Protein core packing by dynamic combinatorial chemistry

Journal of the American Chemical Society

Volumn 132, Issue 26, 2010, Pages 8894-8896

  Roy, Liton ^a   Case, Martin A ^a  

^a UNIVERSITY OF VERMONT   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; ASSOCIATION REACTIONS; BIOASSAY; BIOCHIPS; ORGANIC ACIDS; SURFACE CHEMISTRY;

AMINO ACID SEQUENCE; AQUEOUS SOLUTIONS; DYNAMIC COMBINATORIAL CHEMISTRY; DYNAMIC COMBINATORIAL LIBRARY; HYDROPHOBIC CORE; HYDROPHOBIC RESIDUES; HYDROPHOBIC SURFACES; PROTEIN CORE; SELF-ASSOCIATIONS;

HYDROPHOBICITY;

ALANINE; GLYCINE; ISOLEUCINE; LEUCINE; PHENYLALANINE; VALINE; PROTEIN;

AMINO ACID SEQUENCE; AQUEOUS SOLUTION; ARTICLE; COMBINATORIAL CHEMISTRY; COMBINATORIAL LIBRARY; EX VIVO STUDY; HYDROPHOBICITY; MACROMOLECULE; PROTEIN FOLDING; PROTEIN STABILITY; SURFACE PROPERTY; CHEMISTRY; METABOLISM; MOLECULAR GENETICS; PROCEDURES; PROTEIN MULTIMERIZATION; PROTEIN QUATERNARY STRUCTURE; THERMODYNAMICS;

AMINO ACID SEQUENCE; COMBINATORIAL CHEMISTRY TECHNIQUES; MOLECULAR SEQUENCE DATA; PROTEIN FOLDING; PROTEIN MULTIMERIZATION; PROTEIN STABILITY; PROTEIN STRUCTURE, QUATERNARY; PROTEINS; THERMODYNAMICS;

EID: 77954265366     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja1029717     Document Type: Article

References (34)

1. Park, S., Yang, X., and Saven, J. G. Curr. Opin. Struct. Biol. 2004, 14, 487-494
2. Dantas, G., Kuhlman, B., Callender, D., Wong, M., and Baker, D. J. Mol. Biol. 2003, 332, 449-460
3. Mendes, J., Guerois, R., and Serrano, L. Curr. Opin. Struct. Biol. 2002, 12, 441-446
4. Street, A. G. and Mayo, S. L. Struct. Folding Des. 1999, 7, R105-R109
5. DeGrado, W. F., Summa, C. M., Pavone, V., and Nastri, F. Annu. Rev. Biochem. 1999, 68, 779-819
6. Chockalingam, K., Lu, H. D., and Banta, S. Anal. Biochem. 2009, 388, 122-127
7. Jumawid, M. T., Takahashi, T., Yamazaki, T., Ashigai, H., and Mihara, H. Protein Sci. 2009, 18, 384-398
8. Graziano, J. J., Liu, W. S., Perera, R., Geierstanger, B. H., Lesley, S. A., and Schultz, P. G. J. Am. Chem. Soc. 2008, 130, 176-185
9. Wunderlich, M. and Schmid, F. X. J. Mol. Biol. 2006, 363, 545-557
10. Campbell-Valois, F. X., Tarassov, K., and Michnick, S. W. J. Mol. Biol. 2006, 362, 151-171
11. Benitez-Cardoza, C. G., Stott, K., Hirshberg, M., Went, H. M., Woolfson, D. N., and Jackson, S. E. Biochemistry 2004, 43, 5195-5203
12. Feng, H. Q. and Bai, Y. W. Proteins: Struct., Funct., Bioinf. 2004, 56, 426-429
13. Ventura, S. and Serrano, L. Proteins: Struct., Funct., Bioinf. 2004, 56, 1-10
14. Magliery, T. J. and Regan, L. Eur. J. Biochem. 2004, 271, 1595-1608
15. Matsuura, T., Ernst, A., Zechel, D. L., and Pluckthun, A. ChemBioChem 2004, 5, 177-182
16. Roy, S. and Hecht, M. H. Biochemistry 2000, 39, 4603-4607
17. Corbett, P. T., Leclaire, J., Vial, L., West, K. R., Wietor, J. L., Sanders, J. K. M., and Otto, S. Chem. Rev. 2006, 106, 3652-3711
18. Hadley, E. B., Testa, O. D., Woolfson, D. N., and Gellman, S. H. Proc. Natl. Acad. Sci. U.S.A. 2008, 105, 530-535
19. Case, M. A. and McLendon, G. L. J. Am. Chem. Soc. 2000, 122, 8089-8090
20. Doerr, A. J., Case, M. A., Pelczer, I., and McLendon, G. L. J. Am. Chem. Soc. 2004, 126, 4192-4198
21. Lieberman, M., Tabet, M., and Sasaki, T. J. Am. Chem. Soc. 1994, 116, 5035-5044
22. Ghadiri, M. R., Soares, C., and Choi, C. J. Am. Chem. Soc. 1992, 114, 825-831
23. Roy, L. and Case, M. A. Chem. Commun. 2009, 192-194
24. Ghosh, P. B. and Whitehouse, M. W. Biochem. J. 1968, 108, 155-156
25. Furka, A., Sebestyen, F., Asgedom, M., and Dibo, G. Int. J. Pept. Protein Res. 1991, 37, 487-493
26. Cooper, H. J., Case, M. A., McLendon, G. L., and Marshall, A. G. J. Am. Chem. Soc. 2003, 125, 5331-5339
27. Dublin, S. N. and Conticello, V. P. J. Am. Chem. Soc. 2008, 130, 49-81
28. Kammerer, R. A., Kostrewa, D., Progias, P., Honnappa, S., Avila, D., Lustig, A., Winkler, F. K., Pieters, J., and Steinmetz, M. O. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 13891-13896
29. Zimenkov, Y., Conticello, V. P., Guo, L., and Thiyagarajan, P. Tetrahedron 2004, 60, 7237-7246
30. Potekhin, S. A., Melnik, T. N., Popov, V., Lanina, N. F., Vazina, A. A., Rigler, P., Verdini, A. S., Corradin, G., and Kajava, A. V. Chem. Biol. 2001, 8, 1025-1032
31. Pandya, M. J., Spooner, G. M., Sunde, M., Thorpe, J. R., Rodger, A., and Woolfson, D. N. Biochemistry 2000, 39, 8728-8734
32. Ogihara, N. L., Weiss, M. S., DeGrado, W. F., and Eisenberg, D. Protein Sci. 1997, 6, 80-88
33. Krylov, D., Mikhailenko, I., and Vinson, C. EMBO J. 1994, 13, 2849-2861
34. Case, M. A., Ghadiri, M. R., Mutz, M. W., and McLendon, G. L. Chirality 1998, 10, 35-40