Identification of a cellular factor that modulates HIV-1 programmed ribosomal frameshifting

Journal of Biological Chemistry

Volumn 285, Issue 26, 2010, Pages 19776-19784

  Kobayashi, Yoshifumi ^a   Zhuang, Jianling ^a   Peltz, Stuart ^b   Dougherty, Joseph ^a  

^a RUTGERS ROBERT WOOD JOHNSON MEDICAL SCHOOL   (United States)

^b PTC THERAPEUTICS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTI-VIRAL DRUGS; CELLULAR FACTORS; CIS-ACTING ELEMENT; DOWN-REGULATION; FRAMESHIFT; HUMAN IMMUNODEFICIENCY VIRUS TYPE-1; IN-CELL; INHIBITORY EFFECT; LUCIFERASE REPORTER SYSTEM; MAMMALIAN CELLS; RELEASE FACTORS; RETICULOCYTE LYSATES; WIDE SCREEN;

GENE EXPRESSION; MAMMALS;

VIRUSES;

EUKARYOTIC RELEASE FACTOR 1; GAG PROTEIN; LUCIFERASE; POL PROTEIN; PROTOZOAL PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; CODON; CONTROLLED STUDY; DOWN REGULATION; GENETIC ANALYSIS; HUMAN IMMUNODEFICIENCY VIRUS 1; NONHUMAN; OPEN READING FRAME; PLASMID; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN DEPLETION; PROTEIN SYNTHESIS; REPORTER GENE; RETICULOCYTE; RIBOSOMAL FRAMESHIFTING; RNA INTERFERENCE; VIRUS REPLICATION; YEAST;

ANIMALS; BLOTTING, WESTERN; CELL LINE; FRAMESHIFTING, RIBOSOMAL; GAG GENE PRODUCTS, HUMAN IMMUNODEFICIENCY VIRUS; HELA CELLS; HIV-1; HUMANS; MUTATION; PEPTIDE TERMINATION FACTORS; POL GENE PRODUCTS, HUMAN IMMUNODEFICIENCY VIRUS; PROTEIN BIOSYNTHESIS; RABBITS; RETICULOCYTES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA INTERFERENCE; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; VIRUS REPLICATION;

EUKARYOTA; HUMAN IMMUNODEFICIENCY VIRUS 1; MAMMALIA; ORYCTOLAGUS CUNICULUS; REPLICATION COMPETENT VIRUSES;

EID: 77953806388     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.085621     Document Type: Article

References (49)

