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Volumn 11, Issue 5, 2010, Pages 332-341

Analysis of genetic diversity in banana cultivars (Musa cvs.) from the South of Oman using AFLP markers and classification by phylogenetic, hierarchical clustering and principal component analyses

Author keywords

Amplified fragment length polymorphism (AFLP); Genetic diversity; Hierarchical clustering analysis (HCA); Musa; Oman; Phylogenetics; Principal component analysis (PCA)

Indexed keywords

MOLECULAR MARKER;

EID: 77954555267     PISSN: 16731581     EISSN: 18621783     Source Type: Journal    
DOI: 10.1631/jzus.B0900310     Document Type: Article
Times cited : (42)

References (34)
  • 1
    • 0043204289 scopus 로고    scopus 로고
    • AFLP data and the origins of domesticated crops
    • doi:10. 1139/g03-025
    • Allaby, R.G., Brown, T.A., 2003. AFLP data and the origins of domesticated crops. Genome, 46(3):448-453. [doi:10. 1139/g03-025]
    • (2003) Genome , vol.46 , Issue.3 , pp. 448-453
    • Allaby, R.G.1    Brown, T.A.2
  • 2
    • 0028826995 scopus 로고
    • DNA profiling of banana and plantain cultivars using random amplified polymorphic DNA (RAPD) and restriction fragment length polymorphism (RFLP) markers
    • doi:10.1002/elps.11501601287
    • Bhat, K.V., Jarret, R.L., Rana, R.S., 1995. DNA profiling of banana and plantain cultivars using random amplified polymorphic DNA (RAPD) and restriction fragment length polymorphism (RFLP) markers. Electrophoresis, 16(1):1736-1745. [doi:10.1002/elps.11501601287]
    • (1995) Electrophoresis , vol.16 , Issue.1 , pp. 1736-1745
    • Bhat, K.V.1    Jarret, R.L.2    Rana, R.S.3
  • 3
    • 4143053852 scopus 로고    scopus 로고
    • AFLP characterization and genetic diversity analysis of Indian banana and plantain cultivars (Musa spp.)
    • doi:10. 1079/PGR200440
    • Bhat, K.V., Amaravathi, Y., Guatam, P.L., Velayudhan, K.C., 2004. AFLP characterization and genetic diversity analysis of Indian banana and plantain cultivars (Musa spp.). Plant Genetic Resources, 2(2):121-130. [doi:10. 1079/PGR200440]
    • (2004) Plant Genetic Resources , vol.2 , Issue.2 , pp. 121-130
    • Bhat, K.V.1    Amaravathi, Y.2    Guatam, P.L.3    Velayudhan, K.C.4
  • 5
    • 0000479431 scopus 로고
    • A rapid total DNA preparation procedure for fresh plant tissue
    • Doyle, J.J., Doyle, J.L., 1990. A rapid total DNA preparation procedure for fresh plant tissue. Focus, 12:13-15.
    • (1990) Focus , vol.12 , pp. 13-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 7
    • 0000122573 scopus 로고
    • PHYLIP-phylogeny inference package (version 3.2)
    • doi:10.1111/j. 1096-0031.1989.tb00562.x
    • Felsenstein, J., 1989. PHYLIP-phylogeny inference package (version 3.2). Cladistics, 5(2):163-166. [doi:10.1111/j. 1096-0031.1989.tb00562.x]
    • (1989) Cladistics , vol.5 , Issue.2 , pp. 163-166
    • Felsenstein, J.1
  • 8
    • 0000763669 scopus 로고
    • Restriction fragment length polymorphism (RFLP)-based phylogenetic analysis of Musa
    • doi:10.1007/BF00229484
    • Gawel, N.J., Jarret, R.L., 1992. Restriction fragment length polymorphism (RFLP)-based phylogenetic analysis of Musa. Theor. Appl. Genet., 84(3-4):286-290. [doi:10.1007/BF00229484]
    • (1992) Theor. Appl. Genet. , vol.84 , Issue.3-4 , pp. 286-290
    • Gawel, N.J.1    Jarret, R.L.2
  • 9
    • 0030858166 scopus 로고    scopus 로고
    • Application of inter-simple sequence repeat (ISSR) markers to plant genetics
    • doi:10.1002/ elps.1150180906
    • Godwin, I.D., Aitken, E.A.B., Smith, L.W., 1997. Application of inter-simple sequence repeat (ISSR) markers to plant genetics. Electrophoresis, 18(9):1524-1528. [doi:10.1002/ elps.1150180906]
