메뉴 건너뛰기




Volumn 38, Issue SUPPL. 2, 2010, Pages

CCancer: A bird's eye view on gene lists reported in cancer-related studies

Author keywords

[No Author keywords available]

Indexed keywords

APPLICATION SERVICE PROVIDER; ARTICLE; BIOINFORMATICS; CANCER RESEARCH; CONTENT ANALYSIS; DATA MINING; DATA SYNTHESIS; GENETIC DATABASE; HUMAN COMPUTER INTERACTION; INFORMATION RETRIEVAL; INFORMATION STORAGE; MALIGNANT NEOPLASTIC DISEASE; PEER REVIEW; PRIORITY JOURNAL; PUBLICATION; CELL AGING; COMPUTER PROGRAM; GENE EXPRESSION REGULATION; GENETICS; HUMAN; INTERNET; MONTE CARLO METHOD; NEOPLASM; TUMOR GENE;

EID: 77954252774     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq515     Document Type: Article
Times cited : (27)

References (28)
  • 1
    • 65549112285 scopus 로고    scopus 로고
    • High-throughput cellular microarray platforms: applications in drug discovery, toxicology and stem cell research
    • Fernandes,T.G., Diogo,M.M., Clark,D.S., Dordick,J.S. and Cabral,J.M. (2009) High-throughput cellular microarray platforms: applications in drug discovery, toxicology and stem cell research. Trends Biotechnol., 27, 342-349.
    • (2009) Trends Biotechnol. , vol.27 , pp. 342-349
    • Fernandes, T.G.1    Diogo, M.M.2    Clark, D.S.3    Dordick, J.S.4    Cabral, J.M.5
  • 2
    • 66149158211 scopus 로고    scopus 로고
    • Saccharide microarrays for high-throughput interrogation of glycan-protein binding interactions
    • Powell,A.K., Zhi,Z.L. and Turnbull,J.E. (2009) Saccharide microarrays for high-throughput interrogation of glycan-protein binding interactions. Methods Mol. Biol., 534, 313-329.
    • (2009) Methods Mol. Biol. , vol.534 , pp. 313-329
    • Powell, A.K.1    Zhi, Z.L.2    Turnbull, J.E.3
  • 3
    • 51049110331 scopus 로고    scopus 로고
    • Linking genes to literature: text mining, information extraction, and retrieval applications for biology
    • Krallinger,M., Valencia,A. and Hirschman,L. (2008) Linking genes to literature: text mining, information extraction, and retrieval applications for biology. Genome Biol., 9(Suppl. 2), S8.
    • (2008) Genome Biol. , vol.9 , Issue.SUPPL 2
    • Krallinger, M.1    Valencia, A.2    Hirschman, L.3
  • 4
    • 48449088232 scopus 로고    scopus 로고
    • PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites
    • Cheng,D., Knox,C., Young,N., Stothard,P., Damaraju,S. and Wishart,D.S. (2008) PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites. Nucleic Acids Res., 36, W399-W405.
    • (2008) Nucleic Acids Res. , vol.36
    • Cheng, D.1    Knox, C.2    Young, N.3    Stothard, P.4    Damaraju, S.5    Wishart, D.S.6
  • 6
    • 39849091039 scopus 로고    scopus 로고
    • MeInfoText: associated gene methylation and cancer information from text mining
    • Fang,Y.C., Huang,H.C. and Juan,H.F. (2008) MeInfoText: associated gene methylation and cancer information from text mining. BMC Bioinformatics, 9, 22.
    • (2008) BMC Bioinformatics , vol.9 , pp. 22
    • Fang, Y.C.1    Huang, H.C.2    Juan, H.F.3
  • 9
    • 65249136464 scopus 로고    scopus 로고
    • PLIPS, an automatically collected database of protein lists reported by proteomics studies
    • Antonov,A.V., Dietmann,S., Wong,P., Igor,R. and Mewes,H.W. (2009) PLIPS, an automatically collected database of protein lists reported by proteomics studies. J. Proteome. Res., 8, 1193-1197.
    • (2009) J. Proteome. Res. , vol.8 , pp. 1193-1197
    • Antonov, A.V.1    Dietmann, S.2    Wong, P.3    Igor, R.4    Mewes, H.W.5
  • 10
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
    • Huang,d.W., Sherman,B.T. and Lempicki,R.A. (2009) Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res., 37, 1-13.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1-13
    • Huang, d.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 11
    • 62549099082 scopus 로고    scopus 로고
    • The DICS repository: module-assisted analysis of disease-related gene lists
    • Dietmann,S., Georgii,E., Antonov,A., Tsuda,K. and Mewes,H.W. (2009) The DICS repository: module-assisted analysis of disease-related gene lists. Bioinformatics, 25, 830-831.
    • (2009) Bioinformatics , vol.25 , pp. 830-831
    • Dietmann, S.1    Georgii, E.2    Antonov, A.3    Tsuda, K.4    Mewes, H.W.5
  • 13
    • 48449095135 scopus 로고    scopus 로고
    • ProfCom: a web tool for profiling the complex functionality of gene groups identified from high-throughput data
    • Antonov,A.V., Schmidt,T., Wang,Y. and Mewes,H.W. (2008) ProfCom: a web tool for profiling the complex functionality of gene groups identified from high-throughput data. Nucleic Acids Res., 36, W347-W351.
