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Volumn 26, Issue 12, 2010, Pages 1500-1505

Supersplat-spliced RNA-seq alignment

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; BRACHYPODIUM DISTACHYON; DICOTYLEDONEAE;

EID: 77954197428     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq206     Document Type: Article
Times cited : (34)

References (10)
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  • 2
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    • Optimal spliced alignments of short sequence reads
    • De Bona, F. et al. (2008) Optimal spliced alignments of short sequence reads. BMC Bioinformatics, 24, i174.
    • (2008) BMC Bioinformatics , vol.24
    • De Bona, F.1
  • 3
    • 74949084336 scopus 로고    scopus 로고
    • Genome wide mapping of alternative splicing inArabidopsis thaliana
    • Filichkin, S.A. et al. (2010) Genome wide mapping of alternative splicing inArabidopsis thaliana. Genome Res., 20, 45-58.
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    • Filichkin, S.A.1
  • 4
    • 73949090104 scopus 로고    scopus 로고
    • Applications of ultra high throughput sequencing in plants
    • Fox, S. et al. (2009) Applications of ultra high throughput sequencing in plants. Plant Syst. Biol., 553, 79-108.
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    • Fox, S.1
  • 5
    • 33745617710 scopus 로고    scopus 로고
    • A fast and symmetric DUST implementation to mask low-complexity DNA sequences
    • Morgulis, A. et al. (2006) A fast and symmetric DUST implementation to mask low-complexity DNA sequences. J. Comput. Biol., 13, 1028-1040.
    • (2006) J. Comput. Biol. , vol.13 , pp. 1028-1040
    • Morgulis, A.1
  • 6
    • 53649106195 scopus 로고    scopus 로고
    • Next-generation DNA sequencing
    • Shendure, J. and Ji, H. (2008) Next-generation DNA sequencing. Nat. Biotechnol., 26, 1135-1145.
    • (2008) Nat. Biotechnol. , vol.26 , pp. 1135-1145
    • Shendure, J.1    Ji, H.2
  • 7
    • 47649124124 scopus 로고    scopus 로고
    • A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
    • Sultan, M. et al. (2008) A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. Science, 321, 956-960.
    • (2008) Science , vol.321 , pp. 956-960
    • Sultan, M.1
  • 8
    • 76749150030 scopus 로고    scopus 로고
    • Genome sequencing and analysis of the model grass Brachypodium distachyon
    • The International Brachypodium Initiative
    • The International Brachypodium Initiative (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463, 763-768.
    • (2010) Nature , vol.463 , pp. 763-768
  • 9
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: discovering splice junctions with RNA-Seq
    • Trapnell, C. et al. (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics, 25, 1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1
  • 10
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    • RNA-Seq: a revolutionary tool for transcriptomics
    • Wang, Z. et al. (2009) RNA-Seq: a revolutionary tool for transcriptomics. Nat. Rev. Genet., 10, 57-63.
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    • Wang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.