    • (1997) Electrophoresis , vol.18 , Issue.9 , pp. 1524-1528
    • Godwin, I.D.1    Aitken, E.A.B.2    Smith, L.W.3
  • 10
    • 0031806236 scopus 로고    scopus 로고
    • Diploid Musa acuminata genetic diversity assayed with sequence-tagged microsatellite sites
    • DOI 10.1002/elps.1150190829
    • Grapin, A., Noyer, J.L., Carrel, F., Dambler, D., Baurens, F.C., Lanaud, C., Lagoda, P.J.L., 1998. Diploid Musa acuminate genetic diversity assayed with sequence-tagged mi-crosatellite sites. Electrophoresis, 19(8-9):1374-1380. [doi:10.1002/elps.1150190829] (Pubitemid 28310848)
    • (1998) Electrophoresis , vol.19 , Issue.8-9 , pp. 1374-1380
    • Grapin, A.1    Noyer, J.-L.2    Carreel, F.3    Dambier, D.4    Baurens, F.-C.5    Lanaud, C.6    Lagoda, P.J.L.7
  • 11
    • 33846809377 scopus 로고    scopus 로고
    • Genetic distance sampling: A novel sampling method for obtaining core collections using genetic distances with an application to cultivated lettuce
    • DOI 10.1007/s00122-006-0433-9
    • Jansen, J., van Hintum, T., 2007. Genetic distance sampling: a novel sampling method for obtaining core collections using genetic distances with an application to cultivated lettuce. Theor. Appl. Genet., 114(3):421-428. [doi:10.1007/s00122-006-0433-9] (Pubitemid 46211989)
    • (2007) Theoretical and Applied Genetics , vol.114 , Issue.3 , pp. 421-428
    • Jansen, J.1    Van Hintum, Th.2
  • 12
    • 34250743615 scopus 로고    scopus 로고
    • Comparative assessment of genetic diversity of peanut (Arachis hypogaea L.) genotypes with various levels of resistance to bacterial wilt through SSR and AFLP analyses
    • DOI 10.1016/S1673-8527(07)60060-5, PII S1673852707600605
    • Jiang, H., Liao, B., Ren, X., Lei, Y., Mace, E., Fu, T., Crouch, J.H., 2007. Comparative assessment of genetic diversity of peanut (Arachis hypogaea L.) genotypes with various levels of resistance to bacterial wilt through SSR and AFLP analyses. J. Genet. Genomics, 34(6):544-554. [doi:10.1016/S1673- 8527(07)60060-5] (Pubitemid 46963729)
    • (2007) Journal of Genetics and Genomics , vol.34 , Issue.6 , pp. 544-554
    • Jiang, H.1    Liao, B.2    Ren, X.3    Lei, Y.4    Mace, E.5    Fu, T.6    Crouch, J.H.7
  • 13
    • 0034503809 scopus 로고    scopus 로고
    • Amplified fragment length polymorphism fingerprinting of 16 banana cultivars (Musa cvs.)
    • DOI 10.1006/mpev.2000.0848
    • Loh, J.P., Kiew, R., Set, O., Gan, L.H., Gan, Y.Y., 2000. Amplified fragment length polymorphism fingerprinting of 16 banana cultivars (Musa cvs.). Mol. Phylogenetics Evol, 17(3):360-366. [doi:10.1006/mpev.2000.0848] (Pubitemid 32065240)
    • (2000) Molecular Phylogenetics and Evolution , vol.17 , Issue.3 , pp. 360-366
    • Loh, J.P.1    Kiew, R.2    Set, O.3    Gan, L.H.4    Gan, Y.-Y.5
  • 15
    • 34547211716 scopus 로고    scopus 로고
    • Hybrids between cultivated and wild carrots in natural populations in Denmark
    • DOI 10.1038/sj.hdy.6800982, PII 6800982
    • Magnussen, L.S., Hauser, T.P., 2007. Hybrids between cultivated and wild carrots in natural populations in Denmark. Heredity, 99(2):185-192. [doi:10.1038/sj.hdy.6800982] (Pubitemid 47123473)
    • (2007) Heredity , vol.99 , Issue.2 , pp. 185-192
    • Magnussen, L.S.1    Hauser, T.P.2
  • 16
    • 0001554559 scopus 로고
    • Improved selectivity in spectroscopy by multivariate calibration
    • doi:10.1002/cem.1180010403
    • Martens, H., Karstang, T., Nass, T., 1987. Improved selectivity in spectroscopy by multivariate calibration. J. Chemom., 1(4):201-219. [doi:10.1002/cem.1180010403]