    • (2008) Nucleic Acids Res. , vol.36
    • Antonov, A.V.1    Schmidt, T.2    Wang, Y.3    Mewes, H.W.4
  • 14
    • 67849126820 scopus 로고    scopus 로고
    • GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists
    • Antonov,A.V., Dietmann,S., Wong,P., Lutter,D. and Mewes,H.W. (2009) GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists. Nucleic Acids Res., 37, W323-W328.
    • (2009) Nucleic Acids Res. , vol.37
    • Antonov, A.V.1    Dietmann, S.2    Wong, P.3    Lutter, D.4    Mewes, H.W.5
  • 16
    • 60849114746 scopus 로고    scopus 로고
    • KEGG spider: interpretation of genomics data in the context of the global gene metabolic network
    • Antonov,A.V., Dietmann,S. and Mewes,H.W. (2008) KEGG spider: interpretation of genomics data in the context of the global gene metabolic network. Genome Biol., 9, R179.
    • (2008) Genome Biol. , vol.9
    • Antonov, A.V.1    Dietmann, S.2    Mewes, H.W.3
  • 17
    • 66449132301 scopus 로고    scopus 로고
    • PPI spider: a tool for the interpretation of proteomics data in the context of protein-protein interaction networks
    • Antonov,A.V., Dietmann,S., Rodchenkov,I. and Mewes,H.W. (2009) PPI spider: a tool for the interpretation of proteomics data in the context of protein-protein interaction networks. Proteomics, 9, 2740-2749.
    • (2009) Proteomics , vol.9 , pp. 2740-2749
    • Antonov, A.V.1    Dietmann, S.2    Rodchenkov, I.3    Mewes, H.W.4
  • 22
    • 24744453768 scopus 로고    scopus 로고
    • Identification of novel p53 target genes in ionizing radiation response
    • Jen,K.Y. and Cheung,V.G. (2005) Identification of novel p53 target genes in ionizing radiation response. Cancer Res., 65, 7666-7673.
    • (2005) Cancer Res. , vol.65 , pp. 7666-7673
    • Jen, K.Y.1    Cheung, V.G.2
  • 23
    • 50649106648 scopus 로고    scopus 로고
    • Cathepsin D-many functions of one aspartic protease
    • Benes,P., Vetvicka,V. and Fusek,M. (2008) Cathepsin D-many functions of one aspartic protease. Crit Rev. Oncol. Hematol., 68, 12-28.
    • (2008) Crit Rev. Oncol. Hematol. , vol.68 , pp. 12-28
    • Benes, P.1    Vetvicka, V.2    Fusek, M.3
  • 24
    • 61449117010 scopus 로고    scopus 로고
    • Simultaneous expression of Cathepsins B and K in pulmonary adenocarcinomas and squamous cell carcinomas predicts poor recurrence-free and overall survival
    • Cordes,C., Bartling,B., Simm,A., Afar,D., Lautenschlager,C., Hansen,G., Silber,R.E., Burdach,S. and Hofmann,H.S. (2009) Simultaneous expression of Cathepsins B and K in pulmonary adenocarcinomas and squamous cell carcinomas predicts poor recurrence-free and overall survival. Lung Cancer, 64, 79-85.
    • (2009) Lung Cancer , vol.64 , pp. 79-85
    • Cordes, C.1    Bartling, B.2    Simm, A.3    Afar, D.4    Lautenschlager, C.5    Hansen, G.6    Silber, R.E.7    Burdach, S.8    Hofmann, H.S.9
  • 25
    • 77950281870 scopus 로고    scopus 로고
    • Mining protein lists from proteomics studies: applications for drug discovery
    • Antonov,A.V. (2010) Mining protein lists from proteomics studies: applications for drug discovery. Expert Opin. Drug Discovery, 5, 322-331.
    • (2010) Expert Opin. Drug Discovery , vol.5 , pp. 322-331
    • Antonov, A.V.1
  • 26
    • 70349972376 scopus 로고    scopus 로고
    • Acid elution and one-dimensional shotgun analysis on an Orbitrap mass spectrometer: an application to drug affinity chromatography
    • Fernbach,N.V., Planyavsky,M., Muller,A., Breitwieser,F.P., Colinge,J., Rix,U. and Bennett,K.L. (2009) Acid elution and one-dimensional shotgun analysis on an Orbitrap mass spectrometer: an application to drug affinity chromatography. J. Proteome. Res., 8, 4753-4765.
    • (2009) J. Proteome. Res. , vol.8 , pp. 4753-4765
    • Fernbach, N.V.1    Planyavsky, M.2    Muller, A.3    Breitwieser, F.P.4    Colinge, J.5    Rix, U.6    Bennett, K.L.7
  • 28
    • 43249112539 scopus 로고    scopus 로고
    • Activation of MAP kinase signaling through ERK5 but not ERK1 expression is associated with lymph node metastases in oral squamous cell carcinoma (OSCC)
    • Sticht,C., Freier,K., Knopfle,K., Flechtenmacher,C., Pungs,S., Hofele,C., Hahn,M., Joos,S. and Lichter,P. (2008) Activation of MAP kinase signaling through ERK5 but not ERK1 expression is associated with lymph node metastases in oral squamous cell carcinoma (OSCC). Neoplasia, 10, 462-470.
    • (2008) Neoplasia , vol.10 , pp. 462-470
    • Sticht, C.1    Freier, K.2    Knopfle, K.3    Flechtenmacher, C.4    Pungs, S.5    Hofele, C.6    Hahn, M.7    Joos, S.8    Lichter, P.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.