Genetic variation of hoplolaimus columbus populations in the United States using PCR-RFLP analysis of nuclear rDNA ITS regions

Journal of Nematology

Volumn 41, Issue 3, 2009, Pages 187-193

  Bae, C H ^a,b   Szalansk, A L ^b   Robbins, R T ^a  

^a National Institute of Biological Resources   (South Korea)

^b UNIVERSITY OF ARKANSAS   (United States)

Author keywords

Haplotypes; Hoplolaimus columbus; Its region; Lance; Nematode; PCR RFLP

Indexed keywords

GLYCINE MAX; GOSSYPIUM HIRSUTUM; HOPLOLAIMUS COLUMBUS; ZEA MAYS;

EID: 77954320023     PISSN: 0022300X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (29)

1. Al-Banna, L., Willamson, V., and Gardner, S. L. 1997. Phylogenetic analysis of nematodes of the genus Pratylenchus using nuclear 26S rDNA. Molecualr Phylogenetics and Evolution 7:94-102.
2. Blok, V. C., Malloch, G., Harrower, B., Phillips, M. S., and Vrain, T. C. 1998. Intraspecific variation in ribosomal DNA in populations of the potato cyst nematode Globodera pallida. Journal of Nematology 30: 262-274.
3. Castagnone-Sereno, P. 2006. Genetic variability and adaptive evolution in parthenogenetic root-knot nematodes. Heredity 96: 282-289.
4. Cherry, T., Szalanski, A. L., Todd, T. C., and Powers, T. O. 1997. The internal transcribed Spacer region of Belonolaimus (Nemata; Belonolaimidae). Journal of Nematology 29: 23-29.
5. De Luca, F., Reyes, A., Gründer, J., Kunz, P., Agostinelli, A., De Giorgi, C., and Lamberti, F. 2004. Characterization and sequence variation in the rDNA region of six nematode species of the Genus Longidorus (Nematoda). Journal of Nematology 36:147-152. (Pubitemid 39160929)
6. Dover, G. 1982. A molecular drive through evolution. Bioscience 32:526-533.
7. Dover, G., and Coen, E. 1981. Spring-cleaning ribosomal DNA; a model for multigene evolution?. Nature 290:731-732. (Pubitemid 11068037)
8. Ellis, R. E., Sulston, J. E., and Coulson, A. R. 1986. The rDNA of C. elegans. sequence and structure. Nucleic Acids Res 14:2345-2364.
9. Fassuliotis, G. 1974. Host range of the Columbia lance nematode Hoplolaimus columbus. Plant Disease Reporter 58:1000-1002.
10. Gandolfi, A., Bonilauri, P., Rossi, V., and Menozzi, P. 2001. Intraindividual and intraspecies variability of ITSl sequences in the ancient asexual Darwinula stevensoni (Crustacea; Ostracoda). Heredity 87:449-455.
11. Handoo, Z. A., and Golden, A. M. 1992. A Key and Diagnostic Compendium to the Species of the Genus Hoplolaimus Daday, 1905 (Nematoda: Hoplolaimidae). Journal of Nematology 24:45-53.
12. Hillis, D. M., and Dixon, M. 1991. Ribosomal DNA: molecular evolution and phylogenetic inference. The Quarterly Review of Biology 66:411-446. (Pubitemid 21916771)
13. Hugall, A., Stanton, J., and Mortiz, C. 1999. Reticulate Evolution and the origins of Ribosomal internal transcribed spacer diversity in apomictic Meloidogyne. Molecular Biology and Evolution 16:157-164. (Pubitemid 29091673)
14. Ibrahim, S. K., Perry, R. N., Burrows, P. R., and Hooper, D.J. 1994. Differentiation of species and populations of Ditylenchus angustus using a Fragment of Ribosomal DNA. Journal of Nematology 26:412-421.
15. Lewis, S. A., Smith, F. H., and Powell, W. M. 1976. Host-Parasite relationships of Hoplolaimus Columbus on cotton and soybean. Journal of Nematology 8 (2): 142-145.
16. Kearney, M. 2003. Why is sex so unpopular in the Australian desert?. Trends in Ecology and Evolution 18:605-607. (Pubitemid 37399477)
17. Koenning, S. R., Kikpatrick, T. L., Starr, J. L., Wrather, J. A., Walker, N. R., and Mueller, J. D. 2004. Plant-parasitic nematodes attacking cotton in United States; old and emerging production challenges. Plant disease 88: 100-113.
18. Martin, S. B., Mueller, J. D., Saunders, J. A., and joens, W 11994. A survey of South Carolina cotton fields for plant parasitic nematodes. Plant Disease 78:717-719.
19. Maraun, M., Heethoff, M., Scheu, S., Norton, R. A., Weigmann, G., and Thomas, R. H. 2003. Radiation in sexual and parthenogenetic oribatid mites (Oribatida, Acari) as indicated by genetic divergence of closely related species. Experimental and Applied Acarology 29:265-277. (Pubitemid 38105924)
20. Noe, J. P. 1993. Damage functions and population changes of Hoplolaimus columbus on cotton and soybean. Journal of Nematology 25:440-445.
21. Nyczepir, A. P., and Lewis, S. A. 1979. Relative tolerance of selected soybean cultivare to Hoplolaimus columbus and possible effects of soil temperature. Journal of Nematology 11:27-31.
22. Powers, T. O., Todd, T. C., Bumell, A. M., Murray, C. B., Fleming, C. C., Szalanski, A. L., Adams, B. A., and Harris, T. S. 1997. The rDNA internal transcribed spacer region as a taxonomie marker for nematodes. Journal of Nematology 29:441-450. (Pubitemid 127362948)
23. Sher, S. A. 1963. Revision of the Hoplolaiminae (Nematoda) II. Hoplolaimus Daday, 1905 and Aorolaimus n. gen. Nematologica 9:267-295.
24. Siddiqi, M. R. 2000. Tylenchida parasites of plants andinsects, 2nd edition, Wallingford UK. CABI Publishing, 833 pp.
25. Subbotin, S. A., Halford, P. D., Warry, A., and Perry, R. N. 2000. Variations in ribosomal DNA sequences and phylogeny of Globodera parasiting solanaceous plants. Nematology 2:591-604.
26. Szalanski, A. L., Sui, D., Harris, T. S., and Powers, T. O. 1997. Identification of cyst nematodes of agronomic and regulatory concern with PCR-RFLP of ITS1. Journal of Nematology 29:255-267. (Pubitemid 27503179)
27. Trudgill, D. L. 1997. Parthenogenetic root-knot nematodes (Meloidogyne spp. how these biotrophic endoparasites can have such an enormous host ranges?. Plant Padiology 46:26-32.
28. Vogler, A. P., and DeSalle, R. 1994. Evolution and phylogenetic information content of ITSl region in the Tiger Beede Cicindela dorsalis. Molecular Biology and Evolution 11:393-405.
29. Zheng, J., Subbotin, S. A., Waeyenberge, L., and Moens, M. 2000. Molecular characterization of Chinese Heterodera giyceims and H. avenae populations based on RFLPs and sequences of rDNA-ITS regions. Russian Journal of Nematology 8:109-113.