Semi-automated library preparation for high-throughput DNA sequencing platforms

Journal of Biomedicine and Biotechnology

Volumn 2010, Issue , 2010, Pages

  Farias Hesson, Eveline ^a   Erikson, Jonathan ^a   Atkins, Alexander ^a   Shen, Peidong ^b   Davis, Ronald W ^b   Scharfe, Curt ^b   Pourmand, Nader ^a  

^a University of California Santa Cruz   (United States)

^b STANFORD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DISORDERS OF MITOCHONDRIAL FUNCTIONS; DNA SEQUENCE; GENE LIBRARY; HUMAN; PHENOTYPE; POLYMERASE CHAIN REACTION; POPULATION GENETICS; AUTOMATION; EXON; GENETIC MARKER; GENETICS; HIGH THROUGHPUT SCREENING; INSTRUMENTATION; METHODOLOGY;

DNA;

AUTOMATION; DNA; EXONS; GENE LIBRARY; GENETIC MARKERS; HIGH-THROUGHPUT SCREENING ASSAYS; HUMANS; SEQUENCE ANALYSIS, DNA;

EID: 77954551785     PISSN: 11107243     EISSN: 11107251     Source Type: Journal    
DOI: 10.1155/2010/617469     Document Type: Article

References (15)

1. Gupta P. K., Single-molecule DNA sequencing technologies for future genomics research Trends in Biotechnology 2008 26 11 602 611
2. Holt R. A., Jones S. J. M., The new paradigm of flow cell sequencing Genome Research 2008 18 6 839 846
3. ten Bosch J. R., Grody W. W., Keeping up with the next generation: massively parallel sequencing in clinical diagnostics Journal of Molecular Diagnostics 2008 10 6 484 492
4. Mardis E. R., The impact of next-generation sequencing technology on genetics Trends in Genetics 2008 24 3 133 141
5. Siva N., 1000 Genomes project Nature Biotechnology 2008 26 3, article 256
6. Tang F., Barbacioru C., Wang Y., mRNA-Seq whole-transcriptome analysis of a single cell Nature Methods 2009 6 5 377 382
7. Goossens E., de Rycke M., Haentjens P., Tournaye H., DNA methylation patterns of spermatozoa and two generations of offspring obtained after murine spermatogonial stem cell transplantation Human Reproduction 2009 24 9 2255 2263
8. Cloonan N., Forrest A. R. R., Kolle G., Stem cell transcriptome profiling via massive-scale mRNA sequencing Nature Methods 2008 5 7 613 619
9. Lennon N. J., Lintner R. E., Anderson S., A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454 Genome Biology 2010 11 2, article R15
10. Lundeberg J., Klevebring D., Gry M., Lindberg J., Eidefors A., Automation of cDNA synthesis and labelling improves reproducibility Journal of Biomedicine and Biotechnology 2009 2009 7
11. Scharfe C., Lu H. H.-S., Neuenburg J. K., Mapping gene associations in human mitochondria using clinical disease phenotypes PLoS Computational Biology 2009 5 4
12. Kent W. J., BLATthe BLAST-like alignment tool Genome Research 2002 12 4 656 664
13. Harismendy O., Ng P. C., Strausberg R. L., Evaluation of next generation sequencing platforms for population targeted sequencing studies Genome Biology 2009 10 3, article R32
14. Henry R. J., Oono K., Amplification of a GC-rich sequence from barley by a two-step polymerase chain reaction in glycerol Plant Molecular Biology Reporter 1991 9 2 139 144
15. Caruccio N., Grunenwald H., Syed F., Nextera TM technology for NGS DNA library preparation: simultaneous fragmentation and tagging by in vitro transposition Nature Methods 2009 16 3