Population genetic structuring in a rare tropical plant: Idiospermum australiense (Diels) S.T. Blake

Plant Systematics and Evolution

Volumn 286, Issue 3, 2010, Pages 133-139

  Jones, Lynne M ^a   Gadek, Paul A ^a   Harrington, Mark G ^a  

^a JAMES COOK UNIVERSITY   (Australia)

Author keywords

Idiospermum; ISSR; Lowland tropical; Population structure; Rain forests; RAPD

Indexed keywords

IDIOSPERMUM; IDIOSPERMUM AUSTRALIENSE;

EID: 77953480848     PISSN: 03782697     EISSN: 16156110     Source Type: Journal    
DOI: 10.1007/s00606-010-0293-2     Document Type: Article

References (36)

1. Allnutt TR, Newton AC, Lara A, Premoli A, Armesto JJ, Vergara R, Gardner M (1999) Genetic variation in Fitzroya cupressoides (alerce), a threatened South American conifer. Mol Ecol 8: 975-987.
2. Bekessy SA, Allnutt TR, Premoli AC, Lara A, Ennos RA, Burgman MA, Cortes M, Newton AC (2002) Genetic variation in the vulnerable and endemic monkey puzzle tree, detected using RAPDs. Heredity 88: 243-249.
3. Bell KL, Yeates DK, Moritz C, Monteith GB (2004) Molecular phylogeny and biogeography of the dung beetle genus Temnoplectron Westwood (Scarabaeidae: Scarabaeinae) from Australia's wet tropics. Mol Phylogen Evol 31: 741-753.
4. Bussell JD, Waycott M, Chappill JA (2005) Arbitrarily amplified DNA markers as characters for phylogenetic inference. Perspect Plant Ecol Evol Syst 7: 3-26.
5. Doyle JJ, Doyle JS (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19: 11-15.
6. Duke RK, Allan RD, Johnston GA, Mewett KN, Mitrovic AD (1995) Idiospermuline, a trimeric pyrrolidinoindoline alkaloid from the seed of Idiospermum australiense. J Nat Prod 58: 1200-1208.
7. Dutech C, Maggia L, Tardy C, Joly HI, Jarne P (2003) Tracking a genetic signal of extinction-recolonization events in a neotropical tree species: Vouacapoua americana Aublet in French Guiana. Evol 57: 2753-2764.
8. Edwards W, Gadek P, Weber E, Worboys S (2001) Idiosyncratic phenomenon of regeneration from cotyledons in the idiot fruit tree, Idiospermum australiense. Aust Ecol 26: 254-258.
9. Esselman EJ, Jianqiang L, Crawford DJ, Winduss JL, Wolfe AD (1999) Clonal diversity in the rare Calamagrostis porteri ssp. insperata (Poaceae): comparative results for allozymes and random amplified polymorphic DNA (RAPD) and intersimple sequence repeat (ISSR) markers. Mol Ecol 8: 442-451.
10. Frankham R (1996) Relationship of genetic variation to population size in wildlife. Conserv Biol 10: 1500-1508.
11. Frankham R, Ballou JD, Briscoe DA (2004) A primer of conservation genetics. Cambridge University Press, Cambridge.
12. Goosem S (2002) Update of original Wet Tropics of Queensland Nnomination dossier. Wet Tropics of Queensland World Heritage Area, September 2002. Wet Tropics Management Authority, Cairns.
13. House S, Moritz C (1991) The impact of rain forest fragmentation on flora and fauna. In: Goudberg N, Bonell M, Benzarken D (eds) Tropical rain forest research in Australia: present status and future directions for the Institute of tropical rain forest studies: proceedings of a workshop held in Townsville, Australia, 4-6 May 1990. Institute for Tropical Rainforest Studies, Townsville, pp 115-125.
14. Hugall A, Moritz C, Moussalli A, Stanisic J (2002) Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rain forest land snail Gnarosophia bellendenkerensis (Brazier 1875). Proc Natl Acad Sci USA 99: 6112-6117.
15. Kosman E, Leonard KJ (2005) Similarity coefficients for molecular markers in studies of genetic relationships between individuals for haploid, diploid, and polyploid species. Mol Ecol 14: 415-424.
16. Loveless MD, Hamrick JL (1984) Ecological determinants of genetic structure in plant populations. Annu Rev Ecol Syst 15: 65-95.
17. McCune B, Grace JB (2002) Analysis of ecological communities. MJM, Gleneden Beach.
18. Nott JF (2003) The urban geology of Cairns, Queensland, Australia. Quat Int 103: 75-82.
19. Nybom H (2004) Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol Ecol 13: 1143-1155.
20. Nybom H, Bartish IV (2000) Effects of life history traits and sampling strategies on genetic diversity estimate obtained with RAPD markers in plants. Perspect Pl Ecol Evol Syst 3: 93-114.
21. Peakal R, Smouse PE (2005) GenAlEx 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
22. Pye MG, Gadek PA (2004) Genetic diversity, differentiation and conservation in Araucaria bidwillii (Araucariaceae), Australia's Bunya pine. Conserv Genet 5: 619-629.
23. Schneider CJ, Moritz C (1999) Rain forest refugia and evolution in Australia's Wet Tropics. Proc R Soc B Biol Sci 266: 191-196.
24. Schneider CJ, Cunningham M, Moritz C (1998) Comparative phylogeography and the history of endemic vertebrates in the Wet Tropics rain forests of Australia. Mol Ecol 7: 487-498.
25. Schnieder S, Roessli D, Excoffier L (2000) Arlequin ver. 2000: a software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland.
26. Sork VL, Nason J, Campbell DR, Fernandez JF (1999) Landscape approach to historical and contemporary gene flow in plants. Trends Ecol Evol 14: 219-224.
27. Sydes MA, Peakall R (1998) Extensive clonality in the endangered shrub Haloragodendron lucasii (Haloragaceae) revealed by allozymes and RAPDs. Mol Ecol 7: 87-93.
28. Tero N, Aspi J, Siikamaki P, Jakalaniemi A, Tuomi J (2003) Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol Ecol 12: 2073-2085.
29. Webb L, Tracy JG (1981) Australian rain forests, patterns and change. In: Junk W (ed) Ecological biogeography of Australia. Springer, The Hague, pp 607-694.
30. Willmott WF, Stephenson PJ (1989) Rocks and landscapes of the Cairns district. Queensland Department of Mines, Brisbane.
31. Wolfe AD, Xiang Q-Y, Kephart SR (1998) Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable intersimple sequence repeat (ISSR) bands. Mol Ecol 7: 1107-1125.
32. Worboys SJ (1999) Pollination processes and population structure of Idiospermum australiense (Diels) S. T. Blake, a primitive tree of the Queensland Wet Tropics. PhD Dissertation, James Cook University.
33. Worboys SJ (2003) Polycarpelly in Idiospermum australiense (Calycanthaceae). Austrobaileya 6: 553-556.
34. Worboys SJ, Jackes BR (2005) Pollination processes in Idiospermum australiense (Calycanthaceae), an arborescent basal angiosperm of Australia's Tropical Rain Forests. Pl Syst Evol 251: 107-117.
35. Yeh FC, Yang RC, Boyle T, Ye ZH, Mao JX (1999) POPGENE ver 1. 31: genetic data analysis software. Molecular Biology and Biotechnology Centre, University of Alberta, Canada.
36. Zhou S, Renner SS, Wen J (2006) Molecular phylogeny and intra- and intercontinental biogeography of Calycanthaceae. Mol Phylogen Evol 39: 1-15.