; CULTURE MEDIA; ERWINIA; MOLECULAR SEQUENCE DATA; PHYLOGENY;

EID: 77954686231     PISSN: 09445013     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.micres.2009.09.003     Document Type: Article

References (34)

1. Alexander M., Lustigman B.K. Effect of chemical structure on microbial degradation of substituted benzenes. J Agric Food Chem 1966, 14:410-413.
2. Anson J.G., Mackinnon G. Novel Pseudomonas plasmid involved in aniline degradation. Appl Environ Microbiol 1984, 48:868-869.
3. Aoki K., Nakanishi Y., Murakami S., Shinke R. Microbial metabolism of aniline through a meta-cleavage pathway: isolation of strains and production of catechol 2, 3-dioxygenase. Agric Biol Chem 1990, 54:205-206.
4. Bathe S. Conjugal transfer of plasmid pNB2 to activated sludge bacteria leads to 3-chloroaniline degradation in enrichment cultures. Lett Appl Microbiol 2004, 38:527-531.
5. Boon N., Goris J., De Vos P., Verstraete W., Top E.M. Genetic diversity among 3-chloroaniline- and aniline-degrading strains of the Comamonadaceae. Appl Environ Microbiol 2001, 67:1107-1115.
6. Federal Register Priority Pollutant List (promulgated by the U.S. Environmental Protection Agency under authority of the Clean Water Act of 1977). Fed Regist 1979, 44:233.
7. Felsenstein J. PHYLIP (Phylogeny Inference Package), version 3.6a. Distributed by the author. Department of Genome Science, University of Washington, Seattle; 2002.
8. Fukumori F., Saint C.P. Nucleotide sequences and regulational analysis of genes involved in conversion of aniline to catechol in Pseudomonas putida UCC22 (pTDN1). J Bacteriol 1997, 179:399-408.
9. Fujii T., Takeo M., Maeda Y. Plasmid-encoded genes specifying aniline oxidation from Acinetobacter sp. strain YAA. Microbiology 1997, 143:93-99.
10. Geider K. Twenty years of molecular genetics with Erwinia amylovora: answers and new questions about eps-synthesis and other virulence factors. Acta Horticulturae 2006, 704:397-402.
11. Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequence. J Mol Evol 1980, 16:111-120.
12. Konopka A., Knight D., Turco R.F. Characterization of a Pseudomonas sp. capable of aniline degradation in the presence of secondary carbon sources. Appl Environ Microbiol 1989, 55:385-389.
13. Konopka A. Isolation and characterization of a subsurface bacterium that degrades aniline and methylanilines. FEMS Microbiol Lett 1993, 11:93-100.
14. Kubo M., Hiroe J., Murakami M., Fukami H., Tachiki T. Treatment of hypersaline-containing wastewater with salt-tolerant microorganisms. J Biosci Bioeng 2001, 91:222-224.
15. Kumar S., Tamura K., Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brif Bioinform 2004, 5:150-163.
16. Kushner DJ. Growth and nutrition of halophilic bacteria. In: Vreeland RH, Hochstein LI, editors. The biology of halophilic bacteria. 1993. p. 87-103.
17. Li W., Barrington S., Kim J. Biodegradation of pentyl amine and aniline from petrochemical wastewater. J Environ Manage 2007, 83:191-197.
18. Li J.M., Jin Z.X. A highly effective extraction method for PCR analysis of soil microbial DNA. Chin J Appl Ecol 2006, 17:2107-2111.
19. Li J.M., Jin Z.X. Isolation and determination of silver-resistant bacteria plasmids. Chin J Appl Ecol 2006, 17:305-308.
20. Liang Q., Takeo M., Chen M., Zhang W., Yu X., Lin M. Chromosome-encoded gene cluster for the metabolic pathway that converts aniline to TCA-cycle intermediates in Delftia tsuruhatensis AD9. Microbiology 2005, 151:3435-3446.
21. Liang Q.F., Chen M., Xu Y.Q., Zhang W., Ping S.Z., Lu W., et al. Functional identification of gene cluster for the aniline metabolic pathway mediated by transposable element. Chin Sci Bull 2005, 50:1720-1724.
22. Liu Z., Yang H., Huang Z., Zhou P., Liu S.J. Degradation of aniline by newly isolated, extremely aniline-tolerant Delftia sp. AN3. Appl Microbiol Biotechnol 2002, 58:679-682.
23. Loidl M., Hinteregger C., Ditzelmueller G., Ferschl A., Streichsbier F. Degradation of aniline and monochlorinated anilines by soil-borne Pseudomonas acidovorans strains. Arch Microbiol 1990, 155:56-61.
24. Lyons C.D., Katz S., Bartha R. Mechanisms and pathways of aniline elimination from aquatic environments. Appl Environ Microbiol 1984, 48:491-496.
25. McClure N.C., Venables W.A. pTDN1, a catabolic plasmid involved in aromatic amine catabolism in Pseudomonas putida mt-2. J Gen Microbiol 1987, 133:2073-2077.
26. Meyers N.L. Molecular cloning and partial characterization of the pathway for aniline degradation in Pseudomonas sp. strain CIT1. Curr Microbiol 1992, 24:303-310.
27. O'Neill F.J., Bromley-Challenor C.A., Greenwood R.J., Knapp J.S. Bacterial growth on aniline: implications for the biotreatment of industrial wastewater. Water Res 2000, 34:4397-4409.
28. Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4:406-425.
29. Selvakumaran S., Kapley A., Kalia V.C., Purohit H.J. Phenotypic and phylogenic groups to evaluate the diversity of Citrobacter isolates from activated biomass of effluent treatment plants. Bioresour Technol 2008, 99:1189-1195.
30. State Environmental Protection Administration Standard Methods for Water and Wastewater Monitoring and Analyzing 2002, China Environmental Science Press, Beijing. 4th Ed.
31. Takeo M., Fujii T., Takenaka K., Maeda Y. Cloning and sequencing of a gene cluster for the meta-cleavage pathway of aniline degradation in Acinetobacter sp. strain YAA. J Ferment Bioeng 1998, 85:514-517.
32. Thomas N.R., Koshy S., Simsek M., Abraham A.K. A precaution when preparing very large plasmids by alkaline lysis procedure. Appl Biochem Biotechnol 1988, 10:402-407.
33. Xu Y.S., Zhang Z., Li X.M. The study of plasmids of bacteria isolated from cyanide-containing areas. J Yunnan Univ 1997, 19:380-382.
34. Zhang T., Zhang J.L., Liu S.J., Liu Z.P. A novel and complete gene cluster involved in the degradation of aniline by Delftia sp. AN3. J Environ Sci 2008, 20:717-724.