    • (1987) J. Chemom. , vol.1 , Issue.4 , pp. 201-219
    • Martens, H.1    Karstang, T.2    Nass, T.3
  • 17
    • 33645857948 scopus 로고    scopus 로고
    • Domestication and the distribution of genetic variation in wild and cultivated populations of the mesoamerican fruit tree Spondias purpurea L. (Anacardiaceae)
    • doi:10.1111/j.1365-294X.2006.02834.x
    • Miller, A.J., Schaal, B.A., 2006. Domestication and the distribution of genetic variation in wild and cultivated populations of the Mesoamerican fruit tree Spondias purpurea L. (Anacardiaceae). Mol. Ecol, 15(6):1467-1480. [doi:10.1111/j.1365-294X.2006.02834.x]
    • (2006) Mol. Ecol , vol.15 , Issue.6 , pp. 1467-1480
    • Miller, A.J.1    Schaal, B.A.2
  • 18
    • 2942700213 scopus 로고    scopus 로고
    • Inheritance of the Md-ACS1 gene and its relationship to fruit softening in apple (Malus x domestica Borkh.)
    • DOI 10.1007/s00122-003-1574-8
    • Oraguzie, N.C., Iwanami, H., Soejima, J., Harada, T., Hall, A., 2004. Inheritance of the Md-ACSl gene and its relationship to fruit softening in apple (Malusxdomestica Borkh). Theor. Appl. Genet., 108(8):1526-1533. [doi:10.1007/s00122-003-1574-8] (Pubitemid 38791260)
    • (2004) Theoretical and Applied Genetics , vol.108 , Issue.8 , pp. 1526-1533
    • Oraguzie, N.C.1    Iwanami, H.2    Soejima, J.3    Harada, T.4    Hall, A.5
  • 19
    • 17644418767 scopus 로고    scopus 로고
    • DNA fingerprinting of apple (Malus spp.) rootstocks using Simple Sequence Repeats
    • DOI 10.1111/j.1439-0523.2004.01064.x
    • Oraguzie, N.C., Yamamoto, T., Soejima, J., Suzuki, T., de Silva, N., 2005. DNA fingerprinting of apple (Malus spp.) rootstocks using simple sequence repeats. Plant Breeding, 124(2):197-202. [doi:10.1111/j.1439-0523.2004.01064.x] (Pubitemid 40561077)
    • (2005) Plant Breeding , vol.124 , Issue.2 , pp. 197-202
    • Oraguzie, N.C.1    Yamamoto, T.2    Soejima, J.3    Suzuki, T.4    De Silva, H.N.5
  • 21
    • 0034973841 scopus 로고    scopus 로고
    • Analysis of genetic diversity and relationships in East African banana germplasm
    • DOI 10.1007/s001220000500
    • Pillay, M., Ogundiwin, E., Nwakanma, D.C., Ude, G., Tenk-ouano, A., 2001. Analysis of genetic diversity and relationships in east African banana germplasm. Theor. Appl. Genet., 102(6-7):965-970. [doi:10.1007/s001220000500] (Pubitemid 32532699)
    • (2001) Theoretical and Applied Genetics , vol.102 , Issue.6-7 , pp. 965-970
    • Pillay, M.1    Ogundiwin, E.2    Nwakanma, D.C.3    Ude, G.4    Tenkouano, A.5
  • 22
    • 34250843345 scopus 로고    scopus 로고
    • Genetic variation in banana cul-tivar 'Sukali Nidzi' grown in different regions of Uganda
    • Pillay, M., Dimpka, C., Ude, G.N., Makumbi, D., Tu-shemereirwe, W., 2003. Genetic variation in banana cul-tivar 'Sukali Nidzi' grown in different regions of Uganda. Afr. CropSci. J., 11(2):87-95.
    • (2003) Afr. CropSci. J. , vol.11 , Issue.2 , pp. 87-95
    • Pillay, M.1    Dimpka, C.2    Ude, G.N.3    Makumbi, D.4    Tu-Shemereirwe, W.5
  • 23
    • 7844227430 scopus 로고    scopus 로고
    • The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis
    • doi:10.1007/BF00564200
    • Powell, W., Morgante, M., Andre, C., Hanafey, M., Vogel, J., Tingey, S., Rafalski, A., 1996. The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol. Breed., 2(3):225-238. [doi:10.1007/ BF00564200]
    • (1996) Mol. Breed. , vol.2 , Issue.3 , pp. 225-238
    • Powell, W.1    Morgante, M.2    Andre, C.3    Hanafey, M.4    Vogel, J.5    Tingey, S.6    Rafalski, A.7
  • 25
