메뉴 건너뛰기




Volumn 74, Issue 4, 2010, Pages 1157-1166

Simulated atmospheric nitrogen deposition alters actinobacterial community composition in forest soils

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA; ACTINOBACTERIA; ATMOSPHERIC NITROGEN DEPOSITION; BIOGEOCHEMICAL RESPONSE; CLONE LIBRARY; COMMUNITY ANALYSIS; COMMUNITY COMPOSITION; DISSOLVED ORGANIC C; FIELD STUDIES; FOREST FLOORS; FOREST SOILS; N DEPOSITION; PHYLOGENETIC DIVERSITY; PLANT LITTER; POLYPHENOLICS; QUANTITATIVE POLYMERASE CHAIN REACTION; SOIL ORGANIC MATTERS; SURFACE SOIL;

EID: 77954600237     PISSN: 03615995     EISSN: None     Source Type: Journal    
DOI: 10.2136/sssaj2009.0240     Document Type: Article
Times cited : (91)

References (46)
  • 1
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike, H. 1974. A new look at the statistical model identification. IEEE Trans. Autom. Control 19:716-723.
    • (1974) IEEE Trans. Autom. Control , vol.19 , pp. 716-723
    • Akaike, H.1
  • 2
    • 0019604458 scopus 로고
    • Effects of carbon and nitrogen supplementation on lignin and cellulose decomposition by Streptomyces
    • Bardner, M.J., and D.L. Crawford. 1981. Effects of carbon and nitrogen supplementation on lignin and cellulose decomposition by Streptomyces. Can. J. Microbiol. 27:859-887.
    • (1981) Can. J. Microbiol. , vol.27 , pp. 859-887
    • Bardner, M.J.1    Crawford, D.L.2
  • 3
    • 0030883267 scopus 로고    scopus 로고
    • Solubilisation and mineralization of 14C lignocellulose from wheat straw by Streptomyces cyaneus CECT 3335 during growth in solid-state fermentation
    • Berrocal, M.M., J. Rodriguez, A.S. Ball, M.I. Perez-Leblic, and M.E. Arias. 1997. Solubilisation and mineralization of 14C lignocellulose from wheat straw by Streptomyces cyaneus CECT 3335 during growth in solid-state fermentation. Appl. Microbiol. Biotechnol. 48:379-384.
    • (1997) Appl. Microbiol. Biotechnol. , vol.48 , pp. 379-384
    • Berrocal, M.M.1    Rodriguez, J.2    Ball, A.S.3    Perez-Leblic, M.I.4    Arias, M.E.5
  • 4
    • 26844559602 scopus 로고    scopus 로고
    • Phylum- And class-specific PCR primers for general microbial community analysis
    • Blackwood, C.B., A. Oaks, and J.S. Buyer. 2005. Phylum- and class-specific PCR primers for general microbial community analysis. Appl. Environ. Microbiol. 71:6193-6198.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 6193-6198
    • Blackwood, C.B.1    Oaks, A.2    Buyer, J.S.3
  • 6
    • 0001463548 scopus 로고
    • Non-parametric estimation of the number of classes in a population
    • Chao, A. 1984. Non-parametric estimation of the number of classes in a population. Scand. J. Stat. 87:265-270.
    • (1984) Scand. J. Stat. , vol.87 , pp. 265-270
    • Chao, A.1
  • 8
    • 2442472083 scopus 로고    scopus 로고
    • Atmospheric nitrate deposition, microbial community composition, and enzyme activity in northern hardwood forests
    • DeForest, J.L., D.R. Zak, K.S. Pregitzer, and A.J. Burton. 2004. Atmospheric nitrate deposition, microbial community composition, and enzyme activity in northern hardwood forests. Soil Biol. Biochem. 36:965-971.
    • (2004) Soil Biol. Biochem. , vol.36 , pp. 965-971
    • DeForest, J.L.1    Zak, D.R.2    Pregitzer, K.S.3    Burton, A.J.4
  • 10
    • 0029743085 scopus 로고    scopus 로고
    • Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR
    • D'Souza, T.M., K. Boominathan, and C.A. Reedy. 1996. Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR. Appl. Environ. Microbiol. 62:3739-3744.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 3739-3744
    • D'Souza, T.M.1    Boominathan, K.2    Reedy, C.A.3
  • 12
    • 46349095266 scopus 로고    scopus 로고
    • The occurrence of bioactive micromonosporae in aquatic habitats of the sunshine coast in Australia
    • Eccleston, C., P. Brooks, and D. Kurtboke. 2008. The occurrence of bioactive micromonosporae in aquatic habitats of the sunshine coast in Australia. Mar. Drugs 6:243-261.
    • (2008) Mar. Drugs , vol.6 , pp. 243-261
    • Eccleston, C.1    Brooks, P.2    Kurtboke, D.3
  • 13
    • 0037632906 scopus 로고    scopus 로고
    • Enzymological characterization of EpoA, a laccase-like phenol oxidase produced by Streptomyces griseus
