-
1
-
-
3142780737
-
Solexa ltd.
-
S. Bennet. Solexa ltd. Pharmacogenomics, 5(4):433-438, 2004.
-
(2004)
Pharmacogenomics
, vol.5
, Issue.4
, pp. 433-438
-
-
Bennet, S.1
-
2
-
-
43149086380
-
ALLPATHS: De novo assembly of whole-genome shotgun microreads
-
J. Butler, I. MacCallum, M. Kleber, I.A. Shlyakhter, M.K. Belmonte, E.S. Lander, C.N. Nusbaum, and D.B. Jaffe. ALLPATHS: De novo assembly of whole-genome shotgun microreads. Genome Research, 18:810-820, 2008.
-
(2008)
Genome Research
, vol.18
, pp. 810-820
-
-
Butler, J.1
MacCallum, I.2
Kleber, M.3
Shlyakhter, I.A.4
Belmonte, M.K.5
Lander, E.S.6
Nusbaum, C.N.7
Jaffe, D.B.8
-
3
-
-
39049156065
-
Short fragment assembly of bacterial genomes
-
M.J. Chaisson and P.A. Pevzner. Short fragment assembly of bacterial genomes. Genome Research, pages 18:324-330, 2008.
-
(2008)
Genome Research
, vol.18
, pp. 324-330
-
-
Chaisson, M.J.1
Pevzner, P.A.2
-
4
-
-
35948929094
-
SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing
-
J.C. Dohm, C. Lottaz, T. Borodina, and H. Himmelbauer. SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing. Genome Research, 17:1697-1706, 2007.
-
(2007)
Genome Research
, vol.17
, pp. 1697-1706
-
-
Dohm, J.C.1
Lottaz, C.2
Borodina, T.3
Himmelbauer, H.4
-
5
-
-
0003889908
-
-
Technical Report CS-TR-3670 and UMIACS-TR-96-154, College Park, MD
-
D.R. Helman, J. JaJa', and D.A. Bader. A new deterministic parallel sorting algorithm with an experimental evaluation. Technical Report CS-TR-3670 and UMIACS-TR-96-154, College Park, MD, 1996.
-
(1996)
A New Deterministic Parallel Sorting Algorithm with An Experimental Evaluation
-
-
Helman, D.R.1
JaJa, J.2
Bader, D.A.3
-
6
-
-
43149085041
-
De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer
-
D. Hernandez, P. Francois, L. Farinelli, M. Osteras, and J. Schrenzel. De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer. Genome Research, 18:802-809, 2008.
-
(2008)
Genome Research
, vol.18
, pp. 802-809
-
-
Hernandez, D.1
Francois, P.2
Farinelli, L.3
Osteras, M.4
Schrenzel, J.5
-
7
-
-
68249091673
-
Crystallizing short-read assemblies around lone Sanger reads
-
S. Hossain, N. Azimi, and S. Skiena. Crystallizing short-read assemblies around lone Sanger reads. Bioinformatics, 2009.
-
(2009)
Bioinformatics
-
-
Hossain, S.1
Azimi, N.2
Skiena, S.3
-
11
-
-
68249110620
-
Assembly of large genomes from paired short reads
-
B.G. Jackson, P.S. Schnable, and S. Aluru. Assembly of large genomes from paired short reads. In Proc. 1st International Conference on Bioinformatics and Computational Biology, volume 5462, pages 30-43, 2009.
-
(2009)
Proc. 1st International Conference on Bioinformatics and Computational Biology
, vol.5462
, pp. 30-43
-
-
Jackson, B.G.1
Schnable, P.S.2
Aluru, S.3
-
13
-
-
24044455869
-
Genome sequencing in open microfabricated high density picoliter reactors
-
M. Margulies and M. Egholm. Genome sequencing in open microfabricated high density picoliter reactors. Nature, 437(7054):376-380, 2005.
-
(2005)
Nature
, vol.437
, Issue.7054
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
-
14
-
-
47249147947
-
Ab initio whole genome shotgun assembly with mated short reads
-
P. Medvedev and M. Brudno. Ab initio whole genome shotgun assembly with mated short reads. In Lecture Notes in Computer Science, volume 4955, pages 50-64, 2008.
-
(2008)
Lecture Notes in Computer Science
, vol.4955
, pp. 50-64
-
-
Medvedev, P.1
Brudno, M.2
-
15
-
-
27544497879
-
The fragment assembly string graph
-
E.W. Myers. The fragment assembly string graph. Bioinformatics, 21:ii79-ii85, 2005.
-
(2005)
Bioinformatics
, vol.21
-
-
Myers, E.W.1
-
17
-
-
0004865129
-
Random data accesses on a coarse-grained parallel machine II. One-to-many and many-to-one mappings
-
DOI 10.1006/jpdc.1997.1315, PII S0743731597913150
-
R.V. Shankar and S. Ranka. Random data accesses on a coarse-grained parallel machine. II. one-to-many and many-to-one mappings. Journal of Parallel and Distributed Computing, 44(1):24-34, 1997. (Pubitemid 127340826)
-
(1997)
Journal of Parallel and Distributed Computing
, vol.44
, Issue.1
, pp. 24-34
-
-
Shankar, R.V.1
Ranka, S.2
-
19
-
-
66449136667
-
ABySS: A parallel assembler for short read sequence data
-
Preprint
-
J.T. Simpson, K. Wong, S.D. Jackman, J.E. Schein, S.J. Jones, and I. Birol. ABySS: a parallel assembler for short read sequence data. Genome Research, Preprint, 2009.
-
(2009)
Genome Research
-
-
Simpson, J.T.1
Wong, K.2
Jackman, S.D.3
Schein, J.E.4
Jones, S.J.5
Birol, I.6
-
20
-
-
33847307402
-
Assembling millions of short DNA sequences using SSAKE
-
R.L. Warren, G.G. Sutton, S.J.M. Jones, and R.A. Holt. Assembling millions of short DNA sequences using SSAKE. Bioinformatics, 23:500-501, 2007.
-
(2007)
Bioinformatics
, vol.23
, pp. 500-501
-
-
Warren, R.L.1
Sutton, G.G.2
Jones, S.J.M.3
Holt, R.A.4
-
21
-
-
77954020169
-
Helicos biosciences enters molecular diagnostics collaboration with renowned research center to sequence cancer-associated genes
-
Business Wire. Helicos biosciences enters molecular diagnostics collaboration with renowned research center to sequence cancer-associated genes. Genetic Engineering and Biotechnology News, 2008.
-
(2008)
Genetic Engineering and Biotechnology News
-
-
Wire, B.1
-
22
-
-
43149115851
-
Algorithms for de novo short read assembly using de Bruijn graphs
-
D. Zerbino and E. Birney. Velvet: Algorithms for de novo short read assembly using de Bruijn graphs. Genome Research, 18:821-829, 2008.
-
(2008)
Genome Research
, vol.18
, pp. 821-829
-
-
Zerbino, D.1
Birney. Velvet, E.2
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