    • 0032920932 scopus 로고    scopus 로고
    • Comparison of DNA marker and pedigree-based methods of genetic analysis of plantain and banana (Musa spp.) clones. I. Estimation of genetic relationships
    • DOI 10.1007/s001220051040
    • Tenkouano, A., Crouch, J.H., Crouch, H.K., Vuylsteke, D., Ortiz, R., 1999. Comparison of DNA marker and pedigree-based methods of genetic analysis in plantain and banana (Musa spp.) clones. I. Estimation of genetic relationships. Theor. Appl. Genet., 98(1):62-68. [doi:10.1007/ s001220051040] (Pubitemid 29167218)
    • (1999) Theoretical and Applied Genetics , vol.98 , Issue.1 , pp. 62-68
    • Tenkouano, A.1    Crouch, J.H.2    Crouch, H.K.3    Vuylsteke, D.4    Ortiz, R.5
  • 27
    • 0036929337 scopus 로고    scopus 로고
    • Analysis of genetic diversity and sectional relationships in musa using AFLP markers
    • doi:10.1007/s00122-001 - 0802-803
    • Ude, G., Pillay, M., Nwakanma, D., Tenkouano, A., 2002a. Analysis of genetic diversity and sectional relationships in Musa using AFLP markers. Theor. Appl. Genet., 104(8):1239-1245. [doi:10.1007/s00122-001 -0802-803]
    • (2002) Theor. Appl. Genet. , vol.104 , Issue.8 , pp. 1239-1245
    • Ude, G.1    Pillay, M.2    Nwakanma, D.3    Tenkouano, A.4
  • 28
    • 0036931644 scopus 로고    scopus 로고
    • Genetic Diversity in Musa acuminata Colla and Musa balbisiana Colla and some of their natural hybrids using AFLP Markers
    • DOI 10.1007/s00122-002-0914-4
    • Ude, G., Pillay, M., Nwakanma, D., Tenkouano, A., 2002b. Genetic diversity in Musa acuminata Colla and Musa balbisiana Colla and some of their natural hybrids using AFLP markers. Theor. Appl. Genet, 104(8):1246-1252. [doi:10.1007/s00122-002-0914-4] (Pubitemid 36059375)
    • (2002) Theoretical and Applied Genetics , vol.104 , Issue.8 , pp. 1246-1252
    • Ude, G.1    Pillay, M.2    Nwakanma, D.3    Tenkouano, A.4
  • 29
    • 0042709295 scopus 로고    scopus 로고
    • Genetic diversity in an African plantain core collection using AFLP and RAPD markers
    • DOI 10.1007/s00122-003-1246-8
    • Ude, G., Ogundiwin, E., Pillay, M., Tenkouano, A., 2003. Genetic diversity in an African Plantain core collection using AFLP and RAPD markers. Theor. Appl. Genet., 107(2):248-255. [doi:10.1007/s00122-003-1246-8] (Pubitemid 36922303)
    • (2003) Theoretical and Applied Genetics , vol.107 , Issue.2 , pp. 248-255
    • Ude, G.1    Pillay, M.2    Ogundiwin, E.3    Tenkouano, A.4
  • 33
    • 34447094769 scopus 로고    scopus 로고
    • Genetic diversity of wild banana (Musa balbisiana Colla) in China as revealed by AFLP markers
    • DOI 10.1007/s10722-006-9004-9
    • Wang, X.L., Chiang, T.Y., Roux, N., Hao, G.X., 2007. Genetic diversity of wild banana (Musa balbisiana Colla) in China as revealed by AFLP markers. Genet. Resour. Crop Evol, 54(5):1125-1132. [doi:10.1007/s10722-006-9004-9] (Pubitemid 47030047)
    • (2007) Genetic Resources and Crop Evolution , vol.54 , Issue.5 , pp. 1125-1132
    • Wang, X.-L.1    Chiang, T.-Y.2    Roux, N.3    Hao, G.4    Ge, X.-J.5
  • 34
    • 0036326774 scopus 로고    scopus 로고
    • Assessment of the validity of the sections in Musa (Musaceae) using AFLP
    • DOI 10.1093/aob/mcf170
    • Wong, C., Kiew, R., Set, O., Argent, G., Lee, S.K., Gan, Y.Y., 2002. Assessment of the validity of the sections in Musa (Musaceae) using AFLP. Ann. Bot, 90(2):231-238. [doi: 10.1093/aob/mcf170] (Pubitemid 34842201)
    • (2002) Annals of Botany , vol.90 , Issue.2 , pp. 231-238
    • Wong, C.1    Kiew, R.2    Argent, G.3    Set, O.4    Lee, S.K.5    Gan, Y.Y.6


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