    • Endo, K., Y. Hayashi, T. Hibi, K. Hosono, T. Beppu, and K. Ueda. 2003. Enzymological characterization of EpoA, a laccase-like phenol oxidase produced by Streptomyces griseus. Biochemistry 133:671-677.
    • (2003) Biochemistry , vol.133 , pp. 671-677
    • Endo, K.1    Hayashi, Y.2    Hibi, T.3    Hosono, K.4    Beppu, T.5    Ueda, K.6
  • 15
    • 0030762263 scopus 로고    scopus 로고
    • Ribosome analysis reveals prominent activity of an uncultured member of the class Actinobacteria in grassland soils
    • Felske, A., H. Rheims, A. Wolterink, E. Stackerbrandt, and A. Akkermans. 1997. Ribosome analysis reveals prominent activity of an uncultured member of the class Actinobacteria in grassland soils. Microbiology 143:2983-2989.
    • (1997) Microbiology , vol.143 , pp. 2983-2989
    • Felske, A.1    Rheims, H.2    Wolterink, A.3    Stackerbrandt, E.4    Akkermans, A.5
  • 18
    • 0344745136 scopus 로고
    • Degradation of kraft indulin lignin by Streptomyces viridosporus and Streptomyces badius
    • Giroux, H., P. Vidal, J. Bouchard, and S. Lammy. 1988. Degradation of kraft indulin lignin by Streptomyces viridosporus and Streptomyces badius. Appl. Environ. Microbiol. 54:3064-3070.
    • (1988) Appl. Environ. Microbiol. , vol.54 , pp. 3064-3070
    • Giroux, H.1    Vidal, P.2    Bouchard, J.3    Lammy, S.4
  • 24
    • 0028128513 scopus 로고
    • Nitrogen regulation of lignin peroxidase gene transcription
    • Li, D., M. Alic, and M.H. Gold. 1994. Nitrogen regulation of lignin peroxidase gene transcription. Appl. Environ. Microbiol. 60:3447-3449.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 3447-3449
    • Li, D.1    Alic, M.2    Gold, M.H.3
  • 25
    • 33748713890 scopus 로고    scopus 로고
    • UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
    • DOI 10.1186/1471-2105-7-371
    • Lozupone, C., M. Hamady, and R. Knight. 2006. UniFrac: An online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7:371. (Pubitemid 44390007)
    • (2006) BMC Bioinformatics , vol.7 , pp. 371
    • Lozupone, C.1    Hamady, M.2    Knight, R.3
  • 26
    • 29144464937 scopus 로고    scopus 로고
    • UniFrac: A new phylogenetic method for comparing microbial communities
    • Lozupone, C., and R. Knight. 2005. UniFrac: A new phylogenetic method for comparing microbial communities. Appl. Environ. Microbiol. 71:8228-8235.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 8228-8235
    • Lozupone, C.1    Knight, R.2
  • 29
    • 0008615985 scopus 로고
    • Identification of extracellular proteins from actinomycetes responsible for the solubilisation of lignocellulose
    • Mason, J., M. Richards, W. Zimmermann, and P. Broda. 1988. Identification of extracellular proteins from actinomycetes responsible for the solubilisation of lignocellulose. Appl. Microbiol. Biotechnol. 28:276-280.
    • (1988) Appl. Microbiol. Biotechnol. , vol.28 , pp. 276-280
    • Mason, J.1    Richards, M.2    Zimmermann, W.3    Broda, P.4
  • 31
    • 36148980100 scopus 로고    scopus 로고
    • Ecology of ligninolytic fungi associated with leaf litter decomposition
    • Osono, T. 2007. Ecology of ligninolytic fungi associated with leaf litter decomposition. Ecol. Res. 22:955-974.
    • (2007) Ecol. Res. , vol.22 , pp. 955-974
    • Osono, T.1
  • 32
    • 36849002455 scopus 로고    scopus 로고
    • Simulated chronic nitrogen deposition increases carbon storage in northern temperate forests
    • Pregitzer, K.S., A.J. Burton, D.R. Zak, and A.F. Talhelm. 2008. Simulated chronic nitrogen deposition increases carbon storage in northern temperate forests. Global Change Biol. 14:142-153.
    • (2008) Global Change Biol. , vol.14 , pp. 142-153
    • Pregitzer, K.S.1    Burton, A.J.2    Zak, D.R.3    Talhelm, A.F.4
  • 33
    • 3242741384 scopus 로고    scopus 로고
    • Chronic nitrate additions dramatically increase the export of carbon and nitrogen from northern hardwood ecosystems
    • Pregitzer, K.S., D.R. Zak, A.J. Burton, J.A. Ashby, and N.W. MacDonald. 2004. Chronic nitrate additions dramatically increase the export of carbon and nitrogen from northern hardwood ecosystems. Biogeochemistry 68:179-197.
    • (2004) Biogeochemistry , vol.68 , pp. 179-197
    • Pregitzer, K.S.1    Zak, D.R.2    Burton, A.J.3    Ashby, J.A.4    MacDonald, N.W.5
  • 34
    • 0001494267 scopus 로고
    • Extracellular enzyme activities during lignocellulose degradation by Streptomyces spp.: A comparative study of wild-type and genetically manipulated strains
    • Ramachandra, M., D.L. Crawford, and A.L. Pometto III. 1987. Extracellular enzyme activities during lignocellulose degradation by Streptomyces spp.: A comparative study of wild-type and genetically manipulated strains. Appl. Environ. Microbiol. 53:2754-2760.
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 2754-2760
    • Ramachandra, M.1    Crawford, D.L.2    Pometto III, A.L.3
  • 36
    • 40249113895 scopus 로고    scopus 로고
    • Evaluating different approaches that test whether microbial communities have the same structure
    • Schloss, P.D. 2008. Evaluating different approaches that test whether microbial communities have the same structure. ISMEJ. 2:265-275.
    • (2008) ISMEJ , vol.2 , pp. 265-275
    • Schloss, P.D.1
  • 37
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • Schloss, P.D., and J. Handelsman. 2005. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl. Environ. Microbiol. 71:1501-1506.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 38
    • 27644453285 scopus 로고    scopus 로고
    • Extracellular enzyme activities and soil organic matter dynamics for northern hardwood forests receiving simulated nitrogen deposition
    • Sinsabaugh, R.L., M.F. Gallo, C. Lauber, M.P. Waldrop, and D.R. Zak. 2005. Extracellular enzyme activities and soil organic matter dynamics for northern hardwood forests receiving simulated nitrogen deposition. Biogeochemistry 75:201-215.
    • (2005) Biogeochemistry , vol.75 , pp. 201-215
    • Sinsabaugh, R.L.1    Gallo, M.F.2    Lauber, C.3    Waldrop, M.P.4    Zak, D.R.5
  • 39
    • 33646269477 scopus 로고    scopus 로고
    • - deposition reduces the retention of leaf litter DOC in a northern hardwood forest soil
    • - deposition reduces the retention of leaf litter DOC in a northern hardwood forest soil. Soil Biol. Biochem. 38:1340-1347.
    • (2006) Soil Biol. Biochem. , vol.38 , pp. 1340-1347
    • Smemo, K.1    Zak, D.R.2    Pregitzer, K.S.3
  • 42
    • 0023105314 scopus 로고
    • Cloning and sequencing of a cDNA for a ligninase from Phanerochaete chrysosporium
    • Tien, M., and C.P.D. Tu. 1987. Cloning and sequencing of a cDNA for a ligninase from Phanerochaete chrysosporium. Nature 326:520-526.
    • (1987) Nature , vol.326 , pp. 520-526
    • Tien, M.1    Tu, C.P.D.2
  • 43
    • 0242554587 scopus 로고
    • Bacterial degradation of kraft lignin: Production and characterization of water-soluble intermediates derived from Streptomyces badius and Streptomyces viridosporus
    • N.G. Lewis and M.G. Paice (ed.) ACS Symp. Ser. 399. Am. Chem Soc., Washington, DC
    • Vidal, P.F., J. Bouchard, R.P. Overend, E. Chornet, H. Giroux, and F. Lamy. 1989. Bacterial degradation of kraft lignin: Production and characterization of water-soluble intermediates derived from Streptomyces badius and Streptomyces viridosporus. p. 529-543. In N.G. Lewis and M.G. Paice (ed.) Plant cell wall polymers: Biogenesis and biodegradation. ACS Symp. Ser. 399. Am. Chem Soc., Washington, DC.
    • (1989) Plant Cell Wall Polymers: Biogenesis and Biodegradation , pp. 529-543
    • Vidal, P.F.1    Bouchard, J.2    Overend, R.P.3    Chornet, E.4    Giroux, H.5    Lamy, F.6
  • 44
    • 0031816912 scopus 로고    scopus 로고
    • Actinomycete flora associated with submersed freshwater macrophytes
    • Wohl, D., and J. McArthur. 1998. Actinomycete flora associated with submersed freshwater macrophytes. FEMS Microbiol. Ecol. 26:135-140.
    • (1998) FEMS Microbiol. Ecol. , vol.26 , pp. 135-140
    • Wohl, D.1    McArthur, J.2
  • 46
    • 67651165968 scopus 로고    scopus 로고
    • An update of the structure and 16s rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa
    • Zhi, X.Y., W.J. Li, and E. Stackebrandt. 2009. An update of the structure and 16s rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa. Int. J. Syst. Evol. Microbiol. 59:589-608.
    • (2009) Int. J. Syst. Evol. Microbiol. , vol.59 , pp. 589-608
    • Zhi, X.Y.1    Li, W.J.2    Stackebrandt, E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.