1. Hayes, S., and Bull, H. J. (1999) Acta Biochim. Pol. 46, 879-884
2. Hung, M., Patel, P., Davis, S., and Green, S. R. (1998) J. Virol. 72, 4819-4824
3. Shigemoto, K., Brennan, J., Walls, E., Watson, C. J., Stott, D., Rigby, P. W., and Reith, A. D. (2001) Nucleic Acids Res. 29, 4079-4088
4. Tan, M., Liang, A., Brünen-Nieweler, C., and Heckmann, K. (2001) J. Eukaryot. Microbiol. 48, 575-582
5. Vimaladithan, A., and Farabaugh, P. J. (1998) Methods Mol. Biol. 77, 399-411
6. Freed, E. O. (2001) Somatic Cell Mol. Genet. 26, 13-33
7. Frankel, A. D., and Young, J. A. (1998) Annu. Rev. Biochem. 67, 1-25
8. Bidou, L., Stahl, G., Grima, B., Liu, H., Cassan, M., and Rousset, J. P. (1997) RNA 3, 1153-1158
9. Jacks, T., Power, M. D., Masiarz, F. R., Luciw, P. A., Barr, P. J., and Varmus, H. E. (1988) Nature 331, 280-283
10. Wilson, W., Braddock, M., Adams, S. E., Rathjen, P. D., Kingsman, S. M., and Kingsman, A. J. (1988) Cell 55, 1159-1169
11. Dulude, D., Baril, M., and Brakier-Gingras, L. (2002) Nucleic Acids Res. 30, 5094-5102
12. Kollmus, H., Honigman, A., Panet, A., and Hauser, H. (1994) J. Virol. 68, 6087-6091
13. Paulus, C., Ludwig, C., and Wagner, R. (2004) Virology 330, 271-283
14. Park, J., and Morrow, C. D. (1991) J. Virol. 65, 5111-5117
15. Shehu-Xhilaga, M., Crowe, S. M., and Mak, J. (2001) J. Virol. 75, 1834-1841
16. Felsenstein, K. M., and Goff, S. P. (1988) J. Virol. 62, 2179-2182
17. Brierley, I. (1995) J. Gen. Virol. 76, 1885-1892
18. Jacks, T. (1990) Curr. Top. Microbiol. Immunol. 157, 93-124
19. Baril, M., Dulude, D., Gendron, K., Lemay, G., and Brakier-Gingras, L. (2003) RNA 9, 1246-1253
20. Baril, M., Dulude, D., Steinberg, S. V., and Brakier-Gingras, L. (2003) J. Mol. Biol. 331, 571-583
21. Brierley, I., Jenner, A. J., and Inglis, S. C. (1992) J. Mol. Biol. 227, 463-479
22. Dinman, J. D., Icho, T., and Wickner, R. B. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 174-178
23. Dinman, J. D., and Wickner, R. B. (1992) J. Virol. 66, 3669-3676
24. Jacks, T., Madhani, H. D., Masiarz, F. R., and Varmus, H. E. (1988) Cell 55, 447-458
25. Gaudin, C., Mazauric, M. H., Traïkia, M., Guittet, E., Yoshizawa, S., and Fourmy, D. (2005) J. Mol. Biol. 349, 1024-1035
26. Morikawa, S., and Bishop, D. H. (1992) Virology 186, 389-397
27. Staple, D. W., and Butcher, S. E. (2003) Nucleic Acids Res. 31, 4326-4331
28. Staple, D. W., and Butcher, S. E. (2005) J. Mol. Biol. 349, 1011-1023
29. Telenti, A., Martinez, R., Munoz, M., Bleiber, G., Greub, G., Sanglard, D., and Peters, S. (2002) J. Virol. 76, 7868-7873
30. Dinman, J. D., and Berry, M. J. (2007) in Translational Control in Biology and Medicine (Mathews, M. B., Sonenberg, N., and Hershey, J. W. B., eds) pp. 625-654, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
31. Stahl, G., Bidou, L., Rousset, J. P., and Cassan, M. (1995) Nucleic Acids Res. 23, 1557-1560
32. Inge-Vechtomov, S., Zhouravleva, G., and Philippe, M. (2003) Biol. Cell 95, 195-209
33. Ito, K., Ebihara, K., Uno, M., and Nakamura, Y. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 5443-5448
34. Brass, A. L., Dykxhoorn, D. M., Benita, Y., Yan, N., Engelman, A., Xavier, R. J., Lieberman, J., and Elledge, S. J. (2008) Science 319, 921-926
35. Grentzmann, G., Ingram, J. A., Kelly, P. J., Gesteland, R. F., and Atkins, J. F. (1998) RNA 4, 479-486
36. Frolova, L. Y., Tsivkovskii, R. Y., Sivolobova, G. F., Oparina, N. Y., Serpinsky, O. I., Blinov, V. M., Tatkov, S. I., and Kisselev, L. L. (1999) RNA 5, 1014-1020
37. Mumberg, D., Müller, R., and Funk, M. (1995) Gene 156, 119-122
38. Stansfield, I., Kushnirov, V. V., Jones, K. M., and Tuite, M. F. (1997) Eur. J. Biochem. 245, 557-563
39. Willey, R. L., Smith, D. H., Lasky, L. A., Theodore, T. S., Earl, P. L., Moss, B., Capon, D. J., and Martin, M. A. (1988) J. Virol. 62, 139-147
40. Gould, P. S., Bird, H., and Easton, A. J. (2005) BioTechniques 38, 397-400
41. Kushnirov, V. V. (2000) Yeast 16, 857-860
42. Karacostas, V., Wolffe, E. J., Nagashima, K., Gonda, M. A., and Moss, B. (1993) Virology 193, 661-671
43. Tu, C., Tzeng, T. H., and Bruenn, J. A. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 8636-8640
44. Somogyi, P., Jenner, A. J., Brierley, I., and Inglis, S. C. (1993) Mol. Cell. Biol. 13, 6931-6940
45. Hartz, D., McPheeters, D. S., Traut, R., and Gold, L. (1988) Methods Enzymol. 164, 419-425
46. Sachs, M. S., Wang, Z., Gaba, A., Fang, P., Belk, J., Ganesan, R., Amrani, N., and Jacobson, A. (2002) Methods 26, 105-114
47. Horsfield, J. A., Wilson, D. N., Mannering, S. A., Adamski, F. M., and Tate, W. P. (1995) Nucleic Acids Res. 23, 1487-1494
48. Park, H. J., Park, S. J., Oh, D. B., Lee, S., and Kim, Y. G. (2009) FEBS Lett. 583, 665-669
49. Orlova, M., Yueh, A., Leung, J., and Goff, S. P. (2003) Cell 115